prot_H-elongata_contig87060.16254.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig87060.16254.1
Unique Name	prot_H-elongata_contig87060.16254.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	172

Homology

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BLAST of mRNA_H-elongata_contig87060.16254.1 vs. uniprot
Match: A0A6H5LCT9_9PHAE (TTC5_OB domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCT9_9PHAE)

HSP 1 Score: 266 bits (681), Expect = 5.620e-83
Identity = 128/173 (73.99%), Postives = 146/173 (84.39%), Query Frame = 0

Query:    1 RGRALDVFSDFDPEAERCLARAVKLHPSEPDGWTALGHCYWKKKDLLTAKRCFLQALDKGRKPDSLRQLSMLLRQLPGTPQESSAHLQESLRLAKEAVKLDAGSGDSWYVLGNAYVTSFFRLTGGMKDLDRALQAYKRAES-SDVKRNPDLFFNRAQVLQYRQDYPEAIRDYR 172
            RGRALDVF+ F+P AE+CLA+AVKLHPS+PDGWTALGHCYWKK DL  AKRCFL +L+K RK D+LRQLSMLLRQ+PGT +E  A +QESLR AKEAV LD G GDSWYVLGN YV SFFR + G+KDLDRALQAYK+AE+    + NPDLFFNRAQV QYR+DYPE+IRD R
Sbjct:  175 RGRALDVFTKFNPAAEKCLAKAVKLHPSDPDGWTALGHCYWKKPDLFAAKRCFLTSLEKARKADTLRQLSMLLRQMPGTAEEKGAQVQESLRFAKEAVTLDIGCGDSWYVLGNGYVASFFRSSRGIKDLDRALQAYKKAEAYGGEEGNPDLFFNRAQVFQYREDYPESIRDLR 347

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BLAST of mRNA_H-elongata_contig87060.16254.1 vs. uniprot
Match: D7G7M4_ECTSI (TTC5_OB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7M4_ECTSI)

HSP 1 Score: 260 bits (664), Expect = 6.950e-82
Identity = 126/173 (72.83%), Postives = 144/173 (83.24%), Query Frame = 0

Query:    1 RGRALDVFSDFDPEAERCLARAVKLHPSEPDGWTALGHCYWKKKDLLTAKRCFLQALDKGRKPDSLRQLSMLLRQLPGTPQESSAHLQESLRLAKEAVKLDAGSGDSWYVLGNAYVTSFFRLTGGMKDLDRALQAYKRAES-SDVKRNPDLFFNRAQVLQYRQDYPEAIRDYR 172
            RGRALDVF+ F+P AE+CLA+AVKLHPSEPDGWTAL HCYWKK DL  AKRCFL +L+K RK D+L+QLSMLLRQ+PGT +E  A L+ESLRLAKEAV LD   G SWYVLGN YV SFF  + G+KDLDRALQAYK+AE+    K NPDLFFNRAQV QYR+DYPE+IRD+R
Sbjct:   33 RGRALDVFTKFNPNAEKCLAKAVKLHPSEPDGWTALAHCYWKKPDLFAAKRCFLTSLEKARKADTLQQLSMLLRQMPGTAEEKGAQLEESLRLAKEAVTLDVECGYSWYVLGNGYVASFFGSSRGIKDLDRALQAYKKAEAYGGEKGNPDLFFNRAQVFQYREDYPESIRDFR 205

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BLAST of mRNA_H-elongata_contig87060.16254.1 vs. uniprot
Match: T0S5G9_SAPDV (TTC5_OB domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S5G9_SAPDV)

HSP 1 Score: 179 bits (453), Expect = 1.710e-51
Identity = 86/171 (50.29%), Postives = 115/171 (67.25%), Query Frame = 0

Query:    1 RGRALDVFSDFDPEAERCLARAVKLHPSEPDGWTALGHCYWKKKDLLTAKRCFLQALDKGRKPDSLRQLSMLLRQLPGTPQESSAHLQESLRLAKEAVKLDAGSGDSWYVLGNAYVTSFFRLTGGMKDLDRALQAYKRAESSDVKRNPDLFFNRAQVLQYRQDYPEAIRDY 171
            +G+ALD F  +D  AE+ L++A KL P   D W ALG+C+WKK DLL AK CF   L+ G    +LR LSM+LR+L   P++ + H++ SL+ AK+AV LD   G+SWYVLGNAY+  FF  +    DLDR+L AY RAE +   +NPDL FNRA V +Y++DY EA+  Y
Sbjct:   70 KGKALDAFPSYDATAEQLLSQAAKLDPCNLDAWVALGNCFWKKGDLLVAKNCFENCLEYGSSKHALRSLSMVLRKLGTKPEDKADHVRASLQRAKQAVSLDLTDGESWYVLGNAYLALFFGDSHSTVDLDRSLAAYTRAEKAGAGQNPDLHFNRANVQRYKEDYAEAVASY 240

