prot_H-elongata_contig87132.16260.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig87132.16260.1
Unique Nameprot_H-elongata_contig87132.16260.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length298
Homology
BLAST of mRNA_H-elongata_contig87132.16260.1 vs. uniprot
Match: D8LS39_ECTSI (Utp12 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS39_ECTSI)

HSP 1 Score: 392 bits (1008), Expect = 9.000e-126
Identity = 224/299 (74.92%), Postives = 251/299 (83.95%), Query Frame = 0
Query:    1 QAWALEVSADGSFVLSGGHDRSLRIWRRTDEMVFLEEEREKELEGLFEAELDRDDVA--GAAGFAPPS---KPVGEVEGDEGVEAANGGA--QAESGPATKRSIESVKAGERLMDALELAAQEEKLMRADEKAAARAKQKGEPAPGVRRPNPVLLNLFPLRYILRTLQARGDSGSRYPSCSMIKTPELEQALLVLPFSQVENLAKFLVRLLAAGLEVELCARCAIFLLRVHQARIVSSGSMVAVLDALRGNLRRQLEASRDAVGCNMAGLRMLGRIVEQERTAYMMESEEDRLVKKMRQ 292
            +AW LEVS DGSFVLSGGHDRSLR+WRRT+EMVFLEEEREKE+EGLFE+ELDRDDVA  GA G A P+   KP G  EG +G   A+GG   QAESGPATKRS+ESVKAGERLMDALELA  E KLMR +E+AAA+A+++GEPAP  RRPNP+LLNL PLRY+LRTLQ             MIKTPELEQALLVLPFSQVE+LA FLVRLLAAGLEVELCARCA+FLLRVHQARIVS+GSMV VLDALR NLRRQLEASRD VG NMAGLR+LGR+ E+++ AY+MESEEDRL K+MRQ
Sbjct:  755 EAWTLEVSPDGSFVLSGGHDRSLRLWRRTEEMVFLEEEREKEMEGLFESELDRDDVAAPGADGLALPAPQRKPEGTEEGGDGDGGASGGGAQQAESGPATKRSLESVKAGERLMDALELAELELKLMREEERAAAKARRRGEPAPPARRPNPILLNLSPLRYVLRTLQ-------------MIKTPELEQALLVLPFSQVESLANFLVRLLAAGLEVELCARCAVFLLRVHQARIVSTGSMVVVLDALRNNLRRQLEASRDVVGRNMAGLRILGRLAEEDKNAYLMESEEDRLAKRMRQ 1040          
BLAST of mRNA_H-elongata_contig87132.16260.1 vs. uniprot
Match: A0A7S3XPK1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPK1_HETAK)

HSP 1 Score: 206 bits (524), Expect = 1.400e-61
Identity = 133/278 (47.84%), Postives = 169/278 (60.79%), Query Frame = 0
Query:    1 QAWALEVSADGSFVLSGGHDRSLRIWRRTDEMVFLEEEREKELEGLFEAELDRDDVAGAAGFAPPSKPVGEVEGDEGVEAANGGAQAESGPATKRSIESVKAGERLMDALELAAQEEKLMRADEKAAARAKQKGEPAPGVRRPNPVLLNLFPLRYILRTLQARGDSGSRYPSCSMIKTPELEQALLVLPFSQVENLAKFLVRLLAAGLEVELCARCAIFLLRVHQARIVSSGSMVAVLDALRGNLRRQLEASRDAVGCNMAGLRMLGRIVEQERTAYM 278
            + W+L VS DGSF++SG HDRSLR+W RTDE VFLEEEREKE+E +FE            G   P +     E  EG          ES  A+KR+IESV++GERLMDA+E+A  EE+ +   EK   +  +KG+P    R+PNP++L   PL YIL TLQ              I+  ELEQALLVL ++  E L  FL RLLA G EVEL AR AIFLLR HQA+I++  S+V  L ALR  LRR+LE  +D +G N+AGL  L R +E +   Y+
Sbjct:   33 EVWSLAVSNDGSFLISGSHDRSLRVWERTDEPVFLEEEREKEMEAMFEE-----------GLGQPDRDA--EENQEG----------ESALASKRTIESVRSGERLMDAIEIAVSEEEAIEEHEKKNKKLDKKGQPRLKDRQPNPLMLGKSPLAYILFTLQ-------------QIRPAELEQALLVLSYTFAEPLISFLQRLLARGAEVELAARAAIFLLRTHQAQIIAHHSLVGELTALRWALRRRLEGQKDLLGTNLAGLAYLRRKIEADSNTYL 274          
BLAST of mRNA_H-elongata_contig87132.16260.1 vs. uniprot
Match: A0A7S3XPJ0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPJ0_HETAK)

