prot_H-elongata_contig86468.16210.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig86468.16210.1
Unique Name	prot_H-elongata_contig86468.16210.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	63

Homology

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BLAST of mRNA_H-elongata_contig86468.16210.1 vs. uniprot
Match: A0A6H5L0V1_9PHAE (UBC core domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0V1_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 9.340e-39
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0

Query:    1 PPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQ 62
            PPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQ
Sbjct:   64 PPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQ 125

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BLAST of mRNA_H-elongata_contig86468.16210.1 vs. uniprot
Match: A0A835ZQ60_9STRA (Ubiquitin-conjugating enzyme e2-16kda, ubiquitin protein ligase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZQ60_9STRA)

HSP 1 Score: 133 bits (335), Expect = 1.020e-38
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0

Query:    1 PPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQ 62
            PPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQ
Sbjct:   64 PPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQ 125

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BLAST of mRNA_H-elongata_contig86468.16210.1 vs. uniprot
Match: D8LQX5_ECTSI (UBC core domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQX5_ECTSI)

HSP 1 Score: 133 bits (335), Expect = 1.080e-38
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0

Query:    1 PPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQ 62
            PPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQ
Sbjct:   64 PPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQ 125

[Close]

BLAST of mRNA_H-elongata_contig86468.16210.1 vs. uniprot
Match: B8C0C0_THAPS (Ubiquitin-conjugating enzyme e2-16kda, ubiquitin protein ligase n=19 Tax=Ochrophyta TaxID=2696291 RepID=B8C0C0_THAPS)

HSP 1 Score: 130 bits (328), Expect = 1.190e-37
Identity = 60/63 (95.24%), Postives = 63/63 (100.00%), Query Frame = 0

Query:    1 PPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQV 63
            PPKV+FTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVP+IAQ+
Sbjct:   64 PPKVHFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPDIAQL 126

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BLAST of mRNA_H-elongata_contig86468.16210.1 vs. uniprot
Match: A0A7S2CNF0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CNF0_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.680e-37
Identity = 60/62 (96.77%), Postives = 62/62 (100.00%), Query Frame = 0

Query:    1 PPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQ 62
            PPKV+FTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIA+
Sbjct:   64 PPKVSFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAE 125

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BLAST of mRNA_H-elongata_contig86468.16210.1 vs. uniprot
Match: A0A6T8L654_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8L654_9STRA)

HSP 1 Score: 129 bits (325), Expect = 1.870e-37
Identity = 58/63 (92.06%), Postives = 63/63 (100.00%), Query Frame = 0

Query:    1 PPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQV 63
            PPK++FTTRIYHCNINSNGGICLDILKDQWSPALT+SKVLLSICSLLTDPNPDDPLVP+IAQ+
Sbjct:   44 PPKIHFTTRIYHCNINSNGGICLDILKDQWSPALTLSKVLLSICSLLTDPNPDDPLVPDIAQL 106

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BLAST of mRNA_H-elongata_contig86468.16210.1 vs. uniprot
Match: A0A397APW7_9STRA (UBC core domain-containing protein n=15 Tax=Stramenopiles TaxID=33634 RepID=A0A397APW7_9STRA)

HSP 1 Score: 130 bits (327), Expect = 3.710e-37
Identity = 60/63 (95.24%), Postives = 62/63 (98.41%), Query Frame = 0

Query:    1 PPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQV 63
            PPKVNFTTRIYHCNIN+NGGICLDILKDQWSPALTISKVLLSICSLLTD NPDDPLVPEIAQ+
Sbjct:   91 PPKVNFTTRIYHCNINANGGICLDILKDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAQI 153

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BLAST of mRNA_H-elongata_contig86468.16210.1 vs. uniprot
Match: M4BZ46_HYAAE (UBC core domain-containing protein n=27 Tax=Stramenopiles TaxID=33634 RepID=M4BZ46_HYAAE)

HSP 1 Score: 130 bits (327), Expect = 4.530e-37
Identity = 60/63 (95.24%), Postives = 62/63 (98.41%), Query Frame = 0

