prot_H-elongata_contig86144.16191.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig86144.16191.1
Unique Nameprot_H-elongata_contig86144.16191.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length210
Homology
BLAST of mRNA_H-elongata_contig86144.16191.1 vs. uniprot
Match: A0A6H5JTK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK6_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 1.570e-50
Identity = 87/207 (42.03%), Postives = 133/207 (64.25%), Query Frame = 0
Query:    5 PSREIVGALMWAATMTRPDISFTAHQLAKFNDNPGPTHWRASRKALQYLWRTRDVGITYGGEPGGGGKLSAWIDADYGTCPDTRRSVSGGVVMMADGAISWFSRVQKVTAAASSESEYIALAEMVNELRFLRQVKEFMTPPIDA-AIKIHEDNEDAIKMAKNRFSSHRTRHVDIKHHIVRDAIDGGVVHIEYVRSGEQHADILTKSV 210
            P RE++G+LMW AT TRPDI+     +A++  +P   HWRA    L Y+ RT D+GIT+      G  +  + DADY +    RRSVSGG+VM   G +SWFSR QK    +++E+EY++LA+++ E+ FLRQV+ F+ P      I + EDN+ AI++A+N  S+  ++H+D++HH +R+ +    + I +V S  QHAD LTK++
Sbjct:   32 PFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCMSWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVRRFVLPEAGMPCIPVLEDNQGAIQLAQNPISNSTSKHIDVRHHFIRELVRRKEISIFHVESAYQHADFLTKAL 238          
BLAST of mRNA_H-elongata_contig86144.16191.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 2.050e-50
Identity = 89/207 (43.00%), Postives = 133/207 (64.25%), Query Frame = 0
Query:    5 PSREIVGALMWAATMTRPDISFTAHQLAKFNDNPGPTHWRASRKALQYLWRTRDVGITYGGEPGGGGKLSAWIDADYGTCPDTRRSVSGGVVMMADGAISWFSRVQKVTAAASSESEYIALAEMVNELRFLRQVKEFMTPPIDA-AIKIHEDNEDAIKMAKNRFSSHRTRHVDIKHHIVRDAIDGGVVHIEYVRSGEQHADILTKSV 210
            P RE++G+LMW AT TRPDI+     +A++  +P   HWRA    L Y+ RT D+GIT+      G  +  ++DADY +    RRSVSGG+VM   G ISWFSR QK    +++E+EY++LA+++ E+ FLRQV  FM P      I + EDN+ AI++A+N  S+  ++H+D++HH +R+ +    + I +V S  QHAD LTK++
Sbjct:  216 PFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKAL 422          
BLAST of mRNA_H-elongata_contig86144.16191.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 4.290e-49
Identity = 89/207 (43.00%), Postives = 133/207 (64.25%), Query Frame = 0
Query:    5 PSREIVGALMWAATMTRPDISFTAHQLAKFNDNPGPTHWRASRKALQYLWRTRDVGITYGGEPGGGGKLSAWIDADYGTCPDTRRSVSGGVVMMADGAISWFSRVQKVTAAASSESEYIALAEMVNELRFLRQVKEFMTPPIDA-AIKIHEDNEDAIKMAKNRFSSHRTRHVDIKHHIVRDAIDGGVVHIEYVRSGEQHADILTKSV 210
            P RE++G+LMW AT TRPDI+     +A++  +P   HWRA    L Y+ RT D+GIT+      G  +  ++DADY +    RRSVSGG+VM   G ISWFSR QK    +++E+EY++LA+++ E+ FLRQV  FM P      I + EDN+ AI++A+N  S+  ++H+D++HH +R+ +    + I +V S  QHAD LTK++
Sbjct:  390 PFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKAL 596          
BLAST of mRNA_H-elongata_contig86144.16191.1 vs. uniprot
Match: A0A6H5KR24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR24_9PHAE)

HSP 1 Score: 171 bits (432), Expect = 1.040e-48
Identity = 89/208 (42.79%), Postives = 131/208 (62.98%), Query Frame = 0
Query:    5 PSREIVGALMWAATMTRPDISFTAHQLAKFNDNPGPTHWRASRKALQYLWRTRDVGITYGGEPGGGGKLSAWIDADYGTCPDTRRSVSGGVVMMADGAISWFSRVQKVTAAASSESEYIALAEMVNELRFLRQVKEFMTPPIDA-AIKIHEDNEDAIKMAKNRFSSHRTRHVDIKHHIVRDAIDGGV-VHIEYVRSGEQHADILTKSV 210
            P RE++G+LMW AT TRPDI+     +A++  +P   HWRA    L Y+ RT D GIT+      G  +  + DADY +    RRSVSGG+VM   G ISWFSR QK    +++E+EY++LA+++ E+ FLRQV  FM P      I + EDN+ AI++A+N  S+   +H+D++HH +R+ + G   + I +V S  QHAD LT+++
Sbjct:  115 PFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDSGITFRRGSIAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNLKHIDVRHHFIRELVVGRKEISIFHVESAYQHADFLTRAL 322          
