prot_H-elongata_contig87021.16253.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig87021.16253.1 vs. uniprot
Match: D8LL81_ECTSI (DNA-directed RNA polymerase subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL81_ECTSI) HSP 1 Score: 150 bits (379), Expect = 1.780e-45 Identity = 68/81 (83.95%), Postives = 76/81 (93.83%), Query Frame = 0
Query: 2 FGDVEVVTKSQDRPLPEWVVQLQRKGAKTELQRATVEEACPKCGHPRMEFYTMQLRSADEGQTVFYECLSKKCKHKYSLNN 82
FG+VEVVT+SQ+R PEW+VQ+QRKG K ELQRATVEEACPKCGHP+MEFYTMQLRSADEGQTVFYECLSK CKHKY++NN
Sbjct: 35 FGEVEVVTRSQNRAEPEWLVQIQRKGEKQELQRATVEEACPKCGHPKMEFYTMQLRSADEGQTVFYECLSKACKHKYAVNN 115
BLAST of mRNA_H-elongata_contig87021.16253.1 vs. uniprot
Match: A0A836CG05_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG05_9STRA) HSP 1 Score: 130 bits (327), Expect = 1.490e-37 Identity = 56/81 (69.14%), Postives = 69/81 (85.19%), Query Frame = 0
Query: 2 FGDVEVVTKSQDRPLPEWVVQLQRKGAKTELQRATVEEACPKCGHPRMEFYTMQLRSADEGQTVFYECLSKKCKHKYSLNN 82
FG VE++T+S RPLP WV +L+ KG + + +RATV+E CPKCGHP MEFYTMQLRSADEGQTVFYECL+K C+HK+S+NN
Sbjct: 35 FGKVELITQSAPRPLPRWVEELENKGIREKQKRATVDEQCPKCGHPEMEFYTMQLRSADEGQTVFYECLNKNCQHKFSVNN 115
BLAST of mRNA_H-elongata_contig87021.16253.1 vs. uniprot
Match: A0A024TQD9_9STRA (DNA-directed RNA polymerase subunit n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024TQD9_9STRA) HSP 1 Score: 105 bits (263), Expect = 1.070e-27 Identity = 50/74 (67.57%), Postives = 57/74 (77.03%), Query Frame = 0
Query: 8 VTKSQDRPLPEWVVQLQRKGAKTELQRATVEEACPKCGHPRMEFYTMQLRSADEGQTVFYECLSKKCKHKYSLN 81
+T SQDRP P+WV + + T RATVEE CPKCGHP MEFYT+QLRSADEGQTVFYEC KKC H+YS+N
Sbjct: 52 ITYSQDRPEPKWVKENVQSQEVTGPSRATVEETCPKCGHPEMEFYTLQLRSADEGQTVFYEC--KKCGHRYSVN 123
BLAST of mRNA_H-elongata_contig87021.16253.1 vs. uniprot
Match: A0A6G0WT35_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WT35_9STRA) HSP 1 Score: 104 bits (259), Expect = 4.320e-27 Identity = 52/74 (70.27%), Postives = 58/74 (78.38%), Query Frame = 0
Query: 8 VTKSQDRPLPEWVVQLQRKGAKTELQRATVEEACPKCGHPRMEFYTMQLRSADEGQTVFYECLSKKCKHKYSLN 81
VT SQDRP P+WV Q + T RATVEE CPKCG+P+MEFYTMQLRSADEGQTVFYEC KKC H+YS+N
Sbjct: 52 VTFSQDRPEPKWVKQDIQSQNVTGPARATVEETCPKCGNPQMEFYTMQLRSADEGQTVFYEC--KKCGHRYSVN 123
BLAST of mRNA_H-elongata_contig87021.16253.1 vs. uniprot
Match: A0A485LF44_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LF44_9STRA) HSP 1 Score: 102 bits (255), Expect = 1.750e-26 Identity = 50/74 (67.57%), Postives = 58/74 (78.38%), Query Frame = 0
Query: 8 VTKSQDRPLPEWVVQLQRKGAKTELQRATVEEACPKCGHPRMEFYTMQLRSADEGQTVFYECLSKKCKHKYSLN 81
VT S+DRP P+WV + + T RATVEE CPKCG+P+MEFYTMQLRSADEGQTVFYEC KKC H+YS+N
Sbjct: 52 VTFSEDRPEPKWVKEEIQSQEVTGPARATVEETCPKCGNPQMEFYTMQLRSADEGQTVFYEC--KKCGHRYSVN 123
BLAST of mRNA_H-elongata_contig87021.16253.1 vs. uniprot