HSP 1 Score: 201 bits (511), Expect = 1.990e-59
Identity = 130/266 (48.87%), Postives = 164/266 (61.65%), Query Frame = 0
Query:    1 QAWALEVSADGSFVLSGGHDRSLRIWRRTDEMVFLEEEREKELEGLFEAELDRDDVAGAAGFAPPSKPVGEVEGDEGVEAANGGAQAESGPATKRSIESVKAGERLMDALELAAQEEKLMRADEKAAARAKQKGEPAPGVRRPNPVLLNLFPLRYILRTLQARGDSGSRYPSCSMIKTPELEQALLVLPFSQVENLAKFLVRLLAAGLEVELCARCAIFLLRVHQARIVSSGSMVAVLDALRGNLRRQLEASRDAVGCNMAGLRML 266
            + W+L VS DGSF++SG HDRSLR+W RTDE VFLEEEREKE+E +FE            G   P +     E  EG          ES  A+KR+IESV++GERLMDA+E+A  EE+ +   EK   +  +KG+P    R+PNP++L   PL YIL TLQ              I+  ELEQALLVL ++  E L  FL RLLA G EVEL AR AIFLLR HQA+I++  S+V  L ALR  LRR+LE  +D +G N+AGL M+
Sbjct:   33 EVWSLAVSNDGSFLISGSHDRSLRVWERTDEPVFLEEEREKEMEAMFEE-----------GLGQPDRDA--EENQEG----------ESALASKRTIESVRSGERLMDAIEIAVSEEEAIEEHEKKNKKLDKKGQPRLKDRQPNPLMLGKSPLAYILFTLQ-------------QIRPAELEQALLVLSYTFAEPLISFLQRLLARGAEVELAARAAIFLLRTHQAQIIAHHSLVGELTALRWALRRRLEGQKDLLGTNLAGLVMI 262          
BLAST of mRNA_H-elongata_contig87132.16260.1 vs. uniprot
Match: A0A5D6Y6H3_9STRA (Utp12 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y6H3_9STRA)

HSP 1 Score: 174 bits (441), Expect = 2.050e-45
Identity = 121/285 (42.46%), Postives = 166/285 (58.25%), Query Frame = 0
Query:    1 QAWALEVSADGSFVLSGGHDRSLRIWRRTDEMVFLEEEREKELEGLFEAELDRDD----VAGAAGFAPPSKPVGEVEGDEGVEAANGGAQAESGPATKRSIESVKAGERLMDALELA-AQEEKLMRADEKAAARAKQKGEPAPGVRRPNPVLLNLFPLRYILRTLQARGDSGSRYPSCSMIKTPELEQALLVLPFSQVENLAKFLVRLLAAGLEVELCARCAIFLLRVHQARIVSSGSMVAVLDALRGNLRRQLEASRDAVGCNMAGLRMLGRIVEQERTAYMME 280
            + W L VSADGSFV+S   DRSL  + RT++ VFLEEEREKE+E LFE EL +        G  G A  S   GE E  EG     GGA A    A KR++ESVKAGE LM+A+ELA A+   +   +++AA +AK    PA   R PN +LL   PL+Y+L  L+              ++  E+E+AL+VLPF  VE L   L++L+++ LEVE C    ++LL++H   I +   +   L+ L   LRRQL   ++ +G N+AGLR L R V+ ERT ++ E
Sbjct:  677 EVWGLAVSADGSFVVSCSQDRSLVKYVRTEDQVFLEEEREKEMEQLFEDELSKSSRGAPALGGKGLATDSSKAGEGEDAEG-----GGASAS---AAKRTVESVKAGESLMEAVELADAELAAIAEYEKRAAKKAKDPKAPALAPRTPNILLLGYSPLKYVLNALRR-------------VRPHEMEEALIVLPFEHVEKLIGLLLQLISSHLEVEFCCNVLLYLLKLHHTAICNRKQLFNELELLWQRLRRQLVDKKNRIGFNLAGLRYLKRQVDDERTGFVQE 940          
BLAST of mRNA_H-elongata_contig87132.16260.1 vs. uniprot
Match: A0A1V9ZSC5_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZSC5_9STRA)

