prot_H-elongata_contig8756.16289.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8756.16289.1
Unique Nameprot_H-elongata_contig8756.16289.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length220
Homology
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BLAST of mRNA_H-elongata_contig8756.16289.1 vs. uniprot
Match: D8LM21_ECTSI (Stn1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM21_ECTSI)

HSP 1 Score: 250 bits (638), Expect = 1.230e-78
Identity = 131/219 (59.82%), Postives = 155/219 (70.78%), Query Frame = 0 
Query:    1 MELAKNIYKPPFRRDEYVDDDLVVSSNQARPSRCDCGAAYAERVGYCRCIAAPLALDPEFEFRDALFTHLAAMEERLP-PGEYLYVQFARDVRDDPILRETAARVVSKVRSGECLGGGGRGGGWRMDKIFDAKVIELLRAVMSSLYRDGALHFSDRTEDVYVLVSRGRVLQPGVEAVCRGRGLRLTQENEIVRALQESALFHHVPGSRIRACVHRMKRS 218
            +EL K +Y+PPF+RD+Y+D++LV  S+QARP++C CGAAYAE VGYCRC+AAPLALDP FEFRDAL   LAA EE L  P E+L  QFARD                   +G       RG       +  AK +ELLRAVMSSL+RDGALHF DR  DVYVLVSRGRVL+P VE  CR R L L+QENEI+RALQ SAL HHVPG+RIRACV+RMK++
Sbjct:  186 VELGKTVYRPPFQRDDYIDEELVAGSSQARPTQCGCGAAYAEAVGYCRCVAAPLALDPTFEFRDALLARLAAKEESLAGPDEHLRFQFARD---------------RPAEAGAAAAAAPRG------VMQQAKALELLRAVMSSLHRDGALHFLDRARDVYVLVSRGRVLRPAVEEACRRRRLGLSQENEIIRALQGSALLHHVPGARIRACVYRMKKA 383
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BLAST of mRNA_H-elongata_contig8756.16289.1 vs. uniprot
Match: A0A7S3QJF5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJF5_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 7.530e-6
Identity = 45/151 (29.80%), Postives = 61/151 (40.40%), Query Frame = 0 
Query:   34 CDCGAAYAERVGYCRCIAAPLALDPEFEFRDALFTHLAAME-------------ERLPPGEYLYVQFARDVRDDPILRETAARVVSKVRSGECLGGGGRGGGWRMDKIFDAKVIELLRAVMSSLYRDGALHFSDRTEDVYVLVSRGRVLQP 171
            C C  +Y E + YC C+A+   LDPE  FRD L   L  +E             E+    +   +   R    D IL+  A  VVSK                  D   + +   L       L +DG L  +D  EDVY+L+S+ RVL P
Sbjct:  272 CTCNISYKESLLYCHCLASREQLDPELSFRDTLLKRLLDLEMSNHTDSSLNFIREKCGGQKNCLLFRFRIAFQDEILKAVAKGVVSKT----------------CDPTINLR--RLYTKTFRHLRKDGILFLADEHEDVYMLLSKERVLVP 404
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8756.16289.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LM21_ECTSI1.230e-7859.82Stn1 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A7S3QJF5_9STRA7.530e-629.80Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8756contigH-elongata_contig8756:7923..9042 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8756.16289.1mRNA_H-elongata_contig8756.16289.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8756 7030..9812 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8756.16289.1 ID=prot_H-elongata_contig8756.16289.1|Name=mRNA_H-elongata_contig8756.16289.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=220bp
MELAKNIYKPPFRRDEYVDDDLVVSSNQARPSRCDCGAAYAERVGYCRCI
AAPLALDPEFEFRDALFTHLAAMEERLPPGEYLYVQFARDVRDDPILRET
AARVVSKVRSGECLGGGGRGGGWRMDKIFDAKVIELLRAVMSSLYRDGAL
HFSDRTEDVYVLVSRGRVLQPGVEAVCRGRGLRLTQENEIVRALQESALF
HHVPGSRIRACVHRMKRSS*
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