prot_H-elongata_contig87069.16256.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig87069.16256.1
Unique Nameprot_H-elongata_contig87069.16256.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length404
Homology
BLAST of mRNA_H-elongata_contig87069.16256.1 vs. uniprot
Match: A0A6H5LEA1_9PHAE (Vesicle-fusing ATPase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LEA1_9PHAE)

HSP 1 Score: 566 bits (1458), Expect = 1.010e-194
Identity = 303/417 (72.66%), Postives = 335/417 (80.34%), Query Frame = 0
Query:    1 LRQAVRRTVERARQRSRHSDDSAMTWSWLTLSPRPVRVTLASG-DPRFGVYLTVLPAGKGSPPSHRPMYGCHMLSRVLAGEIEQVKSNSQRVIGRSTHSLETPVWSSYGGGARRLVNEGFLPAVILEVILYDWSRGSGYSGSYAAPGTSNSGSAERRAEADEIGAA--AIVKGTEIGAVST--RGVVSIVAMDACPCPPAALFRDGDVYDEEEDMDGRDGVRLALVRRDGKPMTAPAAGGQGGGASSDGLAGGSGFSELFTADELACDVGGLDSQLDDIVRRVLSTRSLPAELRQAL--------GVSHVRGLLLYGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELEHQRCVQIGEDPAGLPLNLVCFDEIDALCRRRGSLSGDTSGVRDSVVNQ 404
            L + VR  + RARQRSRHSD SA+ WSWLTLSPRPVRV +A+  D R GVYLTVLPAG G+PPSHRPMYGCH+LSRVLAGE+EQVKSNS+RVIGRSTHSLETPVWSS+GGGARRL+NE F PAVILEV++YDWSRGSGYSGSYAAPGTS+SGSAE RAEA+ +G A  A V+G   G  S    G++ IVAMD+CPCPPA LFRDGDVY EE          L LVR DG  +    A G+        + GG G  +L TAD LACDVGGLD QL+DIVRRVLSTRS+P E+            GV HVRGLLL+GPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAEL+H+RCVQ+GEDPAGLPLNL+CFDEIDALCR RGSLSGDTSGVRDSVVNQ
Sbjct:  167 LLEGVRAVLSRARQRSRHSDGSALAWSWLTLSPRPVRVAVATPEDGRVGVYLTVLPAGNGNPPSHRPMYGCHILSRVLAGEVEQVKSNSKRVIGRSTHSLETPVWSSFGGGARRLINESFQPAVILEVVMYDWSRGSGYSGSYAAPGTSSSGSAELRAEAEGVGRAEAAGVEGDGGGESSPAENGILPIVAMDSCPCPPALLFRDGDVY-EEXXXXXXXXXXLTLVRSDGGVVEQGRAAGE--------VVGG-GVEDLLTADGLACDVGGLDGQLEDIVRRVLSTRSIPTEVGHGTARYGAVRCGVGHVRGLLLHGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELDHERCVQMGEDPAGLPLNLICFDEIDALCRSRGSLSGDTSGVRDSVVNQ 573          
BLAST of mRNA_H-elongata_contig87069.16256.1 vs. uniprot
Match: A0A836CBN6_9STRA (Vesicle-fusing ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBN6_9STRA)

HSP 1 Score: 355 bits (912), Expect = 2.200e-112
Identity = 207/388 (53.35%), Postives = 246/388 (63.40%), Query Frame = 0
Query:   22 SAMTWSWLTLSPRPVRVTLASGDPRFGVYLTVLPAGKGSPPSHRPMYGCHMLSRVLAGEIEQVKSNSQRVIGRSTHSLETPVWSSYGGGARRLVNEGFLPAVILEVILYDWSRGSGYSGSYAAPGTSNSGSAERRAEADEIGAAAIVKGTEIGAVSTRGVVSIVAMDACPCPPAALFRD-----GDVYDEEEDMDGRDGVRLALVRRDGKPMTAPAAGGQGGGASSDGLAGGSGFSELFTADELACDVGGLDSQLDDIVRRVLSTRSLPAELRQALGVSHVRGLLLYGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELEHQRCVQIGEDPAGLPLNLVCFDEIDALCRRRGSLSGDTSGVRDSVVNQ 404
            +++ WSWL LS  P+RV L  G   FGV LTVLP G   PP+HRPM G HMLS V  G++EQVK+N QR+I R+ H+ ETP+W+S+GGG RRL N     A ILEV+ Y   RG     + A  G    G+AER AEADE     I+ G            ++  + A PC P  LFR      GD   E   + GR+G  L                                         LA  VGGLD+QL++IVRRVL+TR+LPA++RQALGVSHVRGLLLYGPPGCGKTLLAREL+RRL ARPP+LVSGPE+LDKWVGEAERKVR LF  AE EH+RCV+ G DPA LPL+++CFDE+DALCR RGSL GDTSGVRDSVVNQ
Sbjct:  158 ASLAWSWLGLSTMPLRVMLHQGG-GFGVLLTVLPPG-AKPPAHRPMIGAHMLSIVCQGDVEQVKANGQRIINRTRHTPETPIWNSFGGGVRRLANMSVTTAYILEVLFYG-KRGPPEYDTRAPDG----GAAERNAEADEF----ILSGPR----------AMATLSAPPCDPEVLFRSVGEEGGDEGGEVLVIRGREGSLLLGXXXXXXXXXXXX------------------XXXXVVGASLATSVGGLDTQLEEIVRRVLATRALPADVRQALGVSHVRGLLLYGPPGCGKTLLARELARRLKARPPQLVSGPEVLDKWVGEAERKVRALFAAAEEEHERCVRGGGDPADLPLHVICFDELDALCRTRGSLLGDTSGVRDSVVNQ 506          
BLAST of mRNA_H-elongata_contig87069.16256.1 vs. uniprot
Match: A0A1E7FWZ3_9STRA (Vesicle-fusing ATPase (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWZ3_9STRA)