HSP 1 Score: 166 bits (421), Expect = 8.940e-43
Identity = 110/281 (39.15%), Postives = 170/281 (60.50%), Query Frame = 0
Query:    1 QAWALEVSADGSFVLSGGHDRSLRIWRRTDEMVFLEEEREKELEGLFEAELDRDDVAGAAGFAPPSKPVGEVEGDEGVEAANGGAQAESGPATKRSIESVKAGERLMDALELAAQEEKLMRADEKAAARAKQKGEPAPGVRRPNPVLLNLFPLRYILRTLQARGDSGSRYPSCSMIKTPELEQALLVLPFSQVENLAKFLVRLLAAGLEVELCARCAIFLLRVHQARIVSSGSMVAVLDALRGNLRRQLEASRDAVGCNMAGLRMLGRIVEQERTAYMMES 281
            + WA+ V+ DGSFV+S   DRSL  + R+D+ VF+EEE+EKELE +FEA+L+  + A     AP             +  AN   +AES  A+K+++++VK+GERL++A++LA  + K   AD+             PG    N ++L   PL+++LR L+              I+  +LE+ALLVLPF  VE L KFL++L+AAGLEVELC    +FL++VH  +IV++ S++  LDAL  +LR  L A ++ +G N+AG++ + R V+  +TA+  E+
Sbjct:  651 EVWAIAVARDGSFVVSASQDRSLVKYARSDDQVFIEEEKEKELEAMFEADLNPTNTA-----APT------------LNGANAVVEAESATASKKTVQTVKSGERLIEAIDLAEHDRK---ADK-------------PGT---NILMLGYSPLKFVLRALRE-------------IRAQDLEEALLVLPFDYVEKLIKFLLQLIAAGLEVELCCSSVLFLVKVHHNQIVANTSLLGELDALWHSLRTSLVAGKNRIGFNLAGMKYIKRQVDASKTAFFEEA 882          
BLAST of mRNA_H-elongata_contig87132.16260.1 vs. uniprot
Match: T0QHH9_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QHH9_SAPDV)

HSP 1 Score: 163 bits (412), Expect = 1.500e-41
Identity = 107/280 (38.21%), Postives = 165/280 (58.93%), Query Frame = 0
Query:    1 QAWALEVSADGSFVLSGGHDRSLRIWRRTDEMVFLEEEREKELEGLFEAELDRDDVAGAAGFAPPSKPVGEVEGDEGVEAANGGAQAESGPATKRSIESVKAGERLMDALELAAQEEKLMRADEKAAARAKQKGEPAPGVRRPNPVLLNLFPLRYILRTLQARGDSGSRYPSCSMIKTPELEQALLVLPFSQVENLAKFLVRLLAAGLEVELCARCAIFLLRVHQARIVSSGSMVAVLDALRGNLRRQLEASRDAVGCNMAGLRMLGRIVEQERTAYMME 280
            + WA+ V+ DGSF++S   DRSL  + R+D+ VF+EEE+EKELE +FEA+L+  + +     AP             +  AN   +AES  ATK++I++VK+GERL++A++LA  E K                   PG    N +LL   PL+Y+LR+L+              I+  +LE+ALLVLPF  V+ L K+L++L+AA LEVELC    +FL++VH  +IV++ S++  LD L  +LR  L ++++ +G N+AG++ + R VE  +T Y  E
Sbjct:  666 EVWAIAVARDGSFLISASQDRSLVKYARSDDQVFIEEEKEKELEAMFEADLNPSNTS-----APT------------LNGANTVLEAESATATKKTIQTVKSGERLIEAIDLAEHEAKAA----------------TPGG---NILLLGFSPLKYVLRSLRE-------------IRAQDLEEALLVLPFDYVQKLIKYLLQLIAAELEVELCCNSILFLVKVHHNQIVANASLLGELDTLWHSLRTNLVSAKNQIGFNLAGMKFIKRQVEANKTGYFEE 896          
BLAST of mRNA_H-elongata_contig87132.16260.1 vs. uniprot
Match: A0A024UV74_9STRA (Utp12 domain-containing protein n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A024UV74_9STRA)