BLAST of mRNA_H-elongata_contig86144.16191.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 3.450e-48
Identity = 84/208 (40.38%), Postives = 133/208 (63.94%), Query Frame = 0
Query:    4 IPSREIVGALMWAATMTRPDISFTAHQLAKFNDNPGPTHWRASRKALQYLWRTRDVGITYGGEPGGGGKLSAWIDADYGTCPDTRRSVSGGVVMMADGAISWFSRVQKVTAAASSESEYIALAEMVNELRFLRQVKEFMTPPIDA-AIKIHEDNEDAIKMAKNRFSSHRTRHVDIKHHIVRDAIDGGVVHIEYVRSGEQHADILTKSV 210
            +P RE+VG+LMW AT TRPDI+     +A++  +P   HW+A+   L Y+ RT  +GIT+      G  +  ++DADY +    RRSVSGG+VM   G ++WFSR QK    +++E+EY+A+A+++ E+ FLRQV  FM P      I + EDN+ AI++A N  ++  ++H+D++HH +R+ ++   + I  V +  QHAD LTK++
Sbjct:   98 VPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITNVPTPFQHADFLTKAI 305          
BLAST of mRNA_H-elongata_contig86144.16191.1 vs. uniprot
Match: A0A6H5JRZ9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRZ9_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 4.550e-48
Identity = 88/207 (42.51%), Postives = 134/207 (64.73%), Query Frame = 0
Query:    5 PSREIVGALMWAATMTRPDISFTAHQLAKFNDNPGPTHWRASRKALQYLWRTRDVGITYGGEPGGGGKLSAWIDADYGTCPDTRRSVSGGVVMMADGAISWFSRVQKVTAAASSESEYIALAEMVNELRFLRQVKEFMTPP-IDAAIKIHEDNEDAIKMAKNRFSSHRTRHVDIKHHIVRDAIDGGVVHIEYVRSGEQHADILTKSV 210
            P R +VG+L+W A +TRPDI+ +   +A+++  P   HW+A+   L Y  RT   GI++      G  L  +++ADY +    RRSVSGGVVM A GAI+WFS+ QK    +++++EY+A+A+M  E+ FLRQV  FM P  +   I ++EDNE AI++AK+  S+  ++H+D++HH +R  +D   V I +V S  QHAD LTK++
Sbjct:  214 PFRALVGSLLWIALLTRPDIANSVRAVARYSGAPKLIHWKAALSILGYAVRTSSFGISFQSGTVSGFSLITFVNADYASRAADRRSVSGGVVMCAGGAIAWFSKTQKCVTLSTTQAEYVAMADMGKEILFLRQVWRFMLPKELRPCIPLYEDNEGAIQIAKHPISNSNSKHIDVRHHFLRQLVDEKEVEIIHVASQYQHADFLTKAL 420          
BLAST of mRNA_H-elongata_contig86144.16191.1 vs. uniprot
Match: A0A6H5JWK8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWK8_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 5.720e-48
Identity = 88/209 (42.11%), Postives = 132/209 (63.16%), Query Frame = 0
Query:    3 QIPSREIVGALMWAATMTRPDISFTAHQLAKFNDNPGPTHWRASRKALQYLWRTRDVGITYGGEPGGGGKLSAWIDADYGTCPDTRRSVSGGVVMMADGAISWFSRVQKVTAAASSESEYIALAEMVNELRFLRQVKEFMTPP-IDAAIKIHEDNEDAIKMAKNRFSSHRTRHVDIKHHIVRDAIDGGVVHIEYVRSGEQHADILTKSV 210
            + P R ++G+L+W A +TRPDI+     +A++   P   HWRA+   L Y  RT   GI++      G  L  + DADY +    RRSVSGGVVM A GAI+WFS+ QK    +++++EY+A+A+M  E+ FLR+V  FM P  +   I ++EDNE AI++AK+  S+  ++H+D++HH +R  +D   V I +V S  QHAD LTK++
Sbjct:  160 EYPFRALIGSLLWVALLTRPDIANAVRAVARYCSEPKLIHWRAALGILGYAVRTSSFGISFQRGTVSGFSLITFADADYASRAADRRSVSGGVVMCAGGAIAWFSKTQKCVTLSTTQAEYVAMADMGKEILFLREVWRFMLPKELRPCIPLYEDNEGAIQIAKHPISNSNSKHIDVRHHFLRQLVDEKEVEIIHVASQYQHADFLTKAL 368          
BLAST of mRNA_H-elongata_contig86144.16191.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE)

HSP 1 Score: 171 bits (432), Expect = 1.320e-47
Identity = 84/208 (40.38%), Postives = 134/208 (64.42%), Query Frame = 0
Query:    4 IPSREIVGALMWAATMTRPDISFTAHQLAKFNDNPGPTHWRASRKALQYLWRTRDVGITYGGEPGGGGKLSAWIDADYGTCPDTRRSVSGGVVMMADGAISWFSRVQKVTAAASSESEYIALAEMVNELRFLRQVKEFMTPPIDA-AIKIHEDNEDAIKMAKNRFSSHRTRHVDIKHHIVRDAIDGGVVHIEYVRSGEQHADILTKSV 210
            +P RE+VG+LMW AT TRPDI+     +A++  +P   HW+A+   L Y+ RT  +GIT+      G  +  ++DADY +    RRSVSGG+VM   G ++WFSR QK    +++E+EY+A+A+++ E+ FLRQV  FM P      I + EDN+ AI++A N  ++  ++H+D++HH +R+ ++   + I +V +  QHAD LTK++