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BLAST of mRNA_H-elongata_contig87060.16254.1 vs. uniprot
Match: A0A1V9YGG6_9STRA (TTC5_OB domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGG6_9STRA)

HSP 1 Score: 177 bits (448), Expect = 9.070e-51
Identity = 88/171 (51.46%), Postives = 113/171 (66.08%), Query Frame = 0

Query:    1 RGRALDVFSDFDPEAERCLARAVKLHPSEPDGWTALGHCYWKKKDLLTAKRCFLQALDKGRKPDSLRQLSMLLRQLPGTPQESSAHLQESLRLAKEAVKLDAGSGDSWYVLGNAYVTSFFRLTGGMKDLDRALQAYKRAESSDVKRNPDLFFNRAQVLQYRQDYPEAIRDY 171
            +G+ALD F  +D  AE+ L++A KL P   D W ALG+C WKK DLL AK CF   L+ G    +LR LSM+LR+L   P++   H++ SL+ AK+AV LD   G+SWYVLGNAY+  FF  T    DLDR+L AY RAE +   RNPDL FNRA V +Y++DY EA+  Y
Sbjct:   68 KGKALDAFPIYDATAEQLLSQAAKLDPCNLDTWVALGNCLWKKGDLLMAKNCFENCLEYGLSKHALRSLSMVLRKLGTRPEDKVHHVRMSLQHAKQAVSLDLADGESWYVLGNAYLALFFGDTHSTIDLDRSLAAYTRAEKAGAGRNPDLHFNRANVFRYKEDYAEAVTSY 238

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BLAST of mRNA_H-elongata_contig87060.16254.1 vs. uniprot
Match: A0A067CIK2_SAPPC (TTC5_OB domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CIK2_SAPPC)

HSP 1 Score: 176 bits (445), Expect = 1.940e-50
Identity = 85/171 (49.71%), Postives = 115/171 (67.25%), Query Frame = 0

Query:    1 RGRALDVFSDFDPEAERCLARAVKLHPSEPDGWTALGHCYWKKKDLLTAKRCFLQALDKGRKPDSLRQLSMLLRQLPGTPQESSAHLQESLRLAKEAVKLDAGSGDSWYVLGNAYVTSFFRLTGGMKDLDRALQAYKRAESSDVKRNPDLFFNRAQVLQYRQDYPEAIRDY 171
            +G+ALD F  +D  AE+ L++A KL P   D W ALG+C+WKK DL+ AK CF   L+ G    +LR LSM+LR+L   P++ + H++ SL+ AK+AV LD   G+SWYVLGNAY+  FF  +    DLDR+L AY RAE +   +NPDL FNRA V +Y++DY EA+  Y
Sbjct:   70 KGKALDAFPSYDATAEQLLSQAAKLDPCNLDAWVALGNCFWKKGDLVLAKHCFENCLEYGSSKHALRSLSMVLRKLGTKPEDKADHVRASLQHAKQAVGLDLTDGESWYVLGNAYLALFFGDSHSTVDLDRSLAAYTRAEKAGAGQNPDLHFNRANVHRYKEDYAEAVASY 240

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BLAST of mRNA_H-elongata_contig87060.16254.1 vs. uniprot
Match: A0A7S3UMN7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UMN7_HETAK)

HSP 1 Score: 160 bits (406), Expect = 1.560e-47
Identity = 79/154 (51.30%), Postives = 104/154 (67.53%), Query Frame = 0

Query:   14 EAERCLARAVKLHPSEPDGWTALGHCYWKKKDLLTAKRCFLQALDKGRKPDSLRQLSMLLRQLPGTPQESSAHLQESLRLAKEAVKLDAGSGDSWYVLGNAYVTSFFRLTGGMKDLDRALQAYKRAESSDVKRNPDLFFNRAQVLQYRQDYPEA 167
            EAE  L +AVKL+P   D W  LGHC WKKKD L AK C+++AL++     SL++LSM+LRQ+PG  +    +L ESL  AK AV+LD     SWYVLGNA++T FF+ +    D+D+ALQAY+R+E      NPDLFFN+A VL Y++ Y  A
Sbjct:    2 EAEEHLQQAVKLNPDHLDSWNTLGHCLWKKKDFLGAKNCYMRALEQSTNKRSLQELSMVLRQIPGNSEVVLRNLVESLNRAKAAVELDLNDAKSWYVLGNAHMTRFFKASFSEADMDKALQAYQRSERLGGDTNPDLFFNKANVLMYKEAYQAA 155

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BLAST of mRNA_H-elongata_contig87060.16254.1 vs. uniprot
Match: W4H469_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H469_9STRA)

HSP 1 Score: 165 bits (417), Expect = 2.160e-47
Identity = 79/171 (46.20%), Postives = 112/171 (65.50%), Query Frame = 0

Query:    1 RGRALDVFSDFDPEAERCLARAVKLHPSEPDGWTALGHCYWKKKDLLTAKRCFLQALDKGRKPDSLRQLSMLLRQLPGTPQESSAHLQESLRLAKEAVKLDAGSGDSWYVLGNAYVTSFFRLTGGMKDLDRALQAYKRAESSDVKRNPDLFFNRAQVLQYRQDYPEAIRDY 171
            +G+AL+VF +++P +E  L++A KL P   D W  LG+C WKK DL  AK CF   LD G    +LR LSMLLR++   P+E S +++ S+  AK+A+ +D   G+SWYV+GNAY+  FF  +    DLDR+L AY RAE+     NPDL FNRA V +Y++DY  A++ +
Sbjct:   62 KGKALEVFPEYNPSSEALLSQAAKLDPCNLDIWVCLGNCLWKKGDLQAAKTCFENCLDYGPSKHALRSLSMLLRKMGTKPEEKSHNIKTSIVHAKQALNMDIQDGESWYVMGNAYLALFFASSHSTVDLDRSLAAYARAEAGGAANNPDLHFNRANVHRYKEDYALAVQSF 232

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BLAST of mRNA_H-elongata_contig87060.16254.1 vs. uniprot
Match: UPI0014553DA5 (tetratricopeptide repeat protein 5-like isoform X1 n=2 Tax=Asterias rubens TaxID=7604 RepID=UPI0014553DA5)

HSP 1 Score: 166 bits (419), Expect = 2.670e-46
Identity = 87/175 (49.71%), Postives = 114/175 (65.14%), Query Frame = 0

Query:    1 RGRALDVFSDFDPEAERCLARAVKLHPSEPDGWTALGHCYWKKKDLLTAKRCFLQALDKGRKPDSLRQLSMLLRQLPGTPQESSAHLQESLRLAKEAVKLDAGSGDSWYVLGNAYVTSFFRLTGGMKD--LDRALQAYKRAESSDV-KRNPDLFFNRAQVLQYRQDYPEAIRDYR 172
            RGRAL+V  +F  EA  CL++AVKL P   + W  LG CYWK KD+  A+ CF  AL+  R   SLR LSM+LRQL  T +E +  +QES+  AKEAV+LD G G SW++ GNAY+T FF   GG K   L + L AY +AE   V K NPDL+FNRA + ++++DY  A+  Y+
Sbjct:   72 RGRALNVMPEFSSEALECLSKAVKLDPKLVEAWNQLGECYWKNKDIEAARNCFNGALNHSRNKVSLRNLSMVLRQLGKTKEERAKFIQESVEHAKEAVQLDYGDGTSWFIAGNAYLTVFFN--GGQKSGILKQCLGAYSQAEKDTVQKSNPDLYFNRATIFKFQEDYVAALDGYK 244

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BLAST of mRNA_H-elongata_contig87060.16254.1 vs. uniprot
Match: W4H3U9_9STRA (TTC5_OB domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H3U9_9STRA)

HSP 1 Score: 165 bits (417), Expect = 3.220e-46
Identity = 79/171 (46.20%), Postives = 112/171 (65.50%), Query Frame = 0

Query:    1 RGRALDVFSDFDPEAERCLARAVKLHPSEPDGWTALGHCYWKKKDLLTAKRCFLQALDKGRKPDSLRQLSMLLRQLPGTPQESSAHLQESLRLAKEAVKLDAGSGDSWYVLGNAYVTSFFRLTGGMKDLDRALQAYKRAESSDVKRNPDLFFNRAQVLQYRQDYPEAIRDY 171
            +G+AL+VF +++P +E  L++A KL P   D W  LG+C WKK DL  AK CF   LD G    +LR LSMLLR++   P+E S +++ S+  AK+A+ +D   G+SWYV+GNAY+  FF  +    DLDR+L AY RAE+     NPDL FNRA V +Y++DY  A++ +
Sbjct:   63 KGKALEVFPEYNPSSEALLSQAAKLDPCNLDIWVCLGNCLWKKGDLQAAKTCFENCLDYGPSKHALRSLSMLLRKMGTKPEEKSHNIKTSIVHAKQALNMDIQDGESWYVMGNAYLALFFASSHSTVDLDRSLAAYARAEAGGAANNPDLHFNRANVHRYKEDYALAVQSF 233

