prot_H-elongata_contig88092.16334.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig88092.16334.1
Unique Nameprot_H-elongata_contig88092.16334.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length118
Homology
BLAST of mRNA_H-elongata_contig88092.16334.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 4.600e-28
Identity = 62/118 (52.54%), Postives = 78/118 (66.10%), Query Frame = 0
Query:    1 THIGCCNHLLESTTSIVFNGPGVKKVIALARGLVTRYSTSNQMADWLAQFVQIYLGFEKKVMQDVVTRWSSTCAMVGRLLELRQPIKKHEEADTLESLLTAVDWAVLEMVLSVLEPFM 118
            TH+GC  H LES TS  F GPGV K +ALARG+VTRY+ S+Q +D L Q   I     K V+QDV TRW ST   + RL+ LR+PI +HE  D+   LL   DW VL++V S+L+PFM
Sbjct:   96 THLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQVCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFM 213          
BLAST of mRNA_H-elongata_contig88092.16334.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 8.730e-21
Identity = 49/68 (72.06%), Postives = 57/68 (83.82%), Query Frame = 0
Query:    1 THIGCCNHLLESTTSIVFNGPGVKKVIALARGLVTRYSTSNQMADWLAQFVQIYLGFE-KKVMQDVVT 67
            T IGCCN+ LEST+SIVFNGP VKKV+ LARGLVTRY TS+Q AD L QFV+ YLG + K+V+QDVVT
Sbjct:  132 TQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTSSQAADRLKQFVKTYLGVDNKRVIQDVVT 199          
BLAST of mRNA_H-elongata_contig88092.16334.1 vs. uniprot
Match: UPI0011C11E9C (zinc finger BED domain-containing protein 4-like n=1 Tax=Sparus aurata TaxID=8175 RepID=UPI0011C11E9C)

HSP 1 Score: 66.6 bits (161), Expect = 1.270e-10
Identity = 44/118 (37.29%), Postives = 66/118 (55.93%), Query Frame = 0
Query:    3 IGCCNHLLESTTSI-VFNGPGVKKVIALARGLVTRYSTSNQMADWLAQFVQIYLGFE--KKVMQDVVTRWSSTCAMVGRLLELRQPIKKHEEADTLESLLTAVDWAVLEMVLSVLEPF 117
            +GC  H L+      + +   VK  +A ARG++  +  S  +A    + +Q  LG    K+++QDV TRW+S+  M+  +LELR+ I  +     L S LTA +WA+LE V  VLEPF
Sbjct:  124 LGCFAHSLQLVVKEGLLSQRSVKDALAKARGIIGHFKHS-PLATSRFEDIQRELGATETKRLLQDVATRWNSSFYMIQSMLELRRAISSYGTEHKLPSTLTANEWALLEKVAHVLEPF 240          
BLAST of mRNA_H-elongata_contig88092.16334.1 vs. uniprot
Match: A0A1A8L1F0_9TELE (Uncharacterized protein n=1 Tax=Nothobranchius pienaari TaxID=704102 RepID=A0A1A8L1F0_9TELE)

HSP 1 Score: 59.7 bits (143), Expect = 1.470e-8
Identity = 40/124 (32.26%), Postives = 58/124 (46.77%), Query Frame = 0
Query:    3 IGCCNHLLESTTSIVFNGPGVKKVIALARGLVTRYSTSNQMADWLAQFVQIYLGFEKKVMQDVVTRWSSTCAMVGRLLELRQPI---------KKHEEADTLESLLTAVDWAVLEMVLSVLEPF 117
            + C  H L+   +       V + +A AR LV  +   +Q    L +        E K++QDV TRW+STC M+ RLLE R PI          K  ++ TL+  +T   W V E +  VL+ F
Sbjct:   20 VRCAGHTLQLCVNAALKEDPVARTVAAARRLVGHFKKGHQAKTGLKEKRVQQKAPEHKLIQDVATRWNSTCFMLERLLEQRWPITAILSDPSYSKRSDSSTLD--MTTEQWNVAEDITDVLKLF 141          
BLAST of mRNA_H-elongata_contig88092.16334.1 vs. uniprot
Match: G3PNR8_GASAC (Uncharacterized protein n=1 Tax=Gasterosteus aculeatus TaxID=69293 RepID=G3PNR8_GASAC)

