prot_H-elongata_contig86810.16239.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig86810.16239.1
Unique Nameprot_H-elongata_contig86810.16239.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length121
Homology
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BLAST of mRNA_H-elongata_contig86810.16239.1 vs. uniprot
Match: A0A6H5KRH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRH5_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 7.730e-26
Identity = 64/120 (53.33%), Postives = 75/120 (62.50%), Query Frame = 0 
Query:    2 KVLRDNSWAEKQSAGFKEWLNFTLLGAEQLRHGAGRXXXXXXXXXXXNAETAGDCRGDDKRAHGGSSSPLKAMIDVRLEETQRIKAMRLFCSAGMVEVCDAIADKAREGTISLRRDMVLH 121
            K L D  WAEKQ+AGF  WLNFTL+GAEQLRHGAG              E  G   G      G SSSPLKAM+ +R E  QR++AMRLF S  +    +A+AD+A +GTISLRRD VLH
Sbjct:  155 KSLSDKGWAEKQTAGFTNWLNFTLVGAEQLRHGAG----------DDGEEEDG---GVTAEIGGVSSSPLKAMVAMRHEARQRVRAMRLFRSVEVRTATEAVADRAYDGTISLRRDRVLH 261
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BLAST of mRNA_H-elongata_contig86810.16239.1 vs. uniprot
Match: D8LLN9_ECTSI (Similar to asp (Abnormal spindle)-like, microcephaly associated n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLN9_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 1.970e-25
Identity = 63/120 (52.50%), Postives = 75/120 (62.50%), Query Frame = 0 
Query:    2 KVLRDNSWAEKQSAGFKEWLNFTLLGAEQLRHGAGRXXXXXXXXXXXNAETAGDCRGDDKRAHGGSSSPLKAMIDVRLEETQRIKAMRLFCSAGMVEVCDAIADKAREGTISLRRDMVLH 121
            K L D  WAEKQ+AGF  WLNFTL+GAEQLRHGAG              E  G    +     G SSSPLKAM+ +R E  QR++AMRLF S  +    +A+AD+A +GTISLRRD VLH
Sbjct:  268 KSLSDKGWAEKQTAGFTNWLNFTLVGAEQLRHGAG----------DDGEEEDGGLTAE---IGGVSSSPLKAMVAMRHEARQRMRAMRLFRSVEVRTATEAVADRAYDGTISLRRDRVLH 374
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig86810.16239.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KRH5_9PHAE7.730e-2653.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLN9_ECTSI1.970e-2552.50Similar to asp (Abnormal spindle)-like, microcepha... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig86810contigH-elongata_contig86810:1216..1768 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig86810.16239.1mRNA_H-elongata_contig86810.16239.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig86810 1216..1769 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig86810.16239.1 ID=prot_H-elongata_contig86810.16239.1|Name=mRNA_H-elongata_contig86810.16239.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=121bp
AKVLRDNSWAEKQSAGFKEWLNFTLLGAEQLRHGAGRGNGDGDTDGDGNA
ETAGDCRGDDKRAHGGSSSPLKAMIDVRLEETQRIKAMRLFCSAGMVEVC
DAIADKAREGTISLRRDMVLH
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