prot_H-elongata_contig87712.16302.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig87712.16302.1
Unique Nameprot_H-elongata_contig87712.16302.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length205
Homology
BLAST of mRNA_H-elongata_contig87712.16302.1 vs. uniprot
Match: D8LSC2_ECTSI (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC2_ECTSI)

HSP 1 Score: 327 bits (838), Expect = 1.350e-109
Identity = 169/198 (85.35%), Postives = 182/198 (91.92%), Query Frame = 0
Query:    8 KVHTTSLVPAGDPESDVQPVLNGIIEPLLKACRLSCDGLDPSDGAVFMLNNIDVVREALLAYGHTEAWTRNLTADMDEWLGVLVRHQADKVLERCGLAQAVRAAVAAEEEMQKGVASERPGLQESSLSAVLRSFYSSLFTLVMPDFERLRRPGTRADARRSTALLVAEAHEIVHRLVSREDSGYADRSFLLHTPEQVR 205
            +VH+TSLVPAG+PESDVQPVL+GI+EPLLKACRLS DGLDPSDGAVFMLNNID +REAL+A+ HTEAWT  LT +MD+WLGVLVRHQADKVLERCG+AQAVRAA AAE   Q G  +E PGLQE SLSAVLRSFYSSLFTLVMPDFERLRRPGTRADARRSTA+LVAEAHE VHRLVSREDSGYADRSFLLHTPEQVR
Sbjct:  165 QVHSTSLVPAGEPESDVQPVLSGIVEPLLKACRLSADGLDPSDGAVFMLNNIDAIREALVAHAHTEAWTLELTTEMDKWLGVLVRHQADKVLERCGVAQAVRAAAAAEG--QTGPMNEVPGLQERSLSAVLRSFYSSLFTLVMPDFERLRRPGTRADARRSTAMLVAEAHETVHRLVSREDSGYADRSFLLHTPEQVR 360          
BLAST of mRNA_H-elongata_contig87712.16302.1 vs. uniprot
Match: A0A7S2S2C7_9STRA (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2C7_9STRA)

HSP 1 Score: 139 bits (350), Expect = 1.340e-34
Identity = 80/194 (41.24%), Postives = 113/194 (58.25%), Query Frame = 0
Query:   15 VPAGDPESDVQPVLNGIIEPLLKACRLSCDG-LDPSDGAVFMLNNIDVVREALLAYGHTEAWTRNLTADMDEWLGVLVRHQADKVLERCGLAQAVRAAVAAEEEMQK--GVASERPGLQESSLSAVLRSFYSSLFTLVMPDFERLRRPGTRADARRSTALLVAEAHEIVHRLVSREDSGYADRSFLLHTPEQVR 205
            VP  + E  ++ +L  I+EPLL  CR S +G LD  D A  M+N    +  A+ ++     W+R+LTA+M  WLGVLV H+A+++L  CGL   ++       E+ K  G ASE+PGL  +S+   +  FYS++F L +P FERL     R  AR+  A  +A AH+ V+ LV    + Y D SFL HTPEQVR
Sbjct:  535 VPVKEDECGIEAILATILEPLLTTCRQSAEGRLDAGDTATLMINAAHTMHGAVESFQTAADWSRDLTAEMQTWLGVLVSHEAERLLGECGLTSLLQTM-----EVMKVHGTASEQPGLDAASVERAMLDFYSTIFALAVPSFERLAPLEVREAARKGVAERIANAHQSVYNLVKDPANKYGDSSFLQHTPEQVR 723          
BLAST of mRNA_H-elongata_contig87712.16302.1 vs. uniprot
Match: A0A7S2SLV6_9STRA (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SLV6_9STRA)

