prot_H-elongata_contig8651.16215.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8651.16215.1
Unique Nameprot_H-elongata_contig8651.16215.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length183
Homology
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BLAST of mRNA_H-elongata_contig8651.16215.1 vs. uniprot
Match: A0A6H5KLB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLB3_9PHAE)

HSP 1 Score: 223 bits (568), Expect = 4.200e-64
Identity = 109/144 (75.69%), Postives = 117/144 (81.25%), Query Frame = 0 
Query:   40 RGSAEAVQAEPLLLWFRALCTQILHEPDPGVVALEERYNPGRDLNKVATKYKLPPVLVETLYRRHTMICRRSSTNSLDVQEWLSVVGYLIPEALGRRVFQFFAQSGGLAWTVADFITFLCVCVLDSRQEHASVMFQLFDVDRDG 183
            RG+A A QAEPLL WFR LCT+IL EP P VVALE+RYNP RDLNKV TKYKL   L + L RR   ICRRSS N+LDVQEWLS VGYL PEAL RRVFQ+FAQSGGLAWTVAD I FLC  VLDSRQEH S++FQLFDVDRDG
Sbjct:  171 RGTAAAAQAEPLLQWFRVLCTRILEEPHPAVVALEQRYNPERDLNKVVTKYKLSAGLTDVLCRRQAFICRRSSANALDVQEWLSAVGYLFPEALARRVFQYFAQSGGLAWTVADLIRFLCSWVLDSRQEHVSIIFQLFDVDRDG 314
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BLAST of mRNA_H-elongata_contig8651.16215.1 vs. uniprot
Match: D8LR49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR49_ECTSI)

HSP 1 Score: 204 bits (518), Expect = 2.220e-57
Identity = 99/136 (72.79%), Postives = 108/136 (79.41%), Query Frame = 0 
Query:   40 RGSAEAVQAEPLLLWFRALCTQILHEPDPGVVALEERYNPGRDLNKVATKYKLPPVLVETLYRRHTMICRRSSTNSLDVQEWLSVVGYLIPEALGRRVFQFFAQSGGLAWTVADFITFLCVCVLDSRQEHASVMFQ 175
            RG+A A QAEPLL WFR LCT+IL EP P VVALE+RYNP RDL+KV TKYKL   L + L RRH  ICRRSS N+LDVQEWLS VGYL PE L RRVFQ+FAQSGGLAWTVAD + FLC  VLD RQEH S+MFQ
Sbjct:  194 RGTAAAAQAEPLLQWFRVLCTRILEEPHPAVVALEQRYNPERDLSKVVTKYKLSAGLTDVLCRRHAFICRRSSANALDVQEWLSSVGYLFPETLARRVFQYFAQSGGLAWTVADLLRFLCSWVLDPRQEHVSMMFQ 329
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BLAST of mRNA_H-elongata_contig8651.16215.1 vs. uniprot
Match: A0A835YVN1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVN1_9STRA)

HSP 1 Score: 122 bits (305), Expect = 9.310e-29
Identity = 54/134 (40.30%), Postives = 82/134 (61.19%), Query Frame = 0 
Query:   50 PLLLWFRALCTQILHEPDPGVVALEERYNPGRDLNKVATKYKLPPVLVETLYRRHTMICRRSSTNSLDVQEWLSVVGYLIPEALGRRVFQFFAQSGGLAWTVADFITFLCVCVLDSRQEHASVMFQLFDVDRDG 183
            PL  WFR +C + + E DPGVVALE+RYNP R+L ++A KY++ P     L R+H  + ++     +D+  WLS+   ++   L  R F+ F++   + WTV+D++ F C  V  S  EH +++F LFD DRDG
Sbjct:  209 PLTQWFRIVCARSIEEADPGVVALEQRYNPERELARLARKYRILPAQQALLERKHMQLRQKGEAGRMDIGVWLSLAASVMHGDLAERCFRAFSRGPPMQWTVSDYVHFCCAAVRGSHHEHVTIVFNLFDDDRDG 342
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8651.16215.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KLB3_9PHAE4.200e-6475.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LR49_ECTSI2.220e-5772.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YVN1_9STRA9.310e-2940.30Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 81..183
e-value: 3.7E-8
score: 35.1
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 165..183
score: 9.157
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 83..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8651contigH-elongata_contig8651:6128..8566 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8651.16215.1mRNA_H-elongata_contig8651.16215.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8651 5798..8566 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8651.16215.1 ID=prot_H-elongata_contig8651.16215.1|Name=mRNA_H-elongata_contig8651.16215.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=183bp
MMPGGRGISRSTTCGNSSMPSMGGNTPGRSTMGWSGSFLRGSAEAVQAEP
LLLWFRALCTQILHEPDPGVVALEERYNPGRDLNKVATKYKLPPVLVETL
YRRHTMICRRSSTNSLDVQEWLSVVGYLIPEALGRRVFQFFAQSGGLAWT
VADFITFLCVCVLDSRQEHASVMFQLFDVDRDG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair