prot_H-elongata_contig86447.16209.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig86447.16209.1
Unique Nameprot_H-elongata_contig86447.16209.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length119
Homology
BLAST of mRNA_H-elongata_contig86447.16209.1 vs. uniprot
Match: D7FTN4_ECTSI (DBR1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTN4_ECTSI)

HSP 1 Score: 209 bits (532), Expect = 8.020e-64
Identity = 99/118 (83.90%), Postives = 106/118 (89.83%), Query Frame = 0
Query:    1 NVLLVFRFSLSTQRQGIKVDLLICCGDFQCLRNTQDFQGLNCPDKYKKLGTFHKYYSGELVVPVLTIFIGGNHEASSYLQELHYGGWVAPKIYFMGFAGVIRVGGVRIAGLTGIYNGR 118
            N   ++RF  ST + GIKVDLLICCGDFQCLRNTQDF GL CPDKYK LGTFHKYYSGELV PVLTIFIGGNHEASSYLQELHYGGWVAP IYF+GFAGV+RVGGVRIAG+TGI+NGR
Sbjct:    6 NASFLWRFFRSTIK-GIKVDLLICCGDFQCLRNTQDFDGLACPDKYKHLGTFHKYYSGELVAPVLTIFIGGNHEASSYLQELHYGGWVAPNIYFLGFAGVVRVGGVRIAGMTGIFNGR 122          
BLAST of mRNA_H-elongata_contig86447.16209.1 vs. uniprot
Match: A0A8J5UPL3_9HYME (Uncharacterized protein n=3 Tax=Cotesia TaxID=32390 RepID=A0A8J5UPL3_9HYME)

HSP 1 Score: 163 bits (413), Expect = 7.760e-47
Identity = 74/114 (64.91%), Postives = 94/114 (82.46%), Query Frame = 0
Query:    4 LVFRFSLSTQRQ-GIKVDLLICCGDFQCLRNTQDFQGLNCPDKYKKLGTFHKYYSGELVVPVLTIFIGGNHEASSYLQELHYGGWVAPKIYFMGFAGVIRVGGVRIAGLTGIYN 116
            +++   + T++  G KVDLLICCGDFQ +RNT+D + +  PDKYK+L +FHKYYSGE   PVLTIFIGGNHEAS+YLQEL YGGWVAP IY+MG+AGV+ VGG+RIAG++GI+ 
Sbjct:   15 IIYDILMDTEKTTGKKVDLLICCGDFQSVRNTEDLKYMAVPDKYKELCSFHKYYSGEKTAPVLTIFIGGNHEASNYLQELPYGGWVAPNIYYMGYAGVLNVGGIRIAGISGIFK 128          
BLAST of mRNA_H-elongata_contig86447.16209.1 vs. uniprot
Match: A0A060XP48_ONCMY (Metallophos domain-containing protein n=1 Tax=Oncorhynchus mykiss TaxID=8022 RepID=A0A060XP48_ONCMY)

HSP 1 Score: 156 bits (394), Expect = 8.120e-47
Identity = 69/105 (65.71%), Postives = 87/105 (82.86%), Query Frame = 0
Query:   13 QRQGIKVDLLICCGDFQCLRNTQDFQGLNCPDKYKKLGTFHKYYSGELVVPVLTIFIGGNHEASSYLQELHYGGWVAPKIYFMGFAGVIRVGGVRIAGLTGIYNG 117
            Q++G+KVDLL+CCGDFQ +RN  D + +  P KY+++ TF+KYYSGE   PVLTIFIGGNHEAS++LQEL YGGWVAP IY+MG+AGV+R  GVRI GL+GI+ G
Sbjct:   25 QKEGVKVDLLLCCGDFQAVRNEGDMKCMAVPQKYRQMQTFYKYYSGEKKAPVLTIFIGGNHEASNHLQELPYGGWVAPNIYYMGYAGVVRYKGVRIGGLSGIFKG 129          
BLAST of mRNA_H-elongata_contig86447.16209.1 vs. uniprot
Match: UPI0007638A51 (lariat debranching enzyme-like n=1 Tax=Diuraphis noxia TaxID=143948 RepID=UPI0007638A51)