Query:    1 PPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQV 63
            PPKVNFTTRIYHCNIN+NGGICLDILKDQWSPALTISKVLLSICSLLTD NPDDPLVPEIAQ+
Sbjct:   64 PPKVNFTTRIYHCNINANGGICLDILKDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAQI 126

[Close]

BLAST of mRNA_H-elongata_contig86468.16210.1 vs. uniprot
Match: A0A7S2BUY0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BUY0_9STRA)

HSP 1 Score: 128 bits (322), Expect = 9.700e-37
Identity = 58/63 (92.06%), Postives = 62/63 (98.41%), Query Frame = 0

Query:    1 PPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQV 63
            PPKV FTT+IYHCNIN+NGGICLDILKDQWSPALT+SKVLLSICSLLTDPNPDDPLVPEIAQ+
Sbjct:   64 PPKVAFTTKIYHCNINANGGICLDILKDQWSPALTLSKVLLSICSLLTDPNPDDPLVPEIAQI 126

[Close]

BLAST of mRNA_H-elongata_contig86468.16210.1 vs. uniprot
Match: A0A6G0WK77_9STRA (UBC core domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WK77_9STRA)

HSP 1 Score: 130 bits (327), Expect = 2.020e-36
Identity = 60/63 (95.24%), Postives = 62/63 (98.41%), Query Frame = 0

Query:    1 PPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQV 63
            PPKVNFTTRIYHCNIN+NGGICLDILKDQWSPALTISKVLLSICSLLTD NPDDPLVPEIAQ+
Sbjct:   95 PPKVNFTTRIYHCNINANGGICLDILKDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAQI 157

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig86468.16210.1 vs. uniprot

BLAST of mRNA_H-elongata_contig86468.16210.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L0V1_9PHAE	9.340e-39	100.00	UBC core domain-containing protein n=1 Tax=Ectocar...	[more]
A0A835ZQ60_9STRA	1.020e-38	100.00	Ubiquitin-conjugating enzyme e2-16kda, ubiquitin p...	[more]
D8LQX5_ECTSI	1.080e-38	100.00	UBC core domain-containing protein (Fragment) n=1 ...	[more]
B8C0C0_THAPS	1.190e-37	95.24	Ubiquitin-conjugating enzyme e2-16kda, ubiquitin p...	[more]
A0A7S2CNF0_9STRA	1.680e-37	96.77	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
A0A6T8L654_9STRA	1.870e-37	92.06	Hypothetical protein n=1 Tax=Proboscia inermis Tax...	[more]
A0A397APW7_9STRA	3.710e-37	95.24	UBC core domain-containing protein n=15 Tax=Strame...	[more]
M4BZ46_HYAAE	4.530e-37	95.24	UBC core domain-containing protein n=27 Tax=Strame...	[more]
A0A7S2BUY0_9STRA	9.700e-37	92.06	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A6G0WK77_9STRA	2.020e-36	95.24	UBC core domain-containing protein n=1 Tax=Aphanom...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10		coord: 1..63 e-value: 2.4E-31 score: 110.3
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 1..62
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 1..62 e-value: 7.1E-25 score: 87.3
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBIQUITIN_CONJUGAT_2	coord: 1..63 score: 24.497
None	No IPR available	PANTHER	PTHR24068:SF276	UBIQUITIN-CONJUGATING ENZYME E2-16 KDA	coord: 1..63
None	No IPR available	PANTHER	PTHR24068	FAMILY NOT NAMED	coord: 1..63
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBIQUITIN_CONJUGAT_1	coord: 11..26

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig86468	contig	H-elongata_contig86468:435..1431 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig86468.16210.1	mRNA_H-elongata_contig86468.16210.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig86468 435..1431 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig86468.16210.1 ID=prot_H-elongata_contig86468.16210.1|Name=mRNA_H-elongata_contig86468.16210.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=63bp
PPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDP
NPDDPLVPEIAQV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016135	UBQ-conjugating_enzyme/RWD
IPR000608	UBQ-conjugat_E2
IPR023313	UBQ-conjugating_AS