prot_H-elongata_contig85848.16167.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig85848.16167.1
Unique Nameprot_H-elongata_contig85848.16167.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length243
Homology
BLAST of mRNA_H-elongata_contig85848.16167.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK)

HSP 1 Score: 172 bits (436), Expect = 1.950e-45
Identity = 87/228 (38.16%), Postives = 142/228 (62.28%), Query Frame = 0
Query:    6 VYKQVARPKDKLVAGTKVLYKRKVGQDSKVEKYKCRLVAQGFWLVEGVHYTEKYSPTLSTASIRMLLATAAAKDSELRHFDVEQAFLKADIDEELYREISEEYQKFPGAVGRLKKVIYGLVQARRCWNNKFCGDMAAIGFQQGKLDPCVFRKVVDSEAEVVVVVHVDDILTHAKDKAIMDRFTAELGQKFKLKDIGDARYYMGCHITRNRKARELKIDQHLYVESMAE 233
            V+++V RP+D+ + G+K ++K K G D +VEKYK RLVAQGF  VEG+ Y E ++P   + SIR+LLA AA  D E+   DV+ AFL  +++EE+Y ++   ++    AV RLKK +YGL QA R W  K   ++  +GF + + D CVF K +D    ++ V +VDD +  +    ++ +  ++LG +F + D+G+  + +   +TRNR+ R +++ Q  Y+E + E
Sbjct: 1026 VFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVPPGHKASADAVWRLKKALYGLKQASREWYKKLSAELKTLGFTRLQADHCVFYKNMDRHPPIIAV-YVDDNMVLSDSLDLVTKTKSDLGSRFDMTDLGEVCWILNMEVTRNRQERTIRLSQSQYIEDILE 1252          
BLAST of mRNA_H-elongata_contig85848.16167.1 vs. uniprot
Match: A0A7D9HXK4_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HXK4_PARCT)

HSP 1 Score: 159 bits (403), Expect = 4.770e-41
Identity = 87/238 (36.55%), Postives = 147/238 (61.76%), Query Frame = 0
Query:    1 MVENCVYKQVARPKDKLVAGTKVLYKRKVGQDSKVEKYKCRLVAQGFWLVEGVHYTEKYSPTLSTASIRMLLATAAAKDSELRHFDVEQAFLKADIDEELYREISEEY--QKFPGAVGRLKKVIYGLVQARRCWNNKFCGDMAAIGFQQGKLDPCVFRKVV-DSEAEVVVVVHVDDILTHAKDKAIMDRFTAELGQKFKLKDIGDARYYMGCHITRNRKARELKIDQHLYVESMAETF 235
            ++EN  ++ V+ PK K V G+K ++K K  ++  V++YK RLVAQG+   EGV Y+E +SP +   +IR LLA + AK+ E+   DV+ AFL+ ++ EE+Y    + Y  ++ P  V +LKK IYGL Q+ RCWNN     + + G++Q + DPC++ K + D    +++ +HVDDIL  + D  ++      +G KFK+ D+G+ ++ +G  I R+R+  ++ I Q  Y++ + + F
Sbjct:  749 LIENETWELVSLPKGKNVVGSKWVFKVKRDENGCVQRYKARLVAQGYTQAEGVDYSEVFSPVVRNTTIRSLLALSNAKNWEVHQMDVKTAFLQGNL-EEIYMRQPDGYVNKELPNHVCKLKKSIYGLKQSARCWNNAIDTFLKSSGYKQMESDPCLYMKSIRDQNGVIILSIHVDDILLFSNDSCMLSEEKKLIGLKFKVDDMGEVKHVLGMVIRRDRRKGKMMISQSTYLQGILKRF 985          
BLAST of mRNA_H-elongata_contig85848.16167.1 vs. uniprot
Match: A0A8J4BUU7_9CHLO (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4BUU7_9CHLO)

