prot_H-elongata_contig879.16319.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig879.16319.1
Unique Nameprot_H-elongata_contig879.16319.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length426
Homology
BLAST of mRNA_H-elongata_contig879.16319.1 vs. uniprot
Match: D8LJN1_ECTSI (Rhomboid domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJN1_ECTSI)

HSP 1 Score: 343 bits (881), Expect = 7.870e-112
Identity = 209/436 (47.94%), Postives = 270/436 (61.93%), Query Frame = 0
Query:    9 MAPGL----RGGMQNFGSGRG-----RHRNPWFIVLGLQLVQKIVDLPRKPPLTLALMAGMTALHLAPEVVNNFLGTGPAVGGLGGFLAESYRRWVSNGYSNHIQELCLLPASMLEAYQRTGALGFRRFFLSAFLHGSERHLYYNMWSFLLKGVSLELDMGTRAYFGLLAFCLVTSQALFLVASWIMLVVFEQPSAMYACTVGFSGVIFALKYVLNRRSPAYTRVMGFKIHTRYAAWLELVLIQFMVPNASFLGHLCGIFAGILYVEVPAVASALNL-VAVSVFGNPRP-SYTYSSGSTGSRAPTSARDGDMRRHGSGSASGIARRVQTAHSSAFAGD---EAEEAAFQEALRRSMLDTGPRGANGAGSTRGEQGRMGHG---------GDTPITNVESYRVTPSAPSEEVEWSVESEGGTGIGTAELRRRRLQRM 421
            + PGL    RGGM+++G         + R PW ++L L+LV +I  L  KPPLTLALMAGM+ALHL P++  +  G         G    S   W++ G+ +HI+ +CLLPAS+L+ Y+RTG +  RR  +S F+HG + HLYYNM SFLLKGVSLEL MGT+A+ GLL+F L+ SQ L ++++W++LVVF+ PS M+AC VGFSGV+FALKYVL+RRSP  T VMGF +HTRYA WLELVLI  MVPNASFLGHLCGI AG+LYVEVP V   +NL   +S++ N R  SYTY+SG++G  +P  AR                R+      +A+  D   EAEEAA QEALRRS+LD+  RG     + R + G              GD  +   E     P+AP  E        GG  I   ELRRRRL+R+
Sbjct:    4 LGPGLGRLPRGGMRDYGGXXXXXXXXQRRRPWALILALRLVHQISQLQHKPPLTLALMAGMSALHLKPDIFKDLFGRK-------GVFEWS---WLTGGF-DHIRNVCLLPASILDTYERTGEVEIRRLLMSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLLASQTLMMLSAWVLLVVFDVPSPMHACAVGFSGVLFALKYVLSRRSPGVTSVMGFSVHTRYATWLELVLISVMVPNASFLGHLCGILAGVLYVEVPIVLRVVNLFTGISLYNNRRGRSYTYNSGTSGRASPEGARR-------------ETRQQSPNPPAAYDIDSDPEAEEAALQEALRRSLLDS-TRGGGAGDNLRRDNGNSAADNPGSRSRPIGDDAVAATEFLGPAPTAPPPEENAGGYGAGGGEIAPDELRRRRLRRL 414          
BLAST of mRNA_H-elongata_contig879.16319.1 vs. uniprot
Match: A0A024TVC7_9STRA (Rhomboid domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TVC7_9STRA)

