prot_H-elongata_contig8852.16374.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8852.16374.1
Unique Nameprot_H-elongata_contig8852.16374.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length649
Homology
BLAST of mRNA_H-elongata_contig8852.16374.1 vs. uniprot
Match: A0A6H5JGV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGV5_9PHAE)

HSP 1 Score: 378 bits (971), Expect = 8.760e-119
Identity = 259/674 (38.43%), Postives = 350/674 (51.93%), Query Frame = 0
Query:    2 IPVPWLFVCCISVVDLASNAYLVETEDFGRLIQRCHFHLAAVAAGDTADLSSLYDLLDWVYESVDAAGPTALPKLLDAGVIDLALNGTESPDSNVSSLCHEMLNVLSSNEHVAAMMAKNPTLRTSVLGEVRRQLFGWKSPWSRDNEDAMDAPDPALDLIPQEGDDEILTPPTRPTSFRHAIHRSRSSGIGDLTGGVGRTNHLGEGDEGPGSXXXXXXXXXXXXXEEFSASIGAEGVDRNEDFGFEADSIGAEDNEDITSEGVVLDPFYSALTLRTLSSVMRASRTVAGMPESPADAFE---SSVSRGWG--------------RKLDLPWPLHVMYGRNDYSGAEG--------DEASRDAA-------EWPLEQKLVGDIAELMLSIGTQGSEEALNVIPFEGHPELGEVGQMELRKALQGLEVASAAFLREASSHPQLVAHLMRRRPLFSLVTVSWKGHSVKAEDWAAEATLNICDAYRRLYSLPAPREKLTSPEVVSVLNRWSKKLMAEEQSGTQAMELGAEYEDQSFVLQAERA-VPPLALSDPLLAATASGIVGVS-GVVWGTLRRWVAWRLAGETFSAISRFALPRALMWAGLRAGLGATAMTATHGPFGFRSQMRYRTLDATRGRRGTLVMSGVRELADLGYLYVVLRLCPYSLLPAFVLNSMLRGE 641
            IP+PWL +     V+    AY VE E    L+QRC+FH+A    G+  +L+SL +LLD V+ SV A GPTALPKLLDAGVI +AL G ESP+++V+ +C+ +L VLS N HVA  M+++P +R  ++GE+RRQ+ GW    S  ++D                               H     +   +G L  G       GEG                       A+  A                            +V+DP +  LTL TLS+VMRASR      +  + A E   + ++R +G               + ++PWP   +YG N+Y GA G        D+ +  A+        WPL++KLV DIAELMLS  +    E    +      ELGEV           LE A+A+ L E S HP+LV  L+RRRPL  LV VS    S+ A   ++EATLNIC+AYRR + LP   E   S E +     W  K +A+E + + + +L     DQ+FV QAER+ +PPL  S  L+    S  VG++ G  WG  RRW+AWR AGETFS +S  +LP  L+ AGLRAGLGATA+ ATHGP GFR Q     LDAT G RGTL MS  REL++L YLY +LRLCPYSLLP+ V+++++  +
Sbjct:  100 IPLPWLALGLFQAVEFGLAAYEVEAEKVDELVQRCNFHIATATIGEAVNLTSLLELLDLVHHSVLAVGPTALPKLLDAGVIGIALRGAESPNTHVAVVCYRILTVLSQNRHVARRMSRDPAIRAVLIGELRRQVKGWNHAGSGADDD-------------------------------HEAEGEKQQRMGGLADG-------GEG-----------------------ATAAARPPPAT----------------------IVVDPIHLTLTLETLSNVMRASRRDINSSKRRSTAEEPGAAGLNRRFGAGGVSGGRTAAGEDEEDEVPWPFRFLYGENNYEGAAGYAYGGGNEDDDTIIASVGGGISGPWPLDRKLVADIAELMLSAASARDSEG--AVARGEDAELGEV-----------LEAAAASSLLEISHHPELVGLLLRRRPLAGLVAVSQD--SMMAAQTSSEATLNICNAYRRCHGLPEASEPKASYEEIIT---WVNKTLAQEWAESPSGDLDTSEADQAFVRQAERSTLPPLPYSSVLINEIMSAGVGMALGFPWGAARRWIAWRRAGETFSVLSTCSLPWVLLRAGLRAGLGATALVATHGPAGFRPQASSWILDATSGSRGTLAMSAARELSELAYLYAILRLCPYSLLPSLVVSAVVGND 672          
BLAST of mRNA_H-elongata_contig8852.16374.1 vs. uniprot
Match: D7G608_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G608_ECTSI)