HSP 1 Score: 158 bits (400), Expect = 6.140e-40
Identity = 107/295 (36.27%), Postives = 169/295 (57.29%), Query Frame = 0
Query:    1 QAWALEVSADGSFVLSGGHDRSLRIWRRTDEMVFLEEEREKELEGLFEAELDRDDVAGAAGFAPPSKPVGEVEGDEGVEAANGGAQAESGPATKRSIESVKAGERLMDALELAAQEEKLMRADEKAAARAKQKGEPAPGVRRPNPVLLNLFPLRYILRTLQARGDSGSRYPSCSMIKTPELEQALLVLPFSQVENLAKFLVRLLAAGLEVELCARCAIFLLRVHQARIVSSGSMVAVLDALRGNLRRQLEASRDAVGCNMAGLRMLGRIVEQERTAYMMESEEDRLVKKMRQPSV 295
            + WA+ VS DGSFV+S   DRSL  + R D+ VF+EEE+EKEL+ +FE++L   + A     AP        E D    AA            KR++++VK+GERL++A+++A +E               QK    P V   N +LL   PL+++LR+++              I+  E+E+AL+VLPF  V+ L  +L++L+AA +EVE+C  C +FLLRVH  +IV++  ++  LD + G+LR QL +S++ +G N+AG++ + R V+Q +T Y+ E       KK ++ SV
Sbjct:  657 EVWAVAVSRDGSFVVSASQDRSLVKYTRGDDQVFVEEEKEKELDAMFESDLQPTNTA-----APTLGGTNVKEMDSSTTAA------------KRTVQTVKSGERLIEAIDIADREILA------------QKNSSNPDVVSTNFMLLGYAPLKFVLRSVRE-------------IRANEMEEALMVLPFEYVKKLLSYLLQLIAAEMEVEICCNCILFLLRVHHHQIVTNTILLGELDTMWGSLRAQLVSSKNRIGFNLAGMKYIKRQVDQTKTGYIEELGAAPATKKTKKQSV 909          
BLAST of mRNA_H-elongata_contig87132.16260.1 vs. uniprot
Match: A0A485L7V7_9STRA (Aste57867_17075 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L7V7_9STRA)