HSP 1 Score: 162 bits (411), Expect = 1.800e-43
Identity = 108/306 (35.29%), Postives = 153/306 (50.00%), Query Frame = 0
Query:   15 GGMQNFGSGRGRHRNPWFIVLGLQLVQKIVDLPRKPPLTLALMAGMTALHLAPEVVNNFLGTGPAVGGLGGFLAESYRRWVSNGYSNH-----IQELCLLPASMLEAYQRTGALGFRRFFLSAFLHGSERHLYYNMWSFLLKGVSLELDMGTRAYFGLLAFCLVTSQALFLVASWIMLVVFEQPSAMYACTVGFSGVIFALKYVLNRRSPAYTRVMGFKIHTRYAAWLELVLIQFMVPNASFLGHLCGIFAGILYV----EVPAVASALNLVAVSVFGNPRPSYTYSSGSTGSRAPTSARDGDMRR 311
            G M     GRG   N   ++L +QL+ +I  L RKPP+TL LM GM  L L                                 Y  H      ++  L P  ++E Y  +      R  +SAFLH  E HLY NM SFL KGV LE  +G+  +  ++   LV S  L +V ++I+       S ++ C +GFS V+FALK VLN+RSP Y+ ++G    T+YAAW+ELV + + VP +SF+GH+ GI AG LY+     VP  A+ +        G  RP+YTY+SG   +  P++  D +  R
Sbjct:    8 GNMPRHPGGRGLRNNGVLLMLAMQLLGQIQQLERKPPVTLLLMGGMVGLFL---------------------------------YQGHPGIPTARKYALCPDIIVEKYALS------RLIVSAFLHVDEWHLYNNMASFLWKGVQLEFHVGSERFARMIGVLLVMSHVLAVVVAYILSTFMGNSSYIHQCAIGFSAVLFALKVVLNQRSPTYSTILGISFPTKYAAWVELVYLHYFVPGSSFVGHIAGIAAGYLYLYGLSAVPTRATTIP------GGTRRPAYTYASGRATNSTPSTESDEEYAR 268          
BLAST of mRNA_H-elongata_contig879.16319.1 vs. uniprot
Match: A0A813AIL7_9DINO (RBL14 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813AIL7_9DINO)

HSP 1 Score: 157 bits (398), Expect = 1.940e-42
Identity = 96/230 (41.74%), Postives = 125/230 (54.35%), Query Frame = 0
Query:   38 QLVQKIVDLPRKPPLTLALMAGMTALHLAPEVVNNFLGTGPAVGGLGGFLAESYRRWVSNGYSNHIQELCLLPASMLEAYQRTGALGFRRFFLSAFLHGSERHLYYNMWSFLLKGVSLELDMGTRAYFGLLAFCLVTSQALFLVASWIMLVVFEQPSAMYACTVGFSGVIFALKYVLNRRSPAYTRVMGFKIHTRYAAWLELVLIQFMVPNASFLGHLCGIFAGILYVEV 267
            QL  +I +LP KPPLTLALM     +H +P                           +S G    +Q  CL PA+M+   Q    L       S FLHG + HLYYNM S L KGV +E  MG  ++  ++AF  V SQAL++   W+ L          +C VGFSGV+F LK +LN  SP  T V G+++ T+YAAW EL+LIQ + P+ASF GHLCGI AG+LY+ V
Sbjct:    5 QLAAQINNLPVKPPLTLALMGLQVLIHYSP---------------------------MSLGVVVDLQRQCLNPAAMVLKRQWFRGLA------SPFLHGDDWHLYYNMASLLWKGVQIEPHMGPLSFGIMVAFLTVVSQALYIAVGWLALTGAGYGGIWSSCAVGFSGVLFGLKAILNAHSPTETVVWGWRLPTKYAAWAELLLIQLVTPHASFTGHLCGILAGLLYLVV 201          
BLAST of mRNA_H-elongata_contig879.16319.1 vs. uniprot
Match: A0A2R6WSK1_MARPO (RanBP2-type domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WSK1_MARPO)

HSP 1 Score: 159 bits (402), Expect = 1.930e-41
Identity = 99/249 (39.76%), Postives = 131/249 (52.61%), Query Frame = 0
Query:   24 RGRHR-----NPWFIVLGLQLVQKIVDLPRKPPLTLALMAGMTALHLAPEVVNNFLGTGPAVGGLGGFLAESYRRWVSNGYSNHIQELCLLPASMLEAYQRTGALGFRRFFLSAFLHGSERHLYYNMWSFLLKGVSLELDMGTRAYFGLLAFCLVTSQALFLVASWIMLVVFEQPSAMYA-CTVGFSGVIFALKYVLNRRSPAYTRVMGFKIHTRYAAWLELVLIQFMVPNASFLGHLCGIFAGILYVE 266
            RGR+R     N    +L L    + + LPRKPP+T  L+   T +HL P V++  L T                          +QE+CL P  +L+ +        RR  LSAF H  + HL YNM S L KGV LE  MG++ + G++   L  S  L +V++  +    + P  MY+ C VGFS V+FALK VLN  SP YT V G  I +RYAAW EL  IQ  VP  SFLGHLCG+ AG++Y+ 
Sbjct:    3 RGRNRRVGGGNGMLYMLALHAASQFMQLPRKPPVTATLILANTIVHLRPGVLDLVLPT--------------------------VQEVCLNPYRVLKDWDA------RRLLLSAFYHVDDAHLVYNMISLLWKGVQLEGSMGSKKFAGMVGVLLGLSHGLVVVSAKFLYSFADNPGPMYSECAVGFSAVLFALKMVLNWNSPDYTNVYGVLIPSRYAAWAELFFIQMFVPGTSFLGHLCGVVAGLIYIN 219          
BLAST of mRNA_H-elongata_contig879.16319.1 vs. uniprot
Match: A0A225X2V2_9STRA (Serine protease n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X2V2_9STRA)