HSP 1 Score: 176 bits (447), Expect = 1.190e-49
Identity = 91/141 (64.54%), Postives = 117/141 (82.98%), Query Frame = 0
Query:  264 VGGLDSQLDDIVRRVLSTRSLPAELRQALGVSHVRGLLLYGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELEHQRCVQIGEDPAGLPLNLVCFDEIDALCRRRGSLSGDTSGVRDSVVNQ 404
            VGGLD QL+DIVRRVL++R+   +L + LGV+HVRG+LL GPPGCGKTLLARELS  LGAR P++V+GPEILDK++GEAE+ VR LF  AELE++   Q+G+D A   L+++  DE+DA+ RRRGS+SGD++GVRDSVVNQ
Sbjct:    8 VGGLDGQLNDIVRRVLASRA-NRDLSRRLGVNHVRGILLSGPPGCGKTLLARELSEMLGAREPQIVNGPEILDKFIGEAEKNVRQLFEPAELEYE---QVGDDSA---LHVIILDELDAIARRRGSVSGDSTGVRDSVVNQ 141          
BLAST of mRNA_H-elongata_contig87069.16256.1 vs. uniprot
Match: A0A7S1ZM88_TRICV (Vesicle-fusing ATPase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZM88_TRICV)

HSP 1 Score: 175 bits (444), Expect = 5.010e-49
Identity = 93/141 (65.96%), Postives = 115/141 (81.56%), Query Frame = 0
Query:  264 VGGLDSQLDDIVRRVLSTRSLPAELRQALGVSHVRGLLLYGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELEHQRCVQIGEDPAGLPLNLVCFDEIDALCRRRGSLSGDTSGVRDSVVNQ 404
            VGGLDSQLD I RRVL++R+ PA  R+ LGVSHVRG+LL GPPGCGKTLLARELSR LGAR P++V+GPEILDK++GEAE+KVR LF  AE E+     +G+D A   L+++  DE+DA+ RRRGS++ DT+GVRDSVVNQ
Sbjct:    8 VGGLDSQLDSIARRVLASRANPAAARR-LGVSHVRGVLLSGPPGCGKTLLARELSRVLGAREPQIVNGPEILDKFIGEAEKKVRDLFAPAEEEY---ALMGDDSA---LHIIILDEMDAIARRRGSMTSDTTGVRDSVVNQ 141          
BLAST of mRNA_H-elongata_contig87069.16256.1 vs. uniprot
Match: A0A8J9TMG8_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TMG8_PHATR)

HSP 1 Score: 168 bits (425), Expect = 2.090e-46
Identity = 88/141 (62.41%), Postives = 114/141 (80.85%), Query Frame = 0
Query:  264 VGGLDSQLDDIVRRVLSTRSLPAELRQALGVSHVRGLLLYGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELEHQRCVQIGEDPAGLPLNLVCFDEIDALCRRRGSLSGDTSGVRDSVVNQ 404
            VGGLD QL+ I RRVL++R+ PA  R+ LGVSHVRG+LL GPPGCGKTLLAREL+R LGAR P++V+GPEILDK++GEAER+VR LF  AE E++     G+D A   L+++  DE+DA+ R+RG+++ DT+GVRDSVVNQ
Sbjct:    6 VGGLDVQLEAIARRVLASRANPAAARR-LGVSHVRGILLSGPPGCGKTLLARELARILGAREPQIVNGPEILDKYIGEAERRVRDLFAPAEQEYKVA---GDDSA---LHIIILDEMDAIARKRGTMTSDTTGVRDSVVNQ 139          
BLAST of mRNA_H-elongata_contig87069.16256.1 vs. uniprot
Match: A0A7S2M5J1_9STRA (Vesicle-fusing ATPase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M5J1_9STRA)