HSP 1 Score: 156 bits (395), Expect = 2.890e-39
Identity = 99/280 (35.36%), Postives = 168/280 (60.00%), Query Frame = 0
Query:    1 QAWALEVSADGSFVLSGGHDRSLRIWRRTDEMVFLEEEREKELEGLFEAELDRDDVAGAAGFAPPSKPVGEVEGDEGVEAANGGAQAESGPATKRSIESVKAGERLMDALELAAQEEKLMRADEKAAARAKQKGEPAPGVRRPNPVLLNLFPLRYILRTLQARGDSGSRYPSCSMIKTPELEQALLVLPFSQVENLAKFLVRLLAAGLEVELCARCAIFLLRVHQARIVSSGSMVAVLDALRGNLRRQLEASRDAVGCNMAGLRMLGRIVEQERTAYMME 280
            + WAL V+ DGSFV+S   DRSL  + R ++ VF+EEE+EKELE +FE++L+            P+       G   V+A       ES  A+KR++++VK+GERL++A+++A +E K  ++ E +                 N +LL   PL+++LR+++              I+  E+E+AL+VLPF  V+ L  +L++L+AA +EVE+C  C +FLLR+H  +IV+S +++  LD++  +LR QL  S++ +G N+AG++ + R ++Q +TA++ E
Sbjct:  671 EVWALAVAHDGSFVVSASQDRSLVKYARGEDQVFVEEEKEKELEAMFESDLN------------PTNTAAPTLGGLNVKAPE-----ESTTASKRTVQTVKSGERLIEAIDVADRELKQNKSGEASTT---------------NFMLLGFTPLKFVLRSVRE-------------IRANEMEEALMVLPFEYVKKLLSYLLQLIAAEMEVEICCNCVLFLLRLHHHQIVASTTLLGELDSMWSSLRNQLVTSKNRIGFNLAGMKYIKRQIDQHKTAFVEE 905          
BLAST of mRNA_H-elongata_contig87132.16260.1 vs. uniprot
Match: W7T9A4_9STRA (Beta transducin trp-asp domain-containing n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T9A4_9STRA)

HSP 1 Score: 148 bits (374), Expect = 3.620e-39
Identity = 107/283 (37.81%), Postives = 152/283 (53.71%), Query Frame = 0
Query:    1 QAWALEVSADGSFVLSGGHDRSLRIWRRTDEMVFLEEEREKELEGLFEAELDRDDVAGAAGFAPPSKPVGEVEGDEGVEAANGGAQAESGPATKRSIESVKAGERLMDALELAAQEEKLMRADEKAAARAKQK-GEPAPGVRRPNPVLLNLFPLRYILRTLQARGDSGSRYPSCSMIKTPELEQALLVLPFSQVENLAKFLVRLLAAGLEVELCARCAIFLLRVHQARIVSSGSMVAVLDALRGNLRRQLEASRDAVGCNMAGLRMLGRIVEQERTAYMMESE 282
            + WA+ V   G  + +GG DRS+R+W R+D+ VF+EEER++ELE +FE      D  G  G            G+E                  + +ESVK GERL +ALE+   +  L     K    A+QK G P P  R PNP++LNL P R++L  L+             ++K P+LEQALLVLP   +  L + L RLL   +EVELC RC +FL R H   ++ S  ++ +L  LRG LR +L+  RD V  N+ GLR+L R VE+ + A+++  E
Sbjct:   41 EVWAMGVEGGGEVLATGGADRSVRVWERSDDQVFVEEERQRELEEMFE------DGVGKEG-----------RGEEXXXXXX------XXXXXXQHLESVKQGERLSEALEVMRADNGLEEEHLKFLKAARQKPGAPLPPPRAPNPLMLNLPPHRFLLFHLR-------------LLKGPDLEQALLVLPLDLMHLLLRGLCRLLREDMEVELCWRCLLFLFRTHHRLLLHSRDLMPLLMDLRGGLRERLKGFRDGVAMNVEGLRLLKREVEEGKQAFLVPGE 287          
BLAST of mRNA_H-elongata_contig87132.16260.1 vs. uniprot
Match: A0A1Z5JEM4_FISSO (U3 small nucleolar RNA-associated protein 12 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JEM4_FISSO)