HSP 1 Score: 158 bits (400), Expect = 2.560e-41
Identity = 102/281 (36.30%), Postives = 150/281 (53.38%), Query Frame = 0
Query:    5 FGPRMAPGLRGGMQNFGSGRGRHRNPWFIVLGLQLVQKIVDLPRKPPLTLALMAGMTALHL----APEVVNNFLGTGPAVGGLGGFLAESYRRWVSNGYSNHIQELCLLPASMLEAYQRTGALGFRRFFLSAFLHGSERHLYYNMWSFLLKGVSLELDMGTRAYFGLLAFCLVTSQALFLVASWIMLVVFEQPSAMYACTVGFSGVIFALKYVLNRRSPAYTRVMGFKIHTRYAAWLELVLIQFMVPNASFLGHLCGIFAGILYVEVPAVASALNLVAVSV 281
            FGP +    R G  N G      R+   + L L LV++I  L RKPP+TL LMA M  +H      PE+   +                                LC  P  +L  +  T      R   SA +HG + HLY+NM SFL KG +LE  +G+  +   + + L+    L +V + ++   F+ P  ++ C+VGFSGV+FALK +LN  SPAY+ V GF++ T+YAAWLELV+I F+VP +SF+GH+CGI AG ++V  PA+ +A++  A ++
Sbjct:    2 FGPNVG---RRGRANVG------RDGQGVALMLMLVRQIQQLERKPPVTLGLMALMYGIHFQKTQTPELFAPY-------------------------------SLC--PDRVLSHWDWT------RIVASALIHGDDWHLYHNMVSFLWKGYNLEYKLGSVRFLLTVGYLLLLCHVLVVVVALVLATRFQMPGPLHQCSVGFSGVLFALKVLLNHNSPAYSSVYGFQVPTKYAAWLELVVIHFLVPRSSFMGHMCGILAGYIFVFSPAMQTAMSTGAHTI 234          
BLAST of mRNA_H-elongata_contig879.16319.1 vs. uniprot
Match: A0A482UPC4_9ARCH (Rhomboid family intramembrane serine protease (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UPC4_9ARCH)

HSP 1 Score: 155 bits (392), Expect = 3.410e-41
Identity = 88/250 (35.20%), Postives = 141/250 (56.40%), Query Frame = 0
Query:   24 RGRHRNPWFIVLGLQLVQKIVDLPRKPPLTLALMAGMTALHLAPEVVNNFLGTGPAVGGLGGFLAESYRRWVSNGYSNHIQELCLLPASMLEAYQRTGALGFRRFFLSAFLHGSERHLYYNMWSFLLKGVSLELDMGTRAYFGLLAFCLVTSQALFLVASWIMLVVFEQP--SAMYACTVGFSGVIFALKYVLNRRSPAYTRVMGFKIHTRYAAWLELVLIQFMVPNASFLGHLCGIFAGILYVEVPAVA 271
            R  H +P  + L +Q++ ++  LP KPP+TL L+A     H+ P+                 FL  S           ++++ C+ P+ ++ +     ++ + R  L+ F+H  + HLYYNM S L KGV LE   G+  +  L+ + L+ S  L +V S+++  V +    S+  +C +GFS V+F+LKYVLN+ SPAYT ++GF++ +++AAW ELVL   + P  SF+GHL GI AG LYV + +VA
Sbjct:   10 RSPHVSPVVVSLLIQILSQLEKLPYKPPVTLGLLAMNIIAHIHPDPY---------------FLDYSL---------TNVRQNCIWPSLIVSSLTNNHSILWNRIVLAGFMHADDMHLYYNMLSLLWKGVQLEQQFGSFQFGILVVYSLLASHILLVVMSYVVYAVTQNIHISSYDSCAIGFSAVLFSLKYVLNQNSPAYTSILGFQVPSKWAAWAELVLASLLSPQVSFIGHLAGILAGYLYVHMDSVA 235          
BLAST of mRNA_H-elongata_contig879.16319.1 vs. uniprot
Match: A0A6A4D013_9STRA (Rhomboid domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A4D013_9STRA)

HSP 1 Score: 157 bits (398), Expect = 4.650e-41
Identity = 96/253 (37.94%), Postives = 140/253 (55.34%), Query Frame = 0
Query:   33 IVLGLQLVQKIVDLPRKPPLTLALMAGMTALHL----APEVVNNFLGTGPAVGGLGGFLAESYRRWVSNGYSNHIQELCLLPASMLEAYQRTGALGFRRFFLSAFLHGSERHLYYNMWSFLLKGVSLELDMGTRAYFGLLAFCLVTSQALFLVASWIMLVVFEQPSAMYACTVGFSGVIFALKYVLNRRSPAYTRVMGFKIHTRYAAWLELVLIQFMVPNASFLGHLCGIFAGILYVEVPAVASALNLVAVSV 281
            + L L LV++I  L RKPP+TL LMA M  LH      PE+   F                                LC  P  +L  +       ++R   S  +H  + HLY+NM SFL KG +LE  +G+  +   + + LV    L ++ + I+   F+ P+ ++ C+VGFSGV+FALK +LN  SPA++ V GF++ T+YAAWLELV+I F+VP +SF+GH+CGI AG ++V  PA+ SA+  VA +V
Sbjct:   24 LALMLMLVRQIQQLERKPPVTLGLMALMYGLHFQKNQTPELFAPF-------------------------------SLC--PDRVLSNWD------WKRLVASGLIHVDDWHLYHNMISFLWKGCNLEYKLGSVRFLLTVGYLLVLCHVLVVMVALILATGFQMPAPLHQCSVGFSGVLFALKVLLNHNSPAFSSVYGFQVPTKYAAWLELVVIHFLVPRSSFMGHMCGILAGYIFVYSPAMQSAMTSVARAV 237          
BLAST of mRNA_H-elongata_contig879.16319.1 vs. uniprot
Match: A0A836CHG7_9STRA (Rhomboid domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHG7_9STRA)

HSP 1 Score: 157 bits (398), Expect = 7.330e-41
Identity = 132/354 (37.29%), Postives = 183/354 (51.69%), Query Frame = 0
Query:   22 SGRGRHRNPWFIVLGLQLVQKIVDLPRKPPLTLALMAGMTALHLAPEVVNNFLGTGPAVGGLGGFLAESYRRWVSNGYSNHIQELCLLPASMLEAYQRTGALGFRRFFLSAFLHGSERHLYYNMWSFLLKGVSLELDMGTRAYFGLLAFCLVTSQALFLVASWIMLVVFEQPSAMYACTVGFSGVIFALKYVLNRRSPAYTRVMG-FKIHTRYAAWLELVLIQFMVPNASFLGHLCGIFAGILYVEVPAVAS--ALNLVAVSV----------FGNPRPSYTYSSGSTGSRAPTSARDGDMRRHGSGS-ASGIARRVQTAHSSAFAGDEAEEAAFQEALRRSMLDTGPRGANGA 361
            SGR R  NP+   + L L+ + + LP KPP T  L+A    +HL P  +   L   PA             R +   Y+    ++CL PA +++     G +   R F SA +HG + HL+YNM S L+KGVSLE  MGT A+  L+ F    S  L +V +   + +   P    +C VGFS V+FALKYV   R PA    +G F I +R+A+W EL+LIQ +VPNASFLGHLCGI AG+L+V   AV +  A  L  + V          +G     YTY+ G++G+ A               + A G A     + S+AF  ++A+ A  QEALRRS+ +    GA GA
Sbjct:    5 SGRQRTGNPYATGVALDLLNRFLQLPYKPPFTCFLIALNACIHLYPAALAGVL---PA-------------RLLFGDYT----KVCLKPAKVVKELLN-GEVDAVRLFGSALIHGDDLHLWYNMGSLLMKGVSLETTMGTPAFALLVVFLWALSHTLVVVVALASVYLGFDPG-FNSCMVGFSAVLFALKYVAAFREPARPTPVGYFLIDSRWASWAELILIQVVVPNASFLGHLCGILAGVLWVHGGAVVAYTAKTLAPLGVGRGGPGAYDTYGGRGSRYTYARGTSGTAAAXXXXXXXXXXXRPPAFAPGAA-----SDSAAFEVEDAD-AQLQEALRRSLEEVRLGGAAGA 330          
BLAST of mRNA_H-elongata_contig879.16319.1 vs. uniprot
Match: A0A2K1JBZ4_PHYPA (RanBP2-type domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JBZ4_PHYPA)