HSP 1 Score: 56.2 bits (134), Expect = 6.560e-7
Identity = 39/120 (32.50%), Postives = 59/120 (49.17%), Query Frame = 0
Query:    4 GCCNHLLESTTSIVFNGPGVKKVIALARGLVTRYSTSNQMADWLAQFVQIYLGFEKKVMQDVVTRWSSTCAMVGRLLELRQPIKK--HEEADTLESL----LTAVDWAVLEMVLSVLEPF 117
            GC  H L+   +     PG++K +  AR LV  +  S   +  L +  Q     E  ++QDV TRW+STC M+   LE R P+     + + T  S     L +  W++LE + +VL PF
Sbjct:  135 GCTGHTLQLVINAALKYPGIEKAVGAARRLVEHFKKSELASSKLREKQQQMNTPEHSLVQDVSTRWNSTCYMIR--LEQRWPVTATLSDSSVTQRSKRYLDLKSDQWSLLEELSTVLRPF 252          
BLAST of mRNA_H-elongata_contig88092.16334.1 vs. uniprot
Match: A0A671UN94_SPAAU (DUF659 domain-containing protein n=1 Tax=Sparus aurata TaxID=8175 RepID=A0A671UN94_SPAAU)

HSP 1 Score: 54.7 bits (130), Expect = 2.990e-6
Identity = 33/85 (38.82%), Postives = 46/85 (54.12%), Query Frame = 0
Query:    3 IGCCNHLLESTTSIVFNGPGVKKVIALARGLVTRYSTSNQMADWLAQFVQIYLGF-EKKVMQDVVTRWSSTCAMVGRLLELRQPI 86
            + C  H L+   S     P + K +  AR LV  +  S ++A    +  Q  +G  EKK++QDV TRW+ST  MV RLLE R P+
Sbjct:  175 VRCAGHTLQLVISHALKHPQITKALGAARCLVEHFKRS-ELASSKLKTKQKQMGIPEKKLIQDVSTRWNSTFHMVTRLLEQRWPL 258          
BLAST of mRNA_H-elongata_contig88092.16334.1 vs. uniprot
Match: A0A671UN90_SPAAU (Dimer_Tnp_hAT domain-containing protein n=3 Tax=Sparus aurata TaxID=8175 RepID=A0A671UN90_SPAAU)

HSP 1 Score: 54.7 bits (130), Expect = 3.100e-6
Identity = 41/120 (34.17%), Postives = 57/120 (47.50%), Query Frame = 0
Query:    5 CCNHLLESTTSIVFNGPGVKKVIALARGLVTRYSTSNQMADWLAQFVQIYLGF-EKKVMQDVVTRWSSTCAMVGRLLELRQPIKKHEEADTLESL------LTAVDWAVLEMVLSVLEPF 117
            C  H L+   S     P + K +  AR LV  +  S ++A    +  Q  +G  EKK++QDV TRW+ST  MV RLLE R P+       T+         L    WA+LE +   L+ F
Sbjct:  177 CAGHTLQLVISHALKHPQITKALGAARCLVEHFKRS-ELASSKLKTKQKQMGIPEKKLIQDVSTRWNSTFHMVTRLLEQRWPLTATLSDPTVTPRGKQHLDLKPDQWALLEELAKALQAF 295          
BLAST of mRNA_H-elongata_contig88092.16334.1 vs. uniprot
Match: UPI00148F8D10 (zinc finger BED domain-containing protein 1-like n=1 Tax=Notolabrus celidotus TaxID=1203425 RepID=UPI00148F8D10)