Match: M4BZT8_HYAAE (DNA-directed RNA polymerase subunit n=22 Tax=Peronosporaceae TaxID=4777 RepID=M4BZT8_HYAAE) HSP 1 Score: 101 bits (251), Expect = 7.300e-26 Identity = 46/76 (60.53%), Postives = 59/76 (77.63%), Query Frame = 0
Query: 7 VVTKSQDRPLPEWVVQLQRKGAKTELQRATVEEACPKCGHPRMEFYTMQLRSADEGQTVFYECLSKKCKHKYSLNN 82
V+T+S+D+P P+W+ + T RATVEE CPKCG+P M++YT+QLRSADEGQTVFYEC KKC HK+S+NN
Sbjct: 52 VITRSEDKPTPKWLDAEKVMSEVTGPARATVEETCPKCGNPEMDYYTLQLRSADEGQTVFYEC--KKCGHKFSVNN 125
BLAST of mRNA_H-elongata_contig87021.16253.1 vs. uniprot
Match: A0A0N7L402_PLAHL (DNA-directed RNA polymerase subunit n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L402_PLAHL) HSP 1 Score: 101 bits (251), Expect = 7.300e-26 Identity = 48/78 (61.54%), Postives = 59/78 (75.64%), Query Frame = 0
Query: 5 VEVVTKSQDRPLPEWVVQLQRKGAKTELQRATVEEACPKCGHPRMEFYTMQLRSADEGQTVFYECLSKKCKHKYSLNN 82
+ VVT+S+DRPLP+W+ T RATVEE CPKC +P M++YT+QLRSADEGQTVFYEC KKC HK+S+NN
Sbjct: 50 LSVVTQSEDRPLPKWLDAKVGMSEVTGPARATVEETCPKCENPEMDYYTLQLRSADEGQTVFYEC--KKCGHKFSVNN 125
BLAST of mRNA_H-elongata_contig87021.16253.1 vs. uniprot
Match: A0A2D4BKP7_PYTIN (DNA-directed RNA polymerase subunit n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BKP7_PYTIN) HSP 1 Score: 100 bits (249), Expect = 1.350e-25 Identity = 47/78 (60.26%), Postives = 59/78 (75.64%), Query Frame = 0
Query: 5 VEVVTKSQDRPLPEWVVQLQRKGAKTELQRATVEEACPKCGHPRMEFYTMQLRSADEGQTVFYECLSKKCKHKYSLNN 82
+ VVT S+++P+P+W+ Q RATVEE CPKCG+P M++YTMQLRSADEGQTVFYEC KKC HK+S+NN
Sbjct: 47 LSVVTCSEEKPVPKWLKTEQSVNEVKGPARATVEETCPKCGNPEMDYYTMQLRSADEGQTVFYEC--KKCGHKFSVNN 122
BLAST of mRNA_H-elongata_contig87021.16253.1 vs. uniprot
Match: A0A067CLZ5_SAPPC (DNA-directed RNA polymerase subunit n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CLZ5_SAPPC) HSP 1 Score: 98.6 bits (244), Expect = 8.210e-25 Identity = 49/74 (66.22%), Postives = 55/74 (74.32%), Query Frame = 0
Query: 8 VTKSQDRPLPEWVVQLQRKGAKTELQRATVEEACPKCGHPRMEFYTMQLRSADEGQTVFYECLSKKCKHKYSLN 81
VT S+DRP P+WV T RATVEE CPKC +P+MEFYTMQLRSADEGQTVFYEC KKC H+YS+N
Sbjct: 52 VTFSEDRPEPKWVKNAIVSQEVTGPARATVEEPCPKCNNPQMEFYTMQLRSADEGQTVFYEC--KKCGHRYSVN 123
BLAST of mRNA_H-elongata_contig87021.16253.1 vs. uniprot
Match: A0A662XQG8_9STRA (DNA-directed RNA polymerase I subunit RPA12 n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XQG8_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.040e-24 Identity = 47/76 (61.84%), Postives = 59/76 (77.63%), Query Frame = 0
Query: 7 VVTKSQDRPLPEWVVQLQRKGAKTELQRATVEEACPKCGHPRMEFYTMQLRSADEGQTVFYECLSKKCKHKYSLNN 82
VVT+S+D+PLP+W+ + T RATVEE CPKC +P M++YT+QLRSADEGQTVFYEC KKC HK+S+NN
Sbjct: 173 VVTRSEDKPLPKWLDSEKVMSEVTGPARATVEETCPKCNNPEMDYYTLQLRSADEGQTVFYEC--KKCGHKFSVNN 246 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig87021.16253.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig87021.16253.1 ID=prot_H-elongata_contig87021.16253.1|Name=mRNA_H-elongata_contig87021.16253.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bpback to top |