[Close]

BLAST of mRNA_H-elongata_contig87060.16254.1 vs. uniprot
Match: W4H5Y4_9STRA (TTC5_OB domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H5Y4_9STRA)

HSP 1 Score: 165 bits (417), Expect = 3.500e-46
Identity = 79/171 (46.20%), Postives = 112/171 (65.50%), Query Frame = 0

Query:    1 RGRALDVFSDFDPEAERCLARAVKLHPSEPDGWTALGHCYWKKKDLLTAKRCFLQALDKGRKPDSLRQLSMLLRQLPGTPQESSAHLQESLRLAKEAVKLDAGSGDSWYVLGNAYVTSFFRLTGGMKDLDRALQAYKRAESSDVKRNPDLFFNRAQVLQYRQDYPEAIRDY 171
            +G+AL+VF +++P +E  L++A KL P   D W  LG+C WKK DL  AK CF   LD G    +LR LSMLLR++   P+E S +++ S+  AK+A+ +D   G+SWYV+GNAY+  FF  +    DLDR+L AY RAE+     NPDL FNRA V +Y++DY  A++ +
Sbjct:   67 KGKALEVFPEYNPSSEALLSQAAKLDPCNLDIWVCLGNCLWKKGDLQAAKTCFENCLDYGPSKHALRSLSMLLRKMGTKPEEKSHNIKTSIVHAKQALNMDIQDGESWYVMGNAYLALFFASSHSTVDLDRSLAAYARAEAGGAANNPDLHFNRANVHRYKEDYALAVQSF 237

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig87060.16254.1 vs. uniprot

BLAST of mRNA_H-elongata_contig87060.16254.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5LCT9_9PHAE	5.620e-83	73.99	TTC5_OB domain-containing protein n=1 Tax=Ectocarp...	[more]
D7G7M4_ECTSI	6.950e-82	72.83	TTC5_OB domain-containing protein n=1 Tax=Ectocarp...	[more]
T0S5G9_SAPDV	1.710e-51	50.29	TTC5_OB domain-containing protein n=1 Tax=Saproleg...	[more]
A0A1V9YGG6_9STRA	9.070e-51	51.46	TTC5_OB domain-containing protein n=1 Tax=Achlya h...	[more]
A0A067CIK2_SAPPC	1.940e-50	49.71	TTC5_OB domain-containing protein n=1 Tax=Saproleg...	[more]
A0A7S3UMN7_HETAK	1.560e-47	51.30	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
W4H469_9STRA	2.160e-47	46.20	Uncharacterized protein n=1 Tax=Aphanomyces astaci...	[more]
UPI0014553DA5	2.670e-46	49.71	tetratricopeptide repeat protein 5-like isoform X1...	[more]
W4H3U9_9STRA	3.220e-46	46.20	TTC5_OB domain-containing protein n=2 Tax=Aphanomy...	[more]
W4H5Y4_9STRA	3.500e-46	46.20	TTC5_OB domain-containing protein n=2 Tax=Aphanomy...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019734	Tetratricopeptide repeat	PFAM	PF13181	TPR_8	coord: 32..57 e-value: 0.0019 score: 18.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 1..172 e-value: 1.3E-65 score: 223.3
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 13..171
None	No IPR available	PANTHER	PTHR26312:SF129		coord: 1..169
None	No IPR available	PANTHER	PTHR26312	FAMILY NOT NAMED	coord: 1..169
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 14..172 score: 9.16

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig87060	contig	H-elongata_contig87060:113..2478 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig87060.16254.1	mRNA_H-elongata_contig87060.16254.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig87060 113..2478 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig87060.16254.1 ID=prot_H-elongata_contig87060.16254.1|Name=mRNA_H-elongata_contig87060.16254.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=172bp
RGRALDVFSDFDPEAERCLARAVKLHPSEPDGWTALGHCYWKKKDLLTAK
RCFLQALDKGRKPDSLRQLSMLLRQLPGTPQESSAHLQESLRLAKEAVKL
DAGSGDSWYVLGNAYVTSFFRLTGGMKDLDRALQAYKRAESSDVKRNPDL
FFNRAQVLQYRQDYPEAIRDYR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019734	TPR_repeat
IPR011990	TPR-like_helical_dom_sf
IPR013026	TPR-contain_dom