HSP 1 Score: 131 bits (329), Expect = 7.340e-32
Identity = 74/191 (38.74%), Postives = 111/191 (58.12%), Query Frame = 0
Query:   19 DPESDVQPVLNGIIEPLLKACRLSCDGLDPSDGAVFMLNNIDVVREALLAYGHTEAWTRNLTADMDEWLGVLVRHQADKVLERCGLAQAVRAAVAAEEEMQKGVASERPGLQESSLSAVLRSFYSSLFTLVMPDFERLRRPGTRADARRSTALLVAEAHEIVHRLV-SREDSGYADRSF---LLHTPEQVR 205
            D E    P+L+  I+PLL  CR S  GLD SD AV+++NN+  ++ +L  Y  T +W + LT ++ +W+ VLV+ Q+D +L    +A+ +     A+          +PG+   SL + L SFY SLF+LVMP+F+RL  P  RA AR +TA  +A ++E  +  V  +E SG  + S    LLH P+QVR
Sbjct:  449 DREERFAPILDAFIDPLLAMCRQSASGLDRSDAAVYIVNNMVAIQSSLTRYDFTVSWVQRLTTEIGDWVDVLVKEQSDNILRHSAMAEKIECIERADPSTPLV---SQPGMDIESLRSALDSFYKSLFSLVMPEFDRLTSPRLRASARNATAQTIANSYEAFYNAVMDKERSGIDEASLKGILLHNPQQVR 636          
BLAST of mRNA_H-elongata_contig87712.16302.1 vs. uniprot
Match: A0A2R5GVE9_9STRA (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GVE9_9STRA)

HSP 1 Score: 131 bits (329), Expect = 8.620e-32
Identity = 77/193 (39.90%), Postives = 112/193 (58.03%), Query Frame = 0
Query:   17 AGDPESDVQPVLNGIIEPLLKACRLSCDGLDPSDGAVFMLNNIDVVREALLAYGHTEAWTRNLTADMDEWLGVLVRHQADKVLERCGLAQAVRAAVAAEEEMQKGVASERPGLQESSLSAVLRSFYSSLFTLVMPDFERLRRPGTRADARRSTALLVAEAHEIVHR-LVSREDSGYADR---SFLLHTPEQVR 205
            A + E    PVLN  I PL++ACR S  GLD +D AV+++NN+  ++ +L  Y  T +W + LTA++ +W  +LVR QAD +L R G+A  +     A+         ++PG+   +L  VL SFY S+F+LVMP+F+RL  P  RA AR +TA  +A  +E  +  L     SGY      + LLH P+QVR
Sbjct:  493 AEERERRFAPVLNAFIGPLMQACRQSASGLDRADAAVYIINNLVAMQSSLTRYDFTVSWVQRLTAEIGDWTDLLVREQADAILRRSGMADKMELIARADPSQPLA---QQPGMTLDALREVLDSFYKSMFSLVMPEFDRLSSPRLRASARNATAGAIAATYEQFYATLQDLSRSGYQPAQLSNILLHDPQQVR 682          
BLAST of mRNA_H-elongata_contig87712.16302.1 vs. uniprot
Match: A0A7S3LLI7_9STRA (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LLI7_9STRA)

