prot_H-elongata_contig88425.16369.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig88425.16369.1 vs. uniprot
Match: A0A0A9YPH4_LYGHE (Copia protein n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9YPH4_LYGHE) HSP 1 Score: 63.9 bits (154), Expect = 1.870e-10 Identity = 29/55 (52.73%), Postives = 44/55 (80.00%), Query Frame = 0
Query: 1 MAKNRFSSRRTRHVDIKHHNVRDAVDGGVVHIEYVLSWEQHADILTKSVDVKTFE 55
+A+NR +S+R +H+DIKHH +R+ VD GV+ + YV + EQ+ADILTK +D ++FE
Sbjct: 280 LARNRENSKRIKHIDIKHHFIREKVDEGVIKLNYVSTSEQNADILTKGLDKQSFE 334
BLAST of mRNA_H-elongata_contig88425.16369.1 vs. uniprot
Match: A0A2K3K827_TRIPR (Gag-pol polyprotein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3K827_TRIPR) HSP 1 Score: 58.2 bits (139), Expect = 1.180e-9 Identity = 27/56 (48.21%), Postives = 40/56 (71.43%), Query Frame = 0
Query: 1 MAKNRFSSRRTRHVDIKHHNVRDAVDGGVVHIEYVLSWEQHADILTKSVDVKTFEK 56
++KN RT+H+DI+HH +RD V+ GVV +E++ + EQ ADI TK++D FEK
Sbjct: 21 ISKNPIQHSRTKHIDIRHHFIRDLVEEGVVKLEHIATEEQLADIFTKALDAVQFEK 76
BLAST of mRNA_H-elongata_contig88425.16369.1 vs. uniprot
Match: A0A1Y1MJE9_PHOPY (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1MJE9_PHOPY) HSP 1 Score: 60.5 bits (145), Expect = 3.530e-9 Identity = 27/50 (54.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query: 6 FSSRRTRHVDIKHHNVRDAVDGGVVHIEYVLSWEQHADILTKSVDVKTFE 55
+RRT+H+DIKHH +RD V+ +HI+Y+ S EQ ADILTKS+ + FE
Sbjct: 928 LETRRTKHIDIKHHYIRDCVESERIHIQYIPSNEQQADILTKSLSLSKFE 977
BLAST of mRNA_H-elongata_contig88425.16369.1 vs. uniprot
Match: A0A6H5KBM6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBM6_9PHAE) HSP 1 Score: 58.9 bits (141), Expect = 1.120e-8 Identity = 27/61 (44.26%), Postives = 43/61 (70.49%), Query Frame = 0
Query: 1 MAKNRFSSRRTRHVDIKHHNVRDAVDGGVVHIEYVLSWEQHADILTKSVDVKTFEKHAKFL 61
+A+N SS R++H+D++HH +R+ + GV+ + +V S EQHADILTK++ FE H F+
Sbjct: 264 LAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLFEVHRDFV 324
BLAST of mRNA_H-elongata_contig88425.16369.1 vs. uniprot
Match: A0A6H5KCG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG6_9PHAE) HSP 1 Score: 58.5 bits (140), Expect = 1.160e-8 Identity = 27/60 (45.00%), Postives = 42/60 (70.00%), Query Frame = 0
Query: 1 MAKNRFSSRRTRHVDIKHHNVRDAVDGGVVHIEYVLSWEQHADILTKSVDVKTFEKHAKF 60
+A+N SS R++H+D++HH +R+ + GV+ + +V S EQHADILTK++ FE H F
Sbjct: 193 LAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRDLFEVHRDF 252
BLAST of mRNA_H-elongata_contig88425.16369.1 vs. uniprot
Match: A0A6H5JRE7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRE7_9PHAE) HSP 1 Score: 58.9 bits (141), Expect = 1.190e-8 Identity = 27/61 (44.26%), Postives = 43/61 (70.49%), Query Frame = 0
Query: 1 MAKNRFSSRRTRHVDIKHHNVRDAVDGGVVHIEYVLSWEQHADILTKSVDVKTFEKHAKFL 61
+A+N SS R++H+D++HH +R+ + GV+ + +V S EQHADILTK++ FE H F+
Sbjct: 320 LAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRNLFEFHRDFV 380
BLAST of mRNA_H-elongata_contig88425.16369.1 vs. uniprot
Match: A0A6H5K9B2_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9B2_9PHAE) HSP 1 Score: 58.9 bits (141), Expect = 1.230e-8 Identity = 27/61 (44.26%), Postives = 43/61 (70.49%), Query Frame = 0
Query: 1 MAKNRFSSRRTRHVDIKHHNVRDAVDGGVVHIEYVLSWEQHADILTKSVDVKTFEKHAKFL 61
+A+N SS R++H+D++HH +R+ + GV+ + +V S EQHADILTK++ FE H F+
Sbjct: 430 LAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLFEVHRDFV 490
BLAST of mRNA_H-elongata_contig88425.16369.1 vs. uniprot
Match: A0A438H3B6_VITVI (Retrovirus-related Pol polyprotein from transposon RE2 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438H3B6_VITVI) HSP 1 Score: 58.5 bits (140), Expect = 1.670e-8 Identity = 31/61 (50.82%), Postives = 41/61 (67.21%), Query Frame = 0
Query: 1 MAKNRFSSRRTRHVDIKHHNVRDAVDGGVVHIEYVLSWEQHADILTKSVDVKTFEKHAKFL 61
++KN RT+HVDI+HH +RD V+ VV +EYV + Q ADILTK +DV FE KF+
Sbjct: 461 ISKNPVLHSRTKHVDIRHHFIRDLVENKVVSLEYVPTEGQIADILTKPLDVSRFESLKKFI 521
BLAST of mRNA_H-elongata_contig88425.16369.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE) HSP 1 Score: 58.5 bits (140), Expect = 1.690e-8 Identity = 27/60 (45.00%), Postives = 42/60 (70.00%), Query Frame = 0
Query: 1 MAKNRFSSRRTRHVDIKHHNVRDAVDGGVVHIEYVLSWEQHADILTKSVDVKTFEKHAKF 60
+A+N SS R++H+D++HH +R+ + GV+ + +V S EQHADILTK++ FE H F
Sbjct: 895 LAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLFEVHRDF 954
BLAST of mRNA_H-elongata_contig88425.16369.1 vs. uniprot
Match: A0A6H5J594_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J594_9PHAE) HSP 1 Score: 58.5 bits (140), Expect = 1.690e-8 Identity = 27/59 (45.76%), Postives = 41/59 (69.49%), Query Frame = 0
Query: 3 KNRFSSRRTRHVDIKHHNVRDAVDGGVVHIEYVLSWEQHADILTKSVDVKTFEKHAKFL 61
KN SS R++H+D++HH +R+ + GV+ + +V S EQHADILTK++ FE H F+
Sbjct: 911 KNPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRNLFEVHRDFV 969 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig88425.16369.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig88425.16369.1 ID=prot_H-elongata_contig88425.16369.1|Name=mRNA_H-elongata_contig88425.16369.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=61bpback to top |