HSP 1 Score: 152 bits (383), Expect = 1.240e-37
Identity = 103/281 (36.65%), Postives = 167/281 (59.43%), Query Frame = 0
Query:    4 ALEVSADGSFVLSGGHDRSLRIWRRTDEMVFLEEEREKELEGLFEAELDRDDVAGAAGFAPPSKPVGEVEGDEGVEAANGGAQAESGPATKRSIESVKAGERLMDALELAAQEEKLMRADEKAAARAKQKGEPAPGVRRPNPVLLNLFPLRYILRTLQARGDSGSRYPSCSMIKTPELEQALLVLPFSQVENLAKFLVRLLAAGLEVELCARCAIFLLRVHQARIVSSGSMVAVLDALRGNLRRQLEASRDAVGCNMAGLRMLGRIVEQERTAYMMESEED 284
            +L VS  G+FVLSGG DR +R+W RT ++VF+EEERE+E+E +F+   DRD+   AA     S+  G  E +E    +N   Q+E+  A ++S+ SV +G+R+M+ALE A QE K +           +K   A   R+PNP++LN+ P  Y+L  L+              +++ ELEQ+LLVLP S +E L  +++ LL  G  VELC++ A+F+++ HQ +I+++ S+   L  L+  +R++L   RD +G ++A ++++ R+   ER   M   +ED
Sbjct:  777 SLAVSRTGAFVLSGGMDRQVRVWERTKDIVFIEEEREREMEQMFDRVNDRDEGGTAAIL---SRKRGNDEDEESESGSNDEPQSEA--AVRKSVLSVSSGDRIMEALEQADQETKNIALF--------RKTHGADATRQPNPLMLNMEPANYVLWVLKT-------------VRSAELEQSLLVLPVSHLERLLYYMIVLLRNGRGVELCSKVAVFMVKSHQNQIIANKSLAVPLRELKRLIRQRLGELRDMIGYDIAAMKVIARVAH-ERKLAMAPIQED 1030          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig87132.16260.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS39_ECTSI9.000e-12674.92Utp12 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A7S3XPK1_HETAK1.400e-6147.84Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3XPJ0_HETAK1.990e-5948.87Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A5D6Y6H3_9STRA2.050e-4542.46Utp12 domain-containing protein n=1 Tax=Pythium br... [more]
A0A1V9ZSC5_9STRA8.940e-4339.15Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
T0QHH9_SAPDV1.500e-4138.21Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A024UV74_9STRA6.140e-4036.27Utp12 domain-containing protein n=7 Tax=Aphanomyce... [more]
A0A485L7V7_9STRA2.890e-3935.36Aste57867_17075 protein n=1 Tax=Aphanomyces stella... [more]
W7T9A4_9STRA3.620e-3937.81Beta transducin trp-asp domain-containing n=1 Tax=... [more]
A0A1Z5JEM4_FISSO1.240e-3736.65U3 small nucleolar RNA-associated protein 12 n=2 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 113..133
NoneNo IPR availablePANTHERPTHR19853WD REPEAT CONTAINING PROTEIN 3 WDR3coord: 2..280
NoneNo IPR availablePANTHERPTHR19853:SF0WD REPEAT-CONTAINING PROTEIN 3coord: 2..280
IPR007148Small-subunit processome, Utp12PFAMPF04003Utp12coord: 176..266
e-value: 2.5E-15
score: 56.7
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1..26
score: 10.041
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..36
score: 9.283

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig87132contigH-elongata_contig87132:390..1815 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig87132.16260.1mRNA_H-elongata_contig87132.16260.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig87132 390..1815 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig87132.16260.1 ID=prot_H-elongata_contig87132.16260.1|Name=mRNA_H-elongata_contig87132.16260.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=298bp
QAWALEVSADGSFVLSGGHDRSLRIWRRTDEMVFLEEEREKELEGLFEAE
LDRDDVAGAAGFAPPSKPVGEVEGDEGVEAANGGAQAESGPATKRSIESV
KAGERLMDALELAAQEEKLMRADEKAAARAKQKGEPAPGVRRPNPVLLNL
FPLRYILRTLQARGDSGSRYPSCSMIKTPELEQALLVLPFSQVENLAKFL
VRLLAAGLEVELCARCAIFLLRVHQARIVSSGSMVAVLDALRGNLRRQLE
ASRDAVGCNMAGLRMLGRIVEQERTAYMMESEEDRLVKKMRQPSVNR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007148SSU_processome_Utp12
IPR001680WD40_repeat
IPR017986WD40_repeat_dom