HSP 1 Score: 156 bits (394), Expect = 2.720e-40
Identity = 91/245 (37.14%), Postives = 132/245 (53.88%), Query Frame = 0
Query:   29 NPWFIVLGLQLVQKIVDLPRKPPLTLALMAGMTALHLAPEVVNNFLGTGPAVGGLGGFLAESYRRWVSNGYSNHIQELCLLPASMLEAYQRTGALGFRRFFLSAFLHGSERHLYYNMWSFLLKGVSLELDMGTRAYFGLLAFCLVTSQALFLVASWIMLVVFEQPSAMYA-CTVGFSGVIFALKYVLNRRSPAYTRVMGFKIHTRYAAWLELVLIQFMVPNASFLGHLCGIFAGILYVEVPAVAS 272
            N    ++ +     ++  PRKP +T AL+A  T +HL P  ++  L T                          + E+CL P  +++          +R +LSA  H  E HL YNM S   KG+ LE  MG++ Y  ++A  L  S +L + +S  +  + + P++ Y+ C+VGFSGV+FALK VLN  SP +T V G  + +RYAAW+EL++IQ  VP  SFLGHLCGI AG++YV  P V S
Sbjct:   11 NSMLYMMAMHAATNLLQQPRKPVVTAALIAAQTLIHLRPGKLDAILPT--------------------------LSEVCLNPYFVVKNRD------LKRLWLSALYHVDETHLVYNMISLTWKGIQLENSMGSQNYAAMVAVLLGLSSSLVVASSSFLAFIADSPTSFYSECSVGFSGVLFALKVVLNYNSPTHTNVYGILVPSRYAAWVELLVIQMFVPGTSFLGHLCGILAGLIYVNTPGVVS 223          
BLAST of mRNA_H-elongata_contig879.16319.1 vs. uniprot
Match: A0A7S2TY11_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TY11_9EUKA)

