prot_H-elongata_contig85998.16180.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig85998.16180.1
Unique Nameprot_H-elongata_contig85998.16180.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length461
Homology
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BLAST of mRNA_H-elongata_contig85998.16180.1 vs. uniprot
Match: A0A6H5JDI9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDI9_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 1.210e-57
Identity = 157/397 (39.55%), Postives = 170/397 (42.82%), Query Frame = 0 
Query:   98 NRTGCGGRYASWDALVKPFKQQWDHIEPPPEELAAAEAWQGTSNGIG-----------------------IGEVLCSRFSPRPQPGDTTMFSVEQCSARAHPTAVASYVLRVRCGSGAHIVRRTWDDLVTLCTMLGTSTPTPPRSDVAPRGVSDIEMGIRGGGAGEEGSRSLTTAVAGSGTTTTTPPIGLEFAPPDVLGREAASGFLRDLLERTGMVWATPTRCFLELEYLDGTLRGGPADDRRERVSRQVASVAASXXXXXXATAVKIPITLLSGTLTETQRQQAARAGGVKNAFQGVPAPAPVPCLTVGAPPKTWLG-------------------------------APRPALSLMAPHPDAARDLAAVWRCLGELGADTFSSMPFPRTWAATP 440
            N  G GG YASWD LVKP KQQWDHIE P     +AEA  G   G G                           +CS FS +P P  T  FSVEQCSA+AHP AVASYVLRVRC  GAHIVRRTWDD+V LCTML          DV  R                                       +EF P DVL  +AASGFL+DLL R GM WATP R FLELEYLDGTLRGG ADD R   +RQVAS+AA        TA             +                                                                       PRPA +L A HPDAARDLAAV RCLGELGA  F+S       AA P
Sbjct:  323 NSGGLGGGYASWDVLVKPLKQQWDHIEGP-----SAEARGGRRGGAGPKPSAYSAXXXXXXXXXXXXXXXXXXXVCSVFSAQPCPNSTAAFSVEQCSAQAHPAAVASYVLRVRCAGGAHIVRRTWDDIVNLCTMLD--------RDVLARSAKKEAA--------------------------------IEFTPADVLAPDAASGFLKDLLVRPGMAWATPARRFLELEYLDGTLRGGVADDSRATAARQVASLAA------FTTAXXXXXXXXXXXXXDVVESNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVPRPAQTLPA-HPDAARDLAAVCRCLGELGASAFTSSSPALRGAAAP 667
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig85998.16180.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JDI9_9PHAE1.210e-5739.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig85998contigH-elongata_contig85998:1171..2553 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig85998.16180.1mRNA_H-elongata_contig85998.16180.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig85998 689..2588 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig85998.16180.1 ID=prot_H-elongata_contig85998.16180.1|Name=mRNA_H-elongata_contig85998.16180.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=461bp
MGKGYAPPFPLKVIGSGVGLGRAVGAVATSVAPPVIAAAEAGSQVSNNKP
ARRKRRSTGSASNERRKKSVANGPRESSNGVSSSKIGGRGGVTDTVGNRT
GCGGRYASWDALVKPFKQQWDHIEPPPEELAAAEAWQGTSNGIGIGEVLC
SRFSPRPQPGDTTMFSVEQCSARAHPTAVASYVLRVRCGSGAHIVRRTWD
DLVTLCTMLGTSTPTPPRSDVAPRGVSDIEMGIRGGGAGEEGSRSLTTAV
AGSGTTTTTPPIGLEFAPPDVLGREAASGFLRDLLERTGMVWATPTRCFL
ELEYLDGTLRGGPADDRRERVSRQVASVAASVASAVAATAVKIPITLLSG
TLTETQRQQAARAGGVKNAFQGVPAPAPVPCLTVGAPPKTWLGAPRPALS
LMAPHPDAARDLAAVWRCLGELGADTFSSMPFPRTWAATPAAGNRIGVVA
PQRGGVAIVA*
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