HSP 1 Score: 149 bits (377), Expect = 1.210e-40
Identity = 87/229 (37.99%), Postives = 137/229 (59.83%), Query Frame = 0
Query:    9 QVARPKDKLVAGTKVL-----YKRKVGQDSKVEKYKCRLVAQGFWLVEGVHYTEKYSPTLSTASIRMLLATAAAKDSELRHFDVEQAFLKADIDEELYREISEEYQ-KFPGAVGRLKKVIYGLVQARRCWNNKFCGDMAAIGFQQGKLDPCVFRKVVDSEAEVVVVVHVDDILTHAKDKAIMDRFTAELGQKFKLKDIGDARYYMGCHITRNRKARELKIDQHLYVESM 231
            ++ARP +    GT++L     YK K G D ++E++K RLVA+G+    G+ Y E ++PT   AS+R LLA A+AK   +   DV  AFL  +++EEL+ +    Y+ K P    RLK+ IYGL QA RCW  K    +  +GF+  + DP +F K  D    V ++VHVDDI+T + D  ++ +  A +G+ FK++D+G+A+ ++G  I+R     E+K+ Q  Y+E +
Sbjct:   15 ELARPPE----GTRLLPCRWVYKVKRGADGEIERFKARLVAKGYEQRAGIDYGELFAPTSRFASLRALLAVASAKGMPIHQLDVSTAFLNGELEEELWMQQPPGYESKDPNQACRLKRSIYGLKQAPRCWYVKLVAALDKLGFKPSQADPALFIKK-DENGIVYLLVHVDDIVTTSDDVELIKKVKAAVGEAFKIRDLGEAKVFLGMEISRGENG-EVKLSQQRYIEEL 237          
BLAST of mRNA_H-elongata_contig85848.16167.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT)

HSP 1 Score: 157 bits (398), Expect = 2.350e-40
Identity = 89/243 (36.63%), Postives = 143/243 (58.85%), Query Frame = 0
Query:    1 MVENCVYKQVARPKDKLVAGTKVLYKRKVGQDSKVEKYKCRLVAQGFWLVEGVHYTEKYSPTLSTASIRMLLATAAAKDSELRHFDVEQAFLKADIDEELYREISEEYQ--KFPGAVGRLKKVIYGLVQARRCWNNKFCGDMAAIGFQQGKLDPCVFRKVVDSEAE----VVVVVHVDDILTHAKDKAIMDRFTAELGQKFKLKDIGDARYYMGCHITRNRKARELKIDQHLYVESMAETFDV 237
            ++EN  ++ V  P DK + G++ ++K K   D  VEK+K RLVAQG+   EG+ Y E +SP +   SIR LLA A   D E+   DV  AFL+ D+ +E+Y +  E Y+  + P  V +LKK +YGL Q+ RCWN+     + + G++Q   D C++ K V  +      V++ +HVDDIL  + D  +++     +G KFK++D+G+  + +G  I R+R +R L I Q  Y+E + + F++
Sbjct:  859 LMENGTWELVPPPDDKNIVGSRWVFKVKRKADGSVEKFKARLVAQGYSQTEGIDYNEVFSPVVRNTSIRSLLALANILDWEIHQMDVRTAFLQGDLTDEIYMKQPEGYRSKENPDHVCKLKKSLYGLKQSARCWNSTLDSFLKSSGYKQVGADSCLYMKSVKLQNGKINFVILSIHVDDILWFSNDVIMLEEEKVAIGTKFKVEDLGEVSHILGMLIKRDRDSRTLTISQSKYLEGVLKRFNM 1101          
BLAST of mRNA_H-elongata_contig85848.16167.1 vs. uniprot
Match: A0A392PD17_9FABA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Trifolium TaxID=3898 RepID=A0A392PD17_9FABA)

HSP 1 Score: 146 bits (369), Expect = 1.620e-39
Identity = 82/203 (40.39%), Postives = 118/203 (58.13%), Query Frame = 0
Query:   13 PKDKLVAGTKVLYKRKVGQDSKVEKYKCRLVAQGFWLVEGVHYTEKYSPTLSTASIRMLLATAAAKDSELRHFDVEQAFLKADIDEELYREISEEYQKF-PGAVGRLKKVIYGLVQARRCWNNKFCGDMAAIGFQQGKLDPCVFRKVVDSEAEVVVVVHVDDILTHAKDKAIMDRFTAELGQKFKLKDIGDARYYMGCHITRN 214
            PK K   G K +YK K   D  +E+YK RLV  G   VEG+ Y E ++P     ++R++LA AAAK  E+   DV  AFL  D+ EE+Y +    ++ F PG V +LKK +YGL QA RCW  K    +   GF+Q   D  +F  +V  E ++VV+V+VDD++    D A + RF A L + F +KD+G  +Y++G  + RN
Sbjct:   10 PKGKKPLGCKWVYKIKHNSDGTIERYKARLVIFGNHQVEGIDYNETFAPVAKMVTVRLVLAVAAAKKWEIHQMDVHNAFLHGDLHEEVYMKPPPGFRTFQPGLVCKLKKSLYGLKQAPRCWFAKLSSALKKFGFRQSCSDYSLFTLLVH-EVQIVVLVYVDDLIVCGNDSAAIQRFKAYLSKCFHMKDLGTLKYFLGVEVARN 211          
BLAST of mRNA_H-elongata_contig85848.16167.1 vs. uniprot
Match: A0A8J4LT00_9CHLO (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4LT00_9CHLO)

HSP 1 Score: 150 bits (380), Expect = 4.520e-39
Identity = 88/229 (38.43%), Postives = 137/229 (59.83%), Query Frame = 0
Query:    9 QVARPKDKLVAGTKVL-----YKRKVGQDSKVEKYKCRLVAQGFWLVEGVHYTEKYSPTLSTASIRMLLATAAAKDSELRHFDVEQAFLKADIDEELYREISEEYQ-KFPGAVGRLKKVIYGLVQARRCWNNKFCGDMAAIGFQQGKLDPCVFRKVVDSEAEVVVVVHVDDILTHAKDKAIMDRFTAELGQKFKLKDIGDARYYMGCHITRNRKARELKIDQHLYVESM 231
            ++ARP +    GT++L     YK K G D ++E++K RLVA+G+    G+ Y E ++PT   AS+R LLA AAAK   +   DV  AFL  +++EEL+ +    Y+ K P    RLK+ IYGL QA RCW  K    +  +GF+  + DP +F K  D    V ++VHVDDI+T + D  ++ +  A +G+ FK++D+G+A+ ++G  I+R     E+K+ Q  Y+E +
Sbjct:   23 ELARPPE----GTRLLPCRWVYKVKRGADGEIERFKVRLVAKGYEQRAGIDYGELFAPTSRFASLRALLAVAAAKGMPIHQLDVSTAFLNGELEEELWMQQPPGYESKDPNLACRLKRSIYGLKQAPRCWYVKLVAALDKLGFKPSQADPALFIKK-DENGIVYLLVHVDDIITTSDDVELIKKVKAAVGEAFKIRDLGEAKVFLGMEISRGENG-EVKLSQRRYIEEL 245          
BLAST of mRNA_H-elongata_contig85848.16167.1 vs. uniprot
Match: A0A6H5GI29_9HEMI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GI29_9HEMI)

HSP 1 Score: 152 bits (384), Expect = 1.050e-38
Identity = 85/237 (35.86%), Postives = 136/237 (57.38%), Query Frame = 0
Query:    1 MVENCVYKQVARPKDKLVAGTKVLYKRKVGQDSKVEKYKCRLVAQGFWLVEGVHYTEKYSPTLSTASIRMLLATAAAKDSELRHFDVEQAFLKADIDEELYREISEEYQKFPGAVGRLKKVIYGLVQARRCWNNKFCGDMAAIGFQQGKLDPCVFRKVVDSEAEVVVVVHVDDILTHAKDKAIMDRFTAELGQKFKLKDIGDARYYMGCHITRNRKARELKIDQHLYVESMAETFDV 237
            +V+N  Y+ V  P  K     K +YK K  +  +  +YK RLV +G   V G+ + E YSP +  +S+R L++ AA KD ++ H DV+ A+L  D++EE+Y      + +  G V RLKK +YGL QA RCWN K    +A + F + K DPC+F +  +S A V+V + VDD++  + +     +  + L   F++KD+G     +G ++TR+R  R+L IDQ  Y+E + + F +
Sbjct:  251 LVKNNTYEVVDLPPGKKTLSMKWVYKIKETEGDR--RYKARLVVRGCAQVPGLDFQETYSPVVKYSSLRFLMSMAAVKDWDIDHLDVKTAYLYGDLNEEIYVRPPANFSEPDGQVWRLKKAVYGLKQAGRCWNEKITEVLAQMKFHRSKSDPCIFVRNTES-AIVIVALWVDDVIVFSDNAGEKSKVKSSLAHHFEMKDLGPIHRCLGMNVTRDRARRQLSIDQTHYIEQVLKRFSM 484          
BLAST of mRNA_H-elongata_contig85848.16167.1 vs. uniprot
Match: A0A6H5GGZ1_9HEMI (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GGZ1_9HEMI)

HSP 1 Score: 152 bits (384), Expect = 1.750e-38
Identity = 85/237 (35.86%), Postives = 136/237 (57.38%), Query Frame = 0
Query:    1 MVENCVYKQVARPKDKLVAGTKVLYKRKVGQDSKVEKYKCRLVAQGFWLVEGVHYTEKYSPTLSTASIRMLLATAAAKDSELRHFDVEQAFLKADIDEELYREISEEYQKFPGAVGRLKKVIYGLVQARRCWNNKFCGDMAAIGFQQGKLDPCVFRKVVDSEAEVVVVVHVDDILTHAKDKAIMDRFTAELGQKFKLKDIGDARYYMGCHITRNRKARELKIDQHLYVESMAETFDV 237
            +V+N  Y+ V  P  K     K +YK K  +  +  +YK RLV +G   V G+ + E YSP +  +S+R L++ AA KD ++ H DV+ A+L  D++EE+Y      + +  G V RLKK +YGL QA RCWN K    +A + F + K DPC+F +  +S A V+V + VDD++  + +     +  + L   F++KD+G     +G ++TR+R  R+L IDQ  Y+E + + F +
Sbjct:  856 LVKNNTYEVVDLPPGKKTLSMKWVYKIKETEGDR--RYKARLVVRGCAQVPGLDFQETYSPVVKYSSLRFLMSMAAVKDWDIDHLDVKTAYLYGDLNEEIYVRPPANFSEPDGQVWRLKKAVYGLKQAGRCWNEKITEVLAQMKFHRSKSDPCIFVRNTES-AIVIVALWVDDVIVFSDNAGEKSKVKSSLAHHFEMKDLGPIHRCLGMNVTRDRARRQLSIDQTHYIEQVLKRFSM 1089          
BLAST of mRNA_H-elongata_contig85848.16167.1 vs. uniprot
Match: A0A8J4FPZ7_9CHLO (Uncharacterized protein n=20 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4FPZ7_9CHLO)

HSP 1 Score: 152 bits (383), Expect = 2.390e-38
Identity = 87/229 (37.99%), Postives = 136/229 (59.39%), Query Frame = 0
Query:    9 QVARPKDKLVAGTKVL-----YKRKVGQDSKVEKYKCRLVAQGFWLVEGVHYTEKYSPTLSTASIRMLLATAAAKDSELRHFDVEQAFLKADIDEELYREISEEYQ-KFPGAVGRLKKVIYGLVQARRCWNNKFCGDMAAIGFQQGKLDPCVFRKVVDSEAEVVVVVHVDDILTHAKDKAIMDRFTAELGQKFKLKDIGDARYYMGCHITRNRKARELKIDQHLYVESM 231
            ++ARP +    GT++L     YK K G D ++E++K  LVA+G+    G+ Y E ++PT   AS+R LLA AAAK   +   DV  AFL  +++EEL+ +    Y+ K P    RLK+ IYGL QA RCW  K    +  +GF+  + DP +F K  D    V ++VHVDDI+T + D  ++ +  A +G+ FK++D+G+A+ ++G  I+R     E+K+ Q  Y+E +
Sbjct:  879 ELARPPE----GTRLLPCRWVYKVKRGADGEIERFKAHLVAKGYEQRAGIDYGELFAPTSRFASLRALLAVAAAKGMPIHQLDVSTAFLNGELEEELWMQQPPGYESKDPNLACRLKRSIYGLKQAPRCWYVKLVAALDKLGFKPSQADPALFIKKKDENGIVYLLVHVDDIVTTSDDVELIKKVKAAVGEAFKIRDLGEAKVFLGMEISRGENG-EVKLTQQRYIEEL 1102          
BLAST of mRNA_H-elongata_contig85848.16167.1 vs. uniprot
Match: A0A1Y1IVX6_KLENI (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IVX6_KLENI)

HSP 1 Score: 151 bits (381), Expect = 4.240e-38
Identity = 87/225 (38.67%), Postives = 134/225 (59.56%), Query Frame = 0
Query:    1 MVENCVYKQVARPKDKLVAGTKVLYKRKVGQDSKVEKYKCRLVAQGFWLVEGVHYTEKYSPTLSTASIRMLLATAAAKDSELRHFDVEQAFLKADIDEELYREISEEYQKF-PGAVGRLKKVIYGLVQARRCWNNKFCGDMAAIGFQQGKLDPCVFRKVVDSEAEVVVVVHVDDILTHAKDKAIMDRFTAELGQKFKLKDIGDARYYMGCHITRNRKARELKIDQ 224
            ++EN  ++ V +P+       K +YK K      +E++K RLVA+GF   +GV + E Y+P     ++R LL   AA+D EL   DV+ AFL  +++EE+Y +  + Y++  P  V RLKK IYGL QA R W+ K   ++  I F+  + D  +F  V+D E  V VVV VDDIL  AK +  + +  A L +KF ++D+G A Y++G  +TR+R+AR +K+ Q
Sbjct:  587 LLENGTWELVPKPEGVKPVPMKWVYKIKRDAAGNIERFKSRLVAKGFLQRQGVDFEEVYAPVSKHTTLRALLGVVAARDLELHQLDVKTAFLNGELEEEIYMQQPQGYEQGGPETVCRLKKTIYGLRQAPRAWHQKLKTELGEIEFRASESDAALFTGVIDGE-RVWVVVWVDDILIAAKGEQRLAKVKAHLSEKFDVRDLGPAEYFLGMELTRDRRARTIKLTQ 810          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig85848.16167.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0C2WN23_AMAMK1.950e-4538.16Integrase catalytic domain-containing protein (Fra... [more]
A0A7D9HXK4_PARCT4.770e-4136.55Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A8J4BUU7_9CHLO1.210e-4037.99Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7D9IUY0_PARCT2.350e-4036.63Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A392PD17_9FABA1.620e-3940.39Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8J4LT00_9CHLO4.520e-3938.43Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5GI29_9HEMI1.050e-3835.86Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5GGZ1_9HEMI1.750e-3835.86Integrase catalytic domain-containing protein (Fra... [more]
A0A8J4FPZ7_9CHLO2.390e-3837.99Uncharacterized protein n=20 Tax=Volvox reticulife... [more]
A0A1Y1IVX6_KLENI4.240e-3838.67Integrase catalytic domain-containing protein (Fra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 6..239
e-value: 2.5E-48
score: 164.8
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 16..228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig85848contigH-elongata_contig85848:1125..1853 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig85848.16167.1mRNA_H-elongata_contig85848.16167.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig85848 1125..1853 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig85848.16167.1 ID=prot_H-elongata_contig85848.16167.1|Name=mRNA_H-elongata_contig85848.16167.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=243bp
MVENCVYKQVARPKDKLVAGTKVLYKRKVGQDSKVEKYKCRLVAQGFWLV
EGVHYTEKYSPTLSTASIRMLLATAAAKDSELRHFDVEQAFLKADIDEEL
YREISEEYQKFPGAVGRLKKVIYGLVQARRCWNNKFCGDMAAIGFQQGKL
DPCVFRKVVDSEAEVVVVVHVDDILTHAKDKAIMDRFTAELGQKFKLKDI
GDARYYMGCHITRNRKARELKIDQHLYVESMAETFDVKKESKI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2