HSP 1 Score: 179 bits (455), Expect = 5.240e-46
Identity = 92/141 (65.25%), Postives = 117/141 (82.98%), Query Frame = 0
Query:  264 VGGLDSQLDDIVRRVLSTRSLPAELRQALGVSHVRGLLLYGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELEHQRCVQIGEDPAGLPLNLVCFDEIDALCRRRGSLSGDTSGVRDSVVNQ 404
            VGGLD QLDDI RRVL++R+ PA  R+ LGVSHVRG+LL GPPGCGKTLLARELSR LGAR P++V+GPEILDK++GEAER+VR LF+ AE E++   ++G+  A   L+++  DE+DA+ R+RGS+S DT+GVRDSVVNQ
Sbjct:  368 VGGLDKQLDDIARRVLASRANPAAARK-LGVSHVRGILLSGPPGCGKTLLARELSRLLGAREPQIVNGPEILDKFIGEAERRVRELFIPAEREYE---EVGDSSA---LHIIILDEMDAIARKRGSMSSDTTGVRDSVVNQ 501          
BLAST of mRNA_H-elongata_contig87069.16256.1 vs. uniprot
Match: A0A8J2SL94_9STRA (Vesicle-fusing ATPase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SL94_9STRA)

HSP 1 Score: 178 bits (451), Expect = 1.220e-45
Identity = 97/151 (64.24%), Postives = 118/151 (78.15%), Query Frame = 0
Query:  254 LFTADELACDVGGLDSQLDDIVRRVLSTRSLPAELRQALGVSHVRGLLLYGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELEHQRCVQIGEDPAGLPLNLVCFDEIDALCRRRGSLSGDTSGVRDSVVNQ 404
            L T + L   VGGL+ QLD IVRRVL++R+ P E  + LGV HVRG+LL GPPGCGKTLLAREL+R LGAR P++V+GPEILDK+VGEAERKVR LF  AE E +   Q+G+  A   L++V FDE+DA+ RRRGSL+GDT+GVRD VVNQ
Sbjct:  313 LLTQEALRERVGGLEQQLDAIVRRVLASRASP-EAAKRLGVGHVRGVLLSGPPGCGKTLLARELARALGAREPQIVNGPEILDKFVGEAERKVRELFAPAEAEFR---QVGDASA---LHVVVFDEMDAIARRRGSLTGDTTGVRDGVVNQ 456          
BLAST of mRNA_H-elongata_contig87069.16256.1 vs. uniprot
Match: A0A7S3QJ62_9STRA (Vesicle-fusing ATPase (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJ62_9STRA)

HSP 1 Score: 176 bits (445), Expect = 1.080e-44
Identity = 89/141 (63.12%), Postives = 117/141 (82.98%), Query Frame = 0
Query:  264 VGGLDSQLDDIVRRVLSTRSLPAELRQALGVSHVRGLLLYGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELEHQRCVQIGEDPAGLPLNLVCFDEIDALCRRRGSLSGDTSGVRDSVVNQ 404
            VGGLDSQLD IVRRVL++R+ P   R+ LG+SHVRG+LL GPPGCGKTLLAREL+R LGAR P++V+GPEILDK++GEAE++VR LF+ AE+E+    Q+G++ A   L+++  DE+DA+ R+RGS +GD +GVRDSVVNQ
Sbjct:  342 VGGLDSQLDTIVRRVLASRANPEAARR-LGISHVRGILLSGPPGCGKTLLARELARLLGAREPQIVNGPEILDKFIGEAEKRVRQLFVPAEMEY---AQVGDESA---LHIIILDEMDAIARKRGSSAGDNTGVRDSVVNQ 475          
BLAST of mRNA_H-elongata_contig87069.16256.1 vs. uniprot
Match: A0A448ZKH4_9STRA (Vesicle-fusing ATPase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZKH4_9STRA)

HSP 1 Score: 175 bits (443), Expect = 2.170e-44
Identity = 91/141 (64.54%), Postives = 115/141 (81.56%), Query Frame = 0
Query:  264 VGGLDSQLDDIVRRVLSTRSLPAELRQALGVSHVRGLLLYGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELEHQRCVQIGEDPAGLPLNLVCFDEIDALCRRRGSLSGDTSGVRDSVVNQ 404
            VGGLD QL+DIVRRVL++R+ P E+ + LGV HVRG+LL GPPGCGKTLLARELS  LGAR P++V+GPEILDK+VGEAE+ VR LF  AE+E+    Q+G+  A   L+++  DE+DA+ RRRGS+SGD++GVRDSVVNQ
Sbjct:  357 VGGLDDQLNDIVRRVLASRANP-EMTRKLGVKHVRGILLSGPPGCGKTLLARELSAMLGAREPQIVNGPEILDKFVGEAEKNVRALFRPAEVEYD---QVGDASA---LHVIILDELDAIARRRGSVSGDSTGVRDSVVNQ 490          
BLAST of mRNA_H-elongata_contig87069.16256.1 vs. uniprot
Match: A0A7S4AUL9_9STRA (Vesicle-fusing ATPase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AUL9_9STRA)