HSP 1 Score: 54.7 bits (130), Expect = 3.110e-6
Identity = 36/87 (41.38%), Postives = 49/87 (56.32%), Query Frame = 0
Query:    2 HIGCCNHLLESTTSIVFNG-PGVKKVIALARGLVTRYSTSNQMADWLAQFVQIYLGFE-KKVMQDVVTRWSSTCAMVGRLLELRQPI 86
            H  C  H L        +  P V  + A AR LV  + +S    + L Q VQ +LG E KK+MQ+V TRW+ST  M+ RL+ELR+P+
Sbjct:  243 HHICIAHTLNLVVKKALDQHPVVSGIRAKARKLVGYFRSSTTAKEKLTQ-VQFHLGMEQKKLMQEVETRWNSTSLMLQRLVELREPV 328          
BLAST of mRNA_H-elongata_contig88092.16334.1 vs. uniprot
Match: UPI00148FA1C4 (zinc finger BED domain-containing protein 4-like n=1 Tax=Notolabrus celidotus TaxID=1203425 RepID=UPI00148FA1C4)

HSP 1 Score: 54.3 bits (129), Expect = 3.510e-6
Identity = 32/67 (47.76%), Postives = 44/67 (65.67%), Query Frame = 0
Query:   21 PGVKKVIALARGLVTRYSTSNQMADWLAQFVQIYLGFE-KKVMQDVVTRWSSTCAMVGRLLELRQPI 86
            P V  + A AR LV  + +S    + L Q VQ +LG E KK+MQ+V TRW+ST  M+ RL+ELR+P+
Sbjct:  191 PVVSGIRAKARKLVGYFRSSTTAKEKLTQ-VQFHLGMEQKKLMQEVETRWNSTSLMLQRLVELREPV 256          
BLAST of mRNA_H-elongata_contig88092.16334.1 vs. uniprot
Match: UPI0014903A25 (zinc finger BED domain-containing protein 1-like n=1 Tax=Notolabrus celidotus TaxID=1203425 RepID=UPI0014903A25)

HSP 1 Score: 53.9 bits (128), Expect = 5.530e-6
Identity = 32/67 (47.76%), Postives = 44/67 (65.67%), Query Frame = 0
Query:   21 PGVKKVIALARGLVTRYSTSNQMADWLAQFVQIYLGFE-KKVMQDVVTRWSSTCAMVGRLLELRQPI 86
            P V  + A AR LV  + +S    + L Q VQ +LG E KK+MQ+V TRW+ST  M+ RL+ELR+P+
Sbjct:  130 PVVSGIRAKARKLVGYFRSSTTAKEKLTQ-VQFHLGMEQKKLMQEVETRWNSTYLMLQRLVELREPV 195          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig88092.16334.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5JHP9_9PHAE4.600e-2852.54Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A6H5L7Y8_9PHAE8.730e-2172.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI0011C11E9C1.270e-1037.29zinc finger BED domain-containing protein 4-like n... [more]
A0A1A8L1F0_9TELE1.470e-832.26Uncharacterized protein n=1 Tax=Nothobranchius pie... [more]
G3PNR8_GASAC6.560e-732.50Uncharacterized protein n=1 Tax=Gasterosteus acule... [more]
A0A671UN94_SPAAU2.990e-638.82DUF659 domain-containing protein n=1 Tax=Sparus au... [more]
A0A671UN90_SPAAU3.100e-634.17Dimer_Tnp_hAT domain-containing protein n=3 Tax=Sp... [more]
UPI00148F8D103.110e-641.38zinc finger BED domain-containing protein 1-like n... [more]
UPI00148FA1C43.510e-647.76zinc finger BED domain-containing protein 4-like n... [more]
UPI0014903A255.530e-647.76zinc finger BED domain-containing protein 1-like n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46169:SF3coord: 2..117
NoneNo IPR availablePANTHERPTHR46169FAMILY NOT NAMEDcoord: 2..117
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 2..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig88092contigH-elongata_contig88092:1843..2196 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig88092.16334.1mRNA_H-elongata_contig88092.16334.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig88092 1843..2196 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig88092.16334.1 ID=prot_H-elongata_contig88092.16334.1|Name=mRNA_H-elongata_contig88092.16334.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=118bp
THIGCCNHLLESTTSIVFNGPGVKKVIALARGLVTRYSTSNQMADWLAQF
VQIYLGFEKKVMQDVVTRWSSTCAMVGRLLELRQPIKKHEEADTLESLLT
AVDWAVLEMVLSVLEPFM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf