prot_H-elongata_contig86270.16200.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig86270.16200.1
Unique Nameprot_H-elongata_contig86270.16200.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length58
Homology
BLAST of mRNA_H-elongata_contig86270.16200.1 vs. uniprot
Match: D7G2Q6_ECTSI (V-type proton ATPase subunit C n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2Q6_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 1.060e-28
Identity = 52/58 (89.66%), Postives = 56/58 (96.55%), Query Frame = 0
Query:    1 MHAGMIRWCRAHFGEAFSAWMHVKLIKSYCESVMRYGLPVDFSAFMLAPKKGQEAKVR 58
            +HAGMIRWCRAHFGEAFSAWMHVKL+KSY ESVMRYGLPVDFSAF+LA KKGQEAKV+
Sbjct:  334 LHAGMIRWCRAHFGEAFSAWMHVKLVKSYVESVMRYGLPVDFSAFVLATKKGQEAKVK 391          
BLAST of mRNA_H-elongata_contig86270.16200.1 vs. uniprot
Match: A0A835Z1N8_9STRA (V-type proton ATPase subunit C n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1N8_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 4.300e-19
Identity = 37/57 (64.91%), Postives = 47/57 (82.46%), Query Frame = 0
Query:    1 MHAGMIRWCRAHFGEAFSAWMHVKLIKSYCESVMRYGLPVDFSAFMLAPKKGQEAKV 57
            +HAGM+RWC+AHFGEA  AWMH+KLI+ + ESV+RYGLPVDFS  ++   KG+EA V
Sbjct:  343 LHAGMLRWCKAHFGEAMIAWMHIKLIRGFVESVLRYGLPVDFSTLLVECAKGKEAAV 399          
BLAST of mRNA_H-elongata_contig86270.16200.1 vs. uniprot
Match: A0A8K1CMT2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMT2_PYTOL)

HSP 1 Score: 84.3 bits (207), Expect = 9.460e-18
Identity = 34/56 (60.71%), Postives = 46/56 (82.14%), Query Frame = 0
Query:    3 AGMIRWCRAHFGEAFSAWMHVKLIKSYCESVMRYGLPVDFSAFMLAPKKGQEAKVR 58
            +G+IRWC+AHFGE F AWMH+K+I+++ ESV+RYGLPV+F   M  P KG+E K+R
Sbjct:  316 SGLIRWCKAHFGETFIAWMHIKMIRTFVESVLRYGLPVNFVVVMYRPHKGKEKKLR 371          
BLAST of mRNA_H-elongata_contig86270.16200.1 vs. uniprot
Match: A0A397CBR0_9STRA (V-type proton ATPase subunit C n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CBR0_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.080e-17
Identity = 32/58 (55.17%), Postives = 47/58 (81.03%), Query Frame = 0
Query:    1 MHAGMIRWCRAHFGEAFSAWMHVKLIKSYCESVMRYGLPVDFSAFMLAPKKGQEAKVR 58
            +++G++RWC+AHFGE F AWMHVK ++ + ESV+RYGLPV+F A +  PK G++ K+R
Sbjct:  204 LYSGLLRWCKAHFGETFIAWMHVKAVRVFVESVLRYGLPVNFVAMLFKPKAGRDKKLR 261          
BLAST of mRNA_H-elongata_contig86270.16200.1 vs. uniprot
Match: W4H5I3_9STRA (V-type proton ATPase subunit C n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H5I3_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 4.630e-17
Identity = 32/58 (55.17%), Postives = 47/58 (81.03%), Query Frame = 0
Query:    1 MHAGMIRWCRAHFGEAFSAWMHVKLIKSYCESVMRYGLPVDFSAFMLAPKKGQEAKVR 58
            +++G++RWC+AHFGE F AWMHVK ++ + ESV+RYGLPV+F A +  PK G++ K+R
Sbjct:  314 LYSGLLRWCKAHFGETFIAWMHVKAVRVFVESVLRYGLPVNFVAMLFKPKAGRDKKLR 371          
BLAST of mRNA_H-elongata_contig86270.16200.1 vs. uniprot
Match: A0A485LS38_9STRA (V-type proton ATPase subunit C n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LS38_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 4.630e-17
Identity = 33/58 (56.90%), Postives = 46/58 (79.31%), Query Frame = 0
Query:    1 MHAGMIRWCRAHFGEAFSAWMHVKLIKSYCESVMRYGLPVDFSAFMLAPKKGQEAKVR 58
            ++ G++RWC+AHFGE F AWMHVK I+ + ESV+RYGLPV+F A +  PK G+E ++R
Sbjct:  314 LYTGLLRWCKAHFGETFIAWMHVKAIRVFVESVLRYGLPVNFVALLYKPKSGKEKRLR 371          
BLAST of mRNA_H-elongata_contig86270.16200.1 vs. uniprot
Match: A0A7S1BQE7_9STRA (V-type proton ATPase subunit C (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BQE7_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.030e-16
Identity = 33/54 (61.11%), Postives = 43/54 (79.63%), Query Frame = 0
Query:    1 MHAGMIRWCRAHFGEAFSAWMHVKLIKSYCESVMRYGLPVDFSAFMLAPKKGQE 54
            M  G+ RWCR H+GEAF AWMH+K+I+ + ESV+RYGLPVDF+A +   KKG+E
Sbjct:  244 MKTGLTRWCRTHYGEAFVAWMHIKVIRVFVESVLRYGLPVDFTAVLYMTKKGKE 297          
BLAST of mRNA_H-elongata_contig86270.16200.1 vs. uniprot
Match: A0A6G0WZK4_9STRA (V-type proton ATPase subunit C n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WZK4_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 1.210e-16
Identity = 32/58 (55.17%), Postives = 46/58 (79.31%), Query Frame = 0
Query:    1 MHAGMIRWCRAHFGEAFSAWMHVKLIKSYCESVMRYGLPVDFSAFMLAPKKGQEAKVR 58
            ++ G++RWC+AHFGE F AWMHVK ++ + ESV+RYGLPV+F A +  PK G++ K+R
Sbjct:  314 LYTGLLRWCKAHFGETFIAWMHVKAVRVFVESVLRYGLPVNFVAVLYKPKAGKDKKLR 371          
BLAST of mRNA_H-elongata_contig86270.16200.1 vs. uniprot
Match: K0TLZ5_THAOC (V-type proton ATPase subunit C (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TLZ5_THAOC)

HSP 1 Score: 79.3 bits (194), Expect = 1.490e-16
Identity = 33/57 (57.89%), Postives = 45/57 (78.95%), Query Frame = 0
Query:    1 MHAGMIRWCRAHFGEAFSAWMHVKLIKSYCESVMRYGLPVDFSAFMLAPKKGQEAKV 57
            M +G+ RWC+ H+GEAF AWMHVK+I+ + ESV+RYGLPVDF+A +     G+EAK+
Sbjct:  159 MRSGLTRWCKTHYGEAFVAWMHVKVIRVFVESVLRYGLPVDFTAVLYKVGSGKEAKL 215          
BLAST of mRNA_H-elongata_contig86270.16200.1 vs. uniprot
Match: A0A7S1FWB8_9STRA (V-type proton ATPase subunit C (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FWB8_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 2.070e-16
Identity = 33/54 (61.11%), Postives = 43/54 (79.63%), Query Frame = 0
Query:    1 MHAGMIRWCRAHFGEAFSAWMHVKLIKSYCESVMRYGLPVDFSAFMLAPKKGQE 54
            M  G+ RWCR H+GEAF AWMH+K+I+ + ESV+RYGLPVDF+A +   KKG+E
Sbjct:  335 MKTGLTRWCRTHYGEAFVAWMHIKVIRVFVESVLRYGLPVDFTAVLYMTKKGKE 388          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig86270.16200.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2Q6_ECTSI1.060e-2889.66V-type proton ATPase subunit C n=2 Tax=Ectocarpus ... [more]
A0A835Z1N8_9STRA4.300e-1964.91V-type proton ATPase subunit C n=1 Tax=Tribonema m... [more]
A0A8K1CMT2_PYTOL9.460e-1860.71Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A397CBR0_9STRA2.080e-1755.17V-type proton ATPase subunit C n=6 Tax=Aphanomyces... [more]
W4H5I3_9STRA4.630e-1755.17V-type proton ATPase subunit C n=2 Tax=Aphanomyces... [more]
A0A485LS38_9STRA4.630e-1756.90V-type proton ATPase subunit C n=1 Tax=Aphanomyces... [more]
A0A7S1BQE7_9STRA1.030e-1661.11V-type proton ATPase subunit C (Fragment) n=1 Tax=... [more]
A0A6G0WZK4_9STRA1.210e-1655.17V-type proton ATPase subunit C n=1 Tax=Aphanomyces... [more]
K0TLZ5_THAOC1.490e-1657.89V-type proton ATPase subunit C (Fragment) n=1 Tax=... [more]
A0A7S1FWB8_9STRA2.070e-1661.11V-type proton ATPase subunit C (Fragment) n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1460.10coord: 1..39
e-value: 1.4E-13
score: 53.6
IPR004907ATPase, V1 complex, subunit CPFAMPF03223V-ATPase_Ccoord: 4..58
e-value: 1.8E-19
score: 70.4
IPR004907ATPase, V1 complex, subunit CPANTHERPTHR10137V-TYPE PROTON ATPASE SUBUNIT Ccoord: 5..58
IPR036132Vacuolar ATP synthase subunit C superfamilySUPERFAMILY118203Vacuolar ATP synthase subunit Ccoord: 4..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig86270contigH-elongata_contig86270:118..291 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig86270.16200.1mRNA_H-elongata_contig86270.16200.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig86270 94..291 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig86270.16200.1 ID=prot_H-elongata_contig86270.16200.1|Name=mRNA_H-elongata_contig86270.16200.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=58bp
MHAGMIRWCRAHFGEAFSAWMHVKLIKSYCESVMRYGLPVDFSAFMLAPK
KGQEAKVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004907ATPase_V1-cplx_csu
IPR036132Vac_ATP_synth_c_sf