HSP 1 Score: 287 bits (735), Expect = 1.940e-86
Identity = 189/425 (44.47%), Postives = 246/425 (57.88%), Query Frame = 0
Query:  263 VVLDPFYSALTLRTLSSVMRASR---------TVAGMPESPADAFESSVSRGWGRKL---------DLPWPLHVMYGRNDYSGAEG---DEASRD------------AAEWPLEQKLVGDIAELMLSIGTQGSEEALNVIPFEGHPELGEVGQMELRKALQGLEVASAAFLREASSHPQLVAHLMRRRPLFSLVTVSWKGHSVKAEDWAAEATLNICDAYRRLYSLPAPRE-KLTSPEVVSVLNRWSKKLMAEEQSGTQAMELGAEYEDQSFVLQAERA-VPPLALSDPLLAATASGIVGVS-GVVWGTLRRWVAWRLAGETFSAISRFALPRALMWAGLRAGLGATAMTATHGPFGFRSQMRYRTLDATRGRRGTLVMSGVRELADLGYLYVVLRLCPYSLLPAFVLNSML-RGEAVGA--DAW 648
            +V+DP +  LTL TLS+VMRASR         + A  PE+    +      G G +          ++PWP   +YG N+Y GA G   D  + D            +  WPL++KLV DIAELMLS  +    E    +      ELGEV           LE A+A+ LRE S H +LV  L+RRRPL  LV VS    S+ A   ++EATLNIC+AYRR + LP   E K +  EV++    W  K +A+E +G+ + +L     DQ+FV QAER+ +PP   S  L+    S  VG++ GV WG  RRW+AWR AGETFSA+SR +LPRAL+ AGLRAGLG TA+ ATHGP GFR Q R   LDAT G RGTL MS  RE+++L YLY +LRLCPYSLLP+ V+++++  G   G   D W
Sbjct:   64 IVVDPIHLTLTLETLSNVMRASRRDINSSRRRSTAEEPEAAGLNWRFGAGVGSGGRTAVAGEDEEDEVPWPFRFLYGENNYEGAAGYAHDGGNEDDDTITPSVGGVVSGPWPLDRKLVADIAELMLSAASARDSEG--AVARGEDAELGEV-----------LEAAAASSLREISHHSELVGLLLRRRPLVGLVAVSQD--SMMAAQASSEATLNICNAYRRCHGLPEASEPKASYDEVIT----WVNKTLAQEWAGSPSGDLDTSEADQAFVRQAERSTLPPSPYSSVLINMQMSTGVGMALGVPWGAARRWIAWRRAGETFSALSRLSLPRALLLAGLRAGLGTTALVATHGPAGFRPQARPWILDATSGSRGTLAMSAAREVSELAYLYAILRLCPYSLLPSLVVSAVVWNGHRYGGVVDDW 469          
BLAST of mRNA_H-elongata_contig8852.16374.1 vs. uniprot
Match: D7G609_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G609_ECTSI)

HSP 1 Score: 108 bits (269), Expect = 6.760e-23
Identity = 52/99 (52.53%), Postives = 68/99 (68.69%), Query Frame = 0
Query:    2 IPVPWLFVCCISVVDLASNAYLVETEDFGRLIQRCHFHLAAVAAGDTADLSSLYDLLDWVYESVDAAGPTALPKLLDAGVIDLALNGTESPDSNVSSLC 100
            +P+PWL +     V+    AY VETE    L+QRC+FH+A    G+  +L+SL +LLD V+ SV A GPTALPKLLDAGVI +AL G ESP+++VS  C
Sbjct:  135 VPLPWLALVLFQAVEFGLAAYEVETEKLDELVQRCNFHIATATVGEAVNLTSLQELLDLVHHSVLAVGPTALPKLLDAGVIGIALRGAESPNTHVSKGC 233          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8852.16374.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JGV5_9PHAE8.760e-11938.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G608_ECTSI1.940e-8644.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G609_ECTSI6.760e-2352.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..648
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.541

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8852contigH-elongata_contig8852:3181..8898 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8852.16374.1mRNA_H-elongata_contig8852.16374.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8852 2260..8922 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8852.16374.1 ID=prot_H-elongata_contig8852.16374.1|Name=mRNA_H-elongata_contig8852.16374.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=649bp
MIPVPWLFVCCISVVDLASNAYLVETEDFGRLIQRCHFHLAAVAAGDTAD
LSSLYDLLDWVYESVDAAGPTALPKLLDAGVIDLALNGTESPDSNVSSLC
HEMLNVLSSNEHVAAMMAKNPTLRTSVLGEVRRQLFGWKSPWSRDNEDAM
DAPDPALDLIPQEGDDEILTPPTRPTSFRHAIHRSRSSGIGDLTGGVGRT
NHLGEGDEGPGSSGTAESDGGEEDGEEFSASIGAEGVDRNEDFGFEADSI
GAEDNEDITSEGVVLDPFYSALTLRTLSSVMRASRTVAGMPESPADAFES
SVSRGWGRKLDLPWPLHVMYGRNDYSGAEGDEASRDAAEWPLEQKLVGDI
AELMLSIGTQGSEEALNVIPFEGHPELGEVGQMELRKALQGLEVASAAFL
REASSHPQLVAHLMRRRPLFSLVTVSWKGHSVKAEDWAAEATLNICDAYR
RLYSLPAPREKLTSPEVVSVLNRWSKKLMAEEQSGTQAMELGAEYEDQSF
VLQAERAVPPLALSDPLLAATASGIVGVSGVVWGTLRRWVAWRLAGETFS
AISRFALPRALMWAGLRAGLGATAMTATHGPFGFRSQMRYRTLDATRGRR
GTLVMSGVRELADLGYLYVVLRLCPYSLLPAFVLNSMLRGEAVGADAW*
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