Sbjct:  215 VPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTHFQHADFLTKAI 422          
BLAST of mRNA_H-elongata_contig86144.16191.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 1.330e-47
Identity = 83/208 (39.90%), Postives = 133/208 (63.94%), Query Frame = 0
Query:    4 IPSREIVGALMWAATMTRPDISFTAHQLAKFNDNPGPTHWRASRKALQYLWRTRDVGITYGGEPGGGGKLSAWIDADYGTCPDTRRSVSGGVVMMADGAISWFSRVQKVTAAASSESEYIALAEMVNELRFLRQVKEFMTPPIDA-AIKIHEDNEDAIKMAKNRFSSHRTRHVDIKHHIVRDAIDGGVVHIEYVRSGEQHADILTKSV 210
            +P RE+VG+LMW AT TRPDI+     +A++  +P   HW+A+   L Y+ RT  +GIT+      G  +  ++DADY +    RRSVSGG+VM   G ++WFSR QK    +++E+EY+A+A+++ E+ FLRQV  FM P      I + EDN+ AI++  N  ++  ++H+D++HH +R+ ++   + I +V +  QHAD LTK++
Sbjct:  153 VPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMPCIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTKAI 360          
BLAST of mRNA_H-elongata_contig86144.16191.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE)

HSP 1 Score: 176 bits (447), Expect = 1.970e-47
Identity = 88/207 (42.51%), Postives = 133/207 (64.25%), Query Frame = 0
Query:    5 PSREIVGALMWAATMTRPDISFTAHQLAKFNDNPGPTHWRASRKALQYLWRTRDVGITYGGEPGGGGKLSAWIDADYGTCPDTRRSVSGGVVMMADGAISWFSRVQKVTAAASSESEYIALAEMVNELRFLRQVKEFMTPPIDA-AIKIHEDNEDAIKMAKNRFSSHRTRHVDIKHHIVRDAIDGGVVHIEYVRSGEQHADILTKSV 210
            P RE++G+LMW AT TRPDI+     +A++  +P   HWRA    L Y+ RT D+GIT+      G  +  ++DADY +    RRSVSGG+VM   G ISWFSR QK    +++E+EY++LA+++ E+ FLRQV  FM P      I + EDN+ AI++A+N  S+  ++H+D++HH +R+ +    + I +V S  QHA+ LTK++
Sbjct:  911 PFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHAEFLTKAL 1117          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig86144.16191.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JTK6_9PHAE1.570e-5042.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLN0_9PHAE2.050e-5043.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KQB8_9PHAE4.290e-4943.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KR24_9PHAE1.040e-4842.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KP70_9PHAE3.450e-4840.38Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRZ9_9PHAE4.550e-4842.51Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JWK8_9PHAE5.720e-4842.11Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JEF2_9PHAE1.320e-4740.38Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L4G9_9PHAE1.330e-4739.90Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K2R1_9PHAE1.970e-4742.51Integrase catalytic domain-containing protein n=3 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 7..186
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 7..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig86144contigH-elongata_contig86144:183..812 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig86144.16191.1mRNA_H-elongata_contig86144.16191.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig86144 183..1574 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig86144.16191.1 ID=prot_H-elongata_contig86144.16191.1|Name=mRNA_H-elongata_contig86144.16191.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=210bp
MRQIPSREIVGALMWAATMTRPDISFTAHQLAKFNDNPGPTHWRASRKAL
QYLWRTRDVGITYGGEPGGGGKLSAWIDADYGTCPDTRRSVSGGVVMMAD
GAISWFSRVQKVTAAASSESEYIALAEMVNELRFLRQVKEFMTPPIDAAI
KIHEDNEDAIKMAKNRFSSHRTRHVDIKHHIVRDAIDGGVVHIEYVRSGE
QHADILTKSV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like