HSP 1 Score: 160 bits (405), Expect = 9.580e-47
Identity = 73/107 (68.22%), Postives = 86/107 (80.37%), Query Frame = 0
Query:   10 LSTQRQGIKVDLLICCGDFQCLRNTQDFQGLNCPDKYKKLGTFHKYYSGELVVPVLTIFIGGNHEASSYLQELHYGGWVAPKIYFMGFAGVIRVGGVRIAGLTGIYN 116
            L  +R  IKVDLLICCGDFQ  RNT+D   +  P KY+++ +FHKYYSGELV P+LTIFIGGNHEAS++LQEL YGGW AP IY+MG AGVI VGG+RI GL+GIY 
Sbjct:   22 LIEKRDNIKVDLLICCGDFQATRNTEDLLAMAVPLKYRQMCSFHKYYSGELVXPILTIFIGGNHEASNHLQELSYGGWAAPNIYYMGLAGVINVGGIRIGGLSGIYK 128          
BLAST of mRNA_H-elongata_contig86447.16209.1 vs. uniprot
Match: A0A6L2Q6U8_COPFO (Uncharacterized protein (Fragment) n=1 Tax=Coptotermes formosanus TaxID=36987 RepID=A0A6L2Q6U8_COPFO)

HSP 1 Score: 160 bits (404), Expect = 9.770e-47
Identity = 71/105 (67.62%), Postives = 87/105 (82.86%), Query Frame = 0
Query:   13 QRQGIKVDLLICCGDFQCLRNTQDFQGLNCPDKYKKLGTFHKYYSGELVVPVLTIFIGGNHEASSYLQELHYGGWVAPKIYFMGFAGVIRVGGVRIAGLTGIYNG 117
            ++ GIKVDLLICCGDFQ  RN +D + +  P KY+K+ TF+KYYSGE + PVLTIFIGGNHEAS+YLQEL YGGWVAP+IY+MG+A V+ V GVR+ GL+GIY G
Sbjct:   25 KKDGIKVDLLICCGDFQATRNKEDLKCMAVPQKYQKMCTFYKYYSGEKLAPVLTIFIGGNHEASNYLQELPYGGWVAPRIYYMGYASVVNVAGVRVGGLSGIYKG 129          
BLAST of mRNA_H-elongata_contig86447.16209.1 vs. uniprot
Match: UPI001AEB4834 (LOW QUALITY PROTEIN: lariat debranching enzyme-like n=1 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=UPI001AEB4834)

HSP 1 Score: 164 bits (416), Expect = 3.110e-46
Identity = 73/104 (70.19%), Postives = 87/104 (83.65%), Query Frame = 0
Query:   13 QRQGIKVDLLICCGDFQCLRNTQDFQGLNCPDKYKKLGTFHKYYSGELVVPVLTIFIGGNHEASSYLQELHYGGWVAPKIYFMGFAGVIRVGGVRIAGLTGIYN 116
            +R   KVDLL+CCGDFQ +RN +D + + CPDKYK  G+F+KYYSGELV P+LTIFIGGNHEAS+YLQEL YGGWVAPKIYF+G A VI VGG+RI G++GIY 
Sbjct:   25 KRHKYKVDLLLCCGDFQSVRNLEDLKTMACPDKYKSAGSFYKYYSGELVAPILTIFIGGNHEASNYLQELPYGGWVAPKIYFLGKASVINVGGIRIGGISGIYK 128          
BLAST of mRNA_H-elongata_contig86447.16209.1 vs. uniprot
Match: A0A836CF65_9STRA (Putative RNA lariat debranching enzyme n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF65_9STRA)

HSP 1 Score: 161 bits (408), Expect = 3.860e-46
Identity = 72/103 (69.90%), Postives = 84/103 (81.55%), Query Frame = 0
Query:   16 GIKVDLLICCGDFQCLRNTQDFQGLNCPDKYKKLGTFHKYYSGELVVPVLTIFIGGNHEASSYLQELHYGGWVAPKIYFMGFAGVIRVGGVRIAGLTGIYNGR 118
             IKVDLL+CCGDFQ LR+  DF+G+  P  ++ L +FH YY G  V PVLTIFIGGNHEAS+YLQELHYGGWVAP IYF+GF+GV+ VGG+RI GLTGIYN R
Sbjct:   29 SIKVDLLLCCGDFQSLRDAGDFEGMAVPAHHRHLASFHDYYHGRKVAPVLTIFIGGNHEASNYLQELHYGGWVAPNIYFLGFSGVVNVGGIRIGGLTGIYNHR 131          
BLAST of mRNA_H-elongata_contig86447.16209.1 vs. uniprot
Match: A0A8D8LCZ1_9HEMI (Lariat debranching enzyme n=1 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D8LCZ1_9HEMI)