HSP 1 Score: 175 bits (443), Expect = 2.210e-44
Identity = 91/141 (64.54%), Postives = 116/141 (82.27%), Query Frame = 0
Query:  264 VGGLDSQLDDIVRRVLSTRSLPAELRQALGVSHVRGLLLYGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLFLDAELEHQRCVQIGEDPAGLPLNLVCFDEIDALCRRRGSLSGDTSGVRDSVVNQ 404
            VGGLD QL+DIVRRVL++R+ P E+ + LGV+HVRG+LL GPPGCGKTLLARELS  LGAR P++V+GPEILDK+VGEAE+ VR LF  AE+E+    Q+G+  A   L+++  DE+DA+ RRRGS+SGD++GVRDSVVNQ
Sbjct:  362 VGGLDDQLNDIVRRVLASRANP-EVARRLGVNHVRGILLSGPPGCGKTLLARELSSMLGAREPQIVNGPEILDKFVGEAEKNVRALFRPAEVEYD---QVGDASA---LHVIVLDELDAIARRRGSVSGDSTGVRDSVVNQ 495          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig87069.16256.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LEA1_9PHAE1.010e-19472.66Vesicle-fusing ATPase n=2 Tax=Ectocarpus TaxID=287... [more]
A0A836CBN6_9STRA2.200e-11253.35Vesicle-fusing ATPase n=1 Tax=Tribonema minus TaxI... [more]
A0A1E7FWZ3_9STRA1.190e-4964.54Vesicle-fusing ATPase (Fragment) n=1 Tax=Fragilari... [more]
A0A7S1ZM88_TRICV5.010e-4965.96Vesicle-fusing ATPase (Fragment) n=1 Tax=Trieres c... [more]
A0A8J9TMG8_PHATR2.090e-4662.41Hypothetical protein (Fragment) n=2 Tax=Phaeodacty... [more]
A0A7S2M5J1_9STRA5.240e-4665.25Vesicle-fusing ATPase n=1 Tax=Skeletonema marinoi ... [more]
A0A8J2SL94_9STRA1.220e-4564.24Vesicle-fusing ATPase n=1 Tax=Pelagomonas calceola... [more]
A0A7S3QJ62_9STRA1.080e-4463.12Vesicle-fusing ATPase (Fragment) n=1 Tax=Chaetocer... [more]
A0A448ZKH4_9STRA2.170e-4464.54Vesicle-fusing ATPase n=1 Tax=Pseudo-nitzschia mul... [more]
A0A7S4AUL9_9STRA2.210e-4464.54Vesicle-fusing ATPase n=1 Tax=Pseudo-nitzschia aus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 300..404
e-value: 3.8E-18
score: 66.2
NoneNo IPR availableGENE3D3.40.50.300coord: 261..404
e-value: 3.3E-26
score: 94.1
IPR039812Vesicle-fusing ATPasePANTHERPTHR23078VESICULAR-FUSION PROTEIN NSFcoord: 264..404
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 260..404

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig87069contigH-elongata_contig87069:1..2429 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig87069.16256.1mRNA_H-elongata_contig87069.16256.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig87069 1..2429 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig87069.16256.1 ID=prot_H-elongata_contig87069.16256.1|Name=mRNA_H-elongata_contig87069.16256.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=404bp
LRQAVRRTVERARQRSRHSDDSAMTWSWLTLSPRPVRVTLASGDPRFGVY
LTVLPAGKGSPPSHRPMYGCHMLSRVLAGEIEQVKSNSQRVIGRSTHSLE
TPVWSSYGGGARRLVNEGFLPAVILEVILYDWSRGSGYSGSYAAPGTSNS
GSAERRAEADEIGAAAIVKGTEIGAVSTRGVVSIVAMDACPCPPAALFRD
GDVYDEEEDMDGRDGVRLALVRRDGKPMTAPAAGGQGGGASSDGLAGGSG
FSELFTADELACDVGGLDSQLDDIVRRVLSTRSLPAELRQALGVSHVRGL
LLYGPPGCGKTLLARELSRRLGARPPKLVSGPEILDKWVGEAERKVRLLF
LDAELEHQRCVQIGEDPAGLPLNLVCFDEIDALCRRRGSLSGDTSGVRDS
VVNQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003959ATPase_AAA_core
IPR039812Vesicle-fus_ATPase
IPR027417P-loop_NTPase