HSP 1 Score: 118 bits (296), Expect = 5.100e-28
Identity = 61/187 (32.62%), Postives = 107/187 (57.22%), Query Frame = 0
Query:   21 ESDVQPVLNGIIEPLLKACRLSCDGLDPSDGAVFMLNNIDVVREALLAYGHTEAWTRNLTADMDEWLGVLVRHQADKVLERCGLAQAVRAAVAAEEEMQKGVASERPGLQESSLSAVLRSFYSSLFTLVMPDFERLRRPGTRADARRSTALLVAEAHEIVHRLVSREDSGYADRSF---LLHTPEQV 204
            E++  PVLN  IEPLL   + S  GLD +D  ++++NNI  +++ +  Y  T ++   LT ++ +W+  +V  Q++++ +RCG+ + ++        + +   S + G+  +SL A    FY S+F++VMP+F+RL  P  R  AR STA  +A  +  ++  +S  +SGY+       L+H PEQV
Sbjct:  233 EAEFTPVLNAFIEPLLVTFKASASGLDRTDAGIYIINNIFAIQDIMTQYDFTASFVERLTMEIGDWMDHIVTEQSNEIWKRCGMHEKMKL-------LDEVDISSQQGMDPASLQAAFSKFYQSMFSMVMPEFDRLNNPRLRTTARNSTARSIAMGYVRLYNALSNPESGYSKEELERILVHAPEQV 412          
BLAST of mRNA_H-elongata_contig87712.16302.1 vs. uniprot
Match: A0A7R9UAD7_9STRA (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAD7_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 2.580e-15
Identity = 54/160 (33.75%), Postives = 85/160 (53.12%), Query Frame = 0
Query:   46 LDPSDGAVFMLNNIDVVREALLAYGHTEAWTRNLTADMDEWLGVLVRHQADKVLERCGLAQAVRAAVAAEEEMQKGVASERPGLQESSLSAVLRSFYSSLFTLVMPDFERLRRPGTRADARRSTALLVAEAHEIVHRLVSREDSGYADRSFLLHTPEQVR 205
            ++P++  V + ++  +V+E  L     + W + L     +   V+V   + +VLE+ GLA  + A  AA         SE P L   ++  V+ +F  +LFT+ +PDFER+  P  +  AR  T   VA+ +  +  +V  E  GYADRSFL+H PEQVR
Sbjct:  251 VEPAESQVLLPDDPSLVQEKSLQ--SLQHWLKTLDQGAAQLRQVVVDVHSRRVLEKTGLAALLEARAAALASEDDAPLSEYPTLGLEAVRVVIDAFNGALFTIFVPDFERITDPDEKNTARVDTMTKVADGYATIWEMVMDEKQGYADRSFLVHAPEQVR 408          
BLAST of mRNA_H-elongata_contig87712.16302.1 vs. uniprot
Match: A0A836CBI3_9STRA (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBI3_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 1.720e-14
Identity = 64/210 (30.48%), Postives = 99/210 (47.14%), Query Frame = 0
Query:    5 SKQKVHTTSLVPAGD-PESDVQPVLNGIIEPLLKACRLSCDGLDPSDGAVFMLNNIDVVREALLAYGHTEAWTRNLTADMDEWLGVLVRHQADKVLERCGLAQAVRAAVAAEEEMQKGVA-------SERPGLQESSLSAVLRSFYSSLFTLVMPDFERLRRPGTRADARRSTALLVAEAHEIVHRLVSREDSGYADR-SFLLHTPEQVR 205
            +++ V   + +PA   PE  + P L   +EP L AC     G+D SD           V E                           R    +VLERCGL + +RAA                   +E+PGL+  ++++ + +FYS+LF+L MP+ ER+R P  +  AR+ ++  +A+AH  +H ++S   +GY D  SFL HTP+QVR
Sbjct:  492 AQELVRAAATLPAATAPECALAPPLAAALEPPLDACARIARGMDASDA----------VSEPR-------------------------RRACAQVLERCGLGRVLRAAATXXXXXXXXXXXXXAAPLAEQPGLEAHTVASAMAAFYSALFSLTMPELERVRAPLVKGRARQLSSRQIADAHAHLHGVLSAPAAGYRDAASFLSHTPDQVR 666          
BLAST of mRNA_H-elongata_contig87712.16302.1 vs. uniprot
Match: A0A6A6MQJ0_HEVBR (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6MQJ0_HEVBR)

HSP 1 Score: 70.5 bits (171), Expect = 3.990e-11
Identity = 47/200 (23.50%), Postives = 103/200 (51.50%), Query Frame = 0
Query:   10 HTTSLVPAGDPESDVQPVLNGIIEPLLKACRLSCDGLDPSDGAVFMLNNIDVVREALLAYGHTEAWTRNLTADMDEWLGVLVRHQADKVLERCGLAQAVRAAVAAEEEMQKGVA-SERPGLQESSLSAVLRSFYSSLF--TLVMPDFERLRRPGTRADARRSTALLVAEAHEIVHRLVSREDSGYAD-RSFLLHTPEQVR 205
            H + +VPA   + D  PV++ I++P+++           +   +F++N +  +++ L  +     + + L A ++  +  LV  + D +L RC L+  +         +  G+  +E      +SLS  LR+F+  +      +P+FE+++ P  R++A    A  +AEA+E++++++    +GY++ +S   H P+Q+R
Sbjct:   68 HDSMMVPASVKKPDFDPVMSAILDPIIQNSE--------TPSKIFLINCLCAIQQPLSGHEVAAEYVKKLGAMIENHMHALVAKEVDAILRRCSLSHKMSHF---HNSLGNGITLAEIEETSPASLSESLRAFFGLILGSESSLPEFEQIQVPKLRSEASIQVARSLAEAYELIYKVIMDPKNGYSEPKSLARHPPDQIR 256          
BLAST of mRNA_H-elongata_contig87712.16302.1 vs. uniprot
Match: A0A8J2EY33_9DINO (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J2EY33_9DINO)