HSP 1 Score: 155 bits (393), Expect = 4.080e-46
Identity = 68/109 (62.39%), Postives = 86/109 (78.90%), Query Frame = 0
Query:    9 SLSTQRQGIKVDLLICCGDFQCLRNTQDFQGLNCPDKYKKLGTFHKYYSGELVVPVLTIFIGGNHEASSYLQELHYGGWVAPKIYFMGFAGVIRVGGVRIAGLTGIYNG 117
            +L  QR+  KVDLLICCGDFQ  RN +D   + CP KY+ + +F+KYYSGE   P+LTIFIGGNHEASSYLQEL YGGWVAP I+++G+AGV+ +GG+RI G++GI  G
Sbjct:   21 ALIEQRENFKVDLLICCGDFQSTRNAEDLACMACPPKYRDMCSFYKYYSGEKQAPILTIFIGGNHEASSYLQELSYGGWVAPNIFYLGYAGVVNIGGLRIGGISGIQKG 129          
BLAST of mRNA_H-elongata_contig86447.16209.1 vs. uniprot
Match: A0A7J9LR96_GOSSC (Metallophos domain-containing protein n=5 Tax=Gossypium TaxID=3633 RepID=A0A7J9LR96_GOSSC)

HSP 1 Score: 154 bits (389), Expect = 4.540e-46
Identity = 67/104 (64.42%), Postives = 84/104 (80.77%), Query Frame = 0
Query:   15 QGIKVDLLICCGDFQCLRNTQDFQGLNCPDKYKKLGTFHKYYSGELVVPVLTIFIGGNHEASSYLQELHYGGWVAPKIYFMGFAGVIRVGGVRIAGLTGIYNGR 118
            + IK+DLL+CCGDFQ +RN +D   LN P KY+++ +F KYYSG+ V PV TIFIGGNHEAS+YL EL+YGGW AP IYF+GFAGV++ G +RI GL+GIYN R
Sbjct:   27 RNIKIDLLLCCGDFQAVRNEKDMDSLNVPPKYREMKSFWKYYSGQEVAPVPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNAR 130          
BLAST of mRNA_H-elongata_contig86447.16209.1 vs. uniprot
Match: A0A0K9NIB8_ZOSMR (Lariat debranching enzyme n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9NIB8_ZOSMR)

HSP 1 Score: 162 bits (410), Expect = 4.810e-46
Identity = 67/104 (64.42%), Postives = 86/104 (82.69%), Query Frame = 0
Query:   13 QRQGIKVDLLICCGDFQCLRNTQDFQGLNCPDKYKKLGTFHKYYSGELVVPVLTIFIGGNHEASSYLQELHYGGWVAPKIYFMGFAGVIRVGGVRIAGLTGIYN 116
            +R+ +K+DLLICCGDFQ +RN +D + LNCP  Y+K+ +FHKYYSG+L+ P  TIFIGGNHEAS+YL EL+YGGW AP IYF+GFAG+I+ G +RI GL+GIY 
Sbjct:   25 RRENVKIDLLICCGDFQSVRNEEDLKSLNCPPNYRKMNSFHKYYSGDLIAPFPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGIIKFGNIRIGGLSGIYK 128          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig86447.16209.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTN4_ECTSI8.020e-6483.90DBR1 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A8J5UPL3_9HYME7.760e-4764.91Uncharacterized protein n=3 Tax=Cotesia TaxID=3239... [more]
A0A060XP48_ONCMY8.120e-4765.71Metallophos domain-containing protein n=1 Tax=Onco... [more]
UPI0007638A519.580e-4768.22lariat debranching enzyme-like n=1 Tax=Diuraphis n... [more]
A0A6L2Q6U8_COPFO9.770e-4767.62Uncharacterized protein (Fragment) n=1 Tax=Coptote... [more]
UPI001AEB48343.110e-4670.19LOW QUALITY PROTEIN: lariat debranching enzyme-lik... [more]
A0A836CF65_9STRA3.860e-4669.90Putative RNA lariat debranching enzyme n=1 Tax=Tri... [more]
A0A8D8LCZ1_9HEMI4.080e-4662.39Lariat debranching enzyme n=1 Tax=Cacopsylla melan... [more]
A0A7J9LR96_GOSSC4.540e-4664.42Metallophos domain-containing protein n=5 Tax=Goss... [more]
A0A0K9NIB8_ZOSMR4.810e-4664.42Lariat debranching enzyme n=1 Tax=Zostera marina T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12849RNA LARIAT DEBRANCHING ENZYMEcoord: 12..118
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..54
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 73..91
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 116..118
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..72
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 92..115
NoneNo IPR availableSUPERFAMILY56300Metallo-dependent phosphatasescoord: 17..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig86447contigH-elongata_contig86447:780..2543 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig86447.16209.1mRNA_H-elongata_contig86447.16209.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig86447 780..2543 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig86447.16209.1 ID=prot_H-elongata_contig86447.16209.1|Name=mRNA_H-elongata_contig86447.16209.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=119bp
NVLLVFRFSLSTQRQGIKVDLLICCGDFQCLRNTQDFQGLNCPDKYKKLG
TFHKYYSGELVVPVLTIFIGGNHEASSYLQELHYGGWVAPKIYFMGFAGV
IRVGGVRIAGLTGIYNGR*
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