HSP 1 Score: 153 bits (387), Expect = 6.920e-40
Identity = 96/244 (39.34%), Postives = 131/244 (53.69%), Query Frame = 0
Query:   25 GRHR---NPWFIVLGLQLVQKIVDLPRKPPLTLALMAGMTALHLAPEVVNNFLGTGPAVGGLGGFLAESYRRWVSNGYSNHIQELCLLPASMLEAYQRTGALGFRRFFLSAFLHGSERHLYYNMWSFLLKGVSLELDMGTRAYFGLLAFCLVTSQALFLVASWIMLVVFEQPSAMYACTVGFSGVIFALKYVLNRRSPAYTRVMGFKIHTRYAAWLELVLIQFMVPNASFLGHLCGIFAGILYV 265
            GR R   +P  ++L +QL ++I +L  KPP TLALMA  +A++L                      +  +R          + ++C+ PA +L          ++R  LSAF H  + HLYYNM S L KGV LE   GT  + G+    L  S + ++ A+WIM  +    S+M  C VGFS V+FA K VLN  SP  T V G  +  +YA WLELV+I  + PNASFLGHLCGI AG++YV
Sbjct:    7 GRRRGQIDPRMMMLLMQLGRQIANLEYKPPATLALMALNSAVYLYE-------------------FSLPFR----------VPDVCMHPAKILFGGD------WKRLVLSAFYHADDYHLYYNMSSLLWKGVQLEQQFGTEEFIGMTLVLLGLSHSFYVAAAWIMYTLGISSSSMQTCAVGFSAVLFAYKVVLNFNSPRMTNVYGISVPLKYACWLELVMISIITPNASFLGHLCGILAGLVYV 215          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig879.16319.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJN1_ECTSI7.870e-11247.94Rhomboid domain-containing protein n=2 Tax=Ectocar... [more]
A0A024TVC7_9STRA1.800e-4335.29Rhomboid domain-containing protein n=1 Tax=Aphanom... [more]
A0A813AIL7_9DINO1.940e-4241.74RBL14 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A2R6WSK1_MARPO1.930e-4139.76RanBP2-type domain-containing protein n=2 Tax=Marc... [more]
A0A225X2V2_9STRA2.560e-4136.30Serine protease n=1 Tax=Phytophthora megakarya Tax... [more]
A0A482UPC4_9ARCH3.410e-4135.20Rhomboid family intramembrane serine protease (Fra... [more]
A0A6A4D013_9STRA4.650e-4137.94Rhomboid domain-containing protein n=3 Tax=Phytoph... [more]
A0A836CHG7_9STRA7.330e-4137.29Rhomboid domain-containing protein n=1 Tax=Tribone... [more]
A0A2K1JBZ4_PHYPA2.720e-4037.14RanBP2-type domain-containing protein n=2 Tax=Phys... [more]
A0A7S2TY11_9EUKA6.920e-4039.34Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035952Rhomboid-like superfamilyGENE3D1.20.1540.10coord: 93..276
e-value: 3.3E-12
score: 48.2
IPR022764Peptidase S54, rhomboid domainPFAMPF01694Rhomboidcoord: 126..265
e-value: 1.2E-17
score: 64.3
NoneNo IPR availablePANTHERPTHR43066:SF1RHOMBOID-RELATED PROTEIN 4coord: 32..327
NoneNo IPR availablePANTHERPTHR43066RHOMBOID-RELATED PROTEINcoord: 32..327
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 164..189
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 283..425
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 215..234
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 235..252
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 190..194
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..163
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 195..214
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 253..257
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 258..282
NoneNo IPR availableSUPERFAMILY144091Rhomboid-likecoord: 48..265
NoneNo IPR availableTMHMMTMhelixcoord: 262..284
NoneNo IPR availableTMHMMTMhelixcoord: 193..215
NoneNo IPR availableTMHMMTMhelixcoord: 166..188
NoneNo IPR availableTMHMMTMhelixcoord: 236..258

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig879contigH-elongata_contig879:10816..13990 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig879.16319.1mRNA_H-elongata_contig879.16319.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig879 10383..14311 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig879.16319.1 ID=prot_H-elongata_contig879.16319.1|Name=mRNA_H-elongata_contig879.16319.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=426bp
MFPHFGPRMAPGLRGGMQNFGSGRGRHRNPWFIVLGLQLVQKIVDLPRKP
PLTLALMAGMTALHLAPEVVNNFLGTGPAVGGLGGFLAESYRRWVSNGYS
NHIQELCLLPASMLEAYQRTGALGFRRFFLSAFLHGSERHLYYNMWSFLL
KGVSLELDMGTRAYFGLLAFCLVTSQALFLVASWIMLVVFEQPSAMYACT
VGFSGVIFALKYVLNRRSPAYTRVMGFKIHTRYAAWLELVLIQFMVPNAS
FLGHLCGIFAGILYVEVPAVASALNLVAVSVFGNPRPSYTYSSGSTGSRA
PTSARDGDMRRHGSGSASGIARRVQTAHSSAFAGDEAEEAAFQEALRRSM
LDTGPRGANGAGSTRGEQGRMGHGGDTPITNVESYRVTPSAPSEEVEWSV
ESEGGTGIGTAELRRRRLQRMSIDL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035952Rhomboid-like_sf
IPR022764Peptidase_S54_rhomboid_dom