HSP 1 Score: 63.2 bits (152), Expect = 3.750e-8
Identity = 58/198 (29.29%), Postives = 89/198 (44.95%), Query Frame = 0
Query:   19 DPESDVQPVLNGIIEPLLKACRLSCDGLDPSDGAVFMLNNIDVVREALLAYGHTEAWTRNLTADMDEWLGVLVRHQADKVLERCGLAQ---AVRAAVAAEEEMQKG------VASERPGLQESSLSAVLRSFYSSLFTLV---MPDFERLRRPGTRADARRSTALLVAEAHEIVHRLVSREDSGYADRSFLLHTPEQV 204
            D   + QP+L    +PLL  CR      +P D AVF++N I ++ E L      +      +  + E    L+ HQ  + L++ GL +   A+R  V   E+   G         + P L   SLS+VLRSFY+SLFTL    +P  E++     R + R++    + EA+  +H        G        HT +QV
Sbjct:  422 DSLEEFQPILCAAYDPLLNHCRQMFSS-NPEDRAVFLINCISLMLEPLKTLPLAQDRAVLYSQLIQEQQMYLIEHQGQETLQKLGLLEKVTALRDVVGYPEKFPDGGFPTAAQLQQVPELHAVSLSSVLRSFYTSLFTLKALSVPHVEKISARELREETRKAVGRKILEAYIFLH-------DGLQALQVTTHTKDQV 611          
BLAST of mRNA_H-elongata_contig87712.16302.1 vs. uniprot
Match: A0A2C9UIG2_MANES (Conserved oligomeric Golgi complex subunit 6 n=4 Tax=Crotonoideae TaxID=235631 RepID=A0A2C9UIG2_MANES)

HSP 1 Score: 59.3 bits (142), Expect = 7.920e-7
Identity = 40/164 (24.39%), Postives = 83/164 (50.61%), Query Frame = 0
Query:   53 VFMLNNIDVVREALLAYGHTEAWTRNLTADMDEWLGVLVRHQADKVLERCGLAQAVRAAVAAEEEMQKGVASERPGL--------QESSLSAVLRSFYSSLF--TLVMPDFERLRRPGTRADARRSTALLVAEAHEIVHRLVSREDSGYAD-RSFLLHTPEQVR 205
            +F++N +  +++ L  Y     + + L A ++  +  LV  + D  L RC L+  +             +A+E  G+          +SLS  LR+F+  +      +P+FE+++ P  R++A    A  +AEA+E++++++    +GY++ +S   H P+Q+R
Sbjct:  529 IFLINCLCAIQQPLSGYEVAAEYVKKLGAMIENHMQALVAKEVDASLRRCNLSHKMS-------HFHNSLANEAVGIPLAEIEETSPASLSESLRAFFGLILGSESSLPEFEQIQVPKLRSEASIQVARSLAEAYELIYKVIMDPTNGYSEPKSLARHPPDQIR 685          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig87712.16302.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D8LSC2_ECTSI1.350e-10985.35Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
A0A7S2S2C7_9STRA1.340e-3441.24Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
A0A7S2SLV6_9STRA7.340e-3238.74Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
A0A2R5GVE9_9STRA8.620e-3239.90Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
A0A7S3LLI7_9STRA5.100e-2832.62Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
A0A7R9UAD7_9STRA2.580e-1533.75Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
A0A836CBI3_9STRA1.720e-1430.48Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
A0A6A6MQJ0_HEVBR3.990e-1123.50Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
A0A8J2EY33_9DINO3.750e-829.29Conserved oligomeric Golgi complex subunit 6 n=1 T... [more]
A0A2C9UIG2_MANES7.920e-724.39Conserved oligomeric Golgi complex subunit 6 n=4 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010490Conserved oligomeric Golgi complex subunit 6PFAMPF06419COG6coord: 9..205
e-value: 3.9E-27
score: 94.7
IPR010490Conserved oligomeric Golgi complex subunit 6PANTHERPTHR21506COMPONENT OF OLIGOMERIC GOLGI COMPLEX 6coord: 8..205

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig87712contigH-elongata_contig87712:285..2074 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig87712.16302.1mRNA_H-elongata_contig87712.16302.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig87712 285..2074 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig87712.16302.1 ID=prot_H-elongata_contig87712.16302.1|Name=mRNA_H-elongata_contig87712.16302.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=205bp
MPVPSKQKVHTTSLVPAGDPESDVQPVLNGIIEPLLKACRLSCDGLDPSD
GAVFMLNNIDVVREALLAYGHTEAWTRNLTADMDEWLGVLVRHQADKVLE
RCGLAQAVRAAVAAEEEMQKGVASERPGLQESSLSAVLRSFYSSLFTLVM
PDFERLRRPGTRADARRSTALLVAEAHEIVHRLVSREDSGYADRSFLLHT
PEQVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010490COG6