prot_H-elongata_contig8565.16149.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8565.16149.1
Unique Nameprot_H-elongata_contig8565.16149.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length501
Homology
BLAST of mRNA_H-elongata_contig8565.16149.1 vs. uniprot
Match: D7FXY8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXY8_ECTSI)

HSP 1 Score: 493 bits (1270), Expect = 3.670e-168
Identity = 263/356 (73.88%), Postives = 296/356 (83.15%), Query Frame = 0
Query:   10 QLHYERDLGVTIDIIDPRKYILPQNPVPLPKEDEALLNWEEGDVPSSGRREALSTSARRRAVKTSVTWLKKTVYLTNDTFDPVHQFKSEQQSQADKQLELEREIARGGNQDRKMLSEESFMHANSRKPLVHSDKNKRHLKAEWIMPVMPDVSLWPNTYTTVAFDKDPAEDDAVKGSKARKRKRANEALVCNVKRTTFEGNSNEIITGSYLMPKEKKLKRDEGDEXXXXXXXXXXXXXXX--VGYVFVKDYKFNIIHYAQTHYDGNPHLMFMINPDTSEATYCRLSAKVELANLPREQGQPKTGRGARVSHREVSEEEMINAHKKISADLQLEGDYDYLAGLGGIQENGYAESAEGG 363
            +LHYERDLGV ID+IDPR Y+LP+  VPLP EDEALLNW EGD P S ++E LSTSARR+ V TSVTWLKKTVYLTND FDPVHQFKSEQQ+QADK++ELE+EIARG  QDRKML EESF+HANS KPLVH D +KRHL AEW+MPVMPDVSLWPNTYTTV FDKDPA D+ VKGS+ARKRKRA EALVCNVKRTTFEGNS+E+ITGSYLMPK K  K+ EG  XXXXXXXXX        VGY FVKDYKFNI+HYAQT YDGNPHL+F+IN DT EA++C+LSAKVELANLPR QGQP TGRGA VS R +S EE+ NA KK+SADLQLEG+Y Y+AG  G+   G+A   + G
Sbjct:   68 KLHYERDLGVPIDVIDPRNYLLPKKAVPLPPEDEALLNWREGDGPGSVKKEDLSTSARRKTVDTSVTWLKKTVYLTNDPFDPVHQFKSEQQTQADKEVELEKEIARGKKQDRKMLIEESFLHANSNKPLVHQDASKRHLTAEWVMPVMPDVSLWPNTYTTVMFDKDPAADETVKGSEARKRKRAGEALVCNVKRTTFEGNSHEVITGSYLMPKGKATKKGEGXXXXXXXXXXXKMDVEDGSVGYDFVKDYKFNIVHYAQTQYDGNPHLLFVINKDTQEASFCKLSAKVELANLPRGQGQPATGRGAVVSKRSLSPEEVSNARKKVSADLQLEGEY-YIAGEDGLSNGGHAAGGDTG 422          
BLAST of mRNA_H-elongata_contig8565.16149.1 vs. uniprot
Match: A0A835YRH5_9STRA (Paf1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRH5_9STRA)

HSP 1 Score: 218 bits (556), Expect = 8.610e-61
Identity = 141/337 (41.84%), Postives = 201/337 (59.64%), Query Frame = 0
Query:   10 QLHYERDLGVTIDIIDPRKYILPQNPVPLPKEDEALLNWE--EGDVPSSGRREALSTSARRRAVKTSVTWLKKTVYLTNDTFDPVHQFKSEQQSQADKQLELEREIARGGNQDRKMLSEESFMHANSRKPLVHSDKNKRHLKAEWIMPVMPDVSLWPNTYTTVAFDKDPAEDD-AVKGSKARKRKRANEALVCNVKRTTFEGNSNEIITGSYLMPKEKKLKRDEGDEXXXXXXXXXXXXXXXVGYVFVKDYKFNIIHYAQTHYDGNP-------HLMFMINPDTSEATYCRLSAKVELANLPREQGQPKTGRGARVSHREVSEEEMINAHKKISADL 336
            +LH  RDLGV IDIID R Y +P  P  L  +D  LL W+  E    ++   E  S   +R+ V TSVTWLKKTVYLTND FD VH+F+S++Q Q D +  +++++      DR     +SF  ANS+K LVH+    + L  EW+MPV+PD +LW NTYT V FD DP E++  + G + RKR+RA++A+V NV++   + + +E +TGSY++PKE      EG    X   XX        G+ +VKDY+ N+ +Y     D          HL+F+I+  +S+AT+C+LSA+V+LANLP E  Q   G G  V+ R  S+EE     +K++ DL
Sbjct:  152 KLHCNRDLGVDIDIIDSRSYSVPDKPPTLHPKDAELLQWDKVERGNGAAEAEEGFSRRMQRKQVDTSVTWLKKTVYLTNDPFDAVHKFRSDRQVQMDAKERMQKDMEESRKTDRVSAVLQSFAEANSKKKLVHA--TNKSLTPEWVMPVLPDAALWGNTYTHVVFDIDPIEEEHLIAGPRQRKRQRADKAIVGNVRKLR-KSDGDEFVTGSYMVPKEA----GEGG-GGXSAEXXEKGAEGGTGFAWVKDYQMNVQNYPAGQGDSGSGSSGAMAHLVFIIDQASSKATFCQLSARVDLANLPAED-QANRGPGMEVARRPPSDEEFQAMGEKVAKDL 479          
BLAST of mRNA_H-elongata_contig8565.16149.1 vs. uniprot
Match: F0W354_9STRA (RNA polymerase IIassociated factor 1 putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W354_9STRA)

HSP 1 Score: 122 bits (307), Expect = 2.150e-26
Identity = 96/312 (30.77%), Postives = 161/312 (51.60%), Query Frame = 0
Query:   10 QLHYERDLGVTIDIIDPRKYILPQNPVPLPKEDEALLNWEEGDVPSSGRREALSTSARRRAVKTSVTWLKKTVYLTNDTFDPVHQFKSEQQSQADKQLELEREIARGGNQDRKMLSEESFMHANSRKPLVHSDKNKRHLKAEWIMPVMPDVSLWPNTYTTVAFDKDPAEDDAVKGSKARKRKRANEALVCNVKRTTFEGNSNEIITGSYLMPKEKKLKRDEGDEXXXXXXXXXXXXXXXVGYVFVKDYKFNIIHYAQTHYDGNPHLMFMINPDTSEATYCRLSAKVELANLPREQGQPKTGRGARVSHREVS 321
            ++H E +LG++ID+IDP KY +P    PL   DEA+L  +E         ++  T ++ R V   V+WL++T Y+ ND ++PVH+FKSE + Q++ +   E  +A       K  +E+SF   N  + LVH  K  ++LK   I  V PD SL+PN Y  +++D  P+ DD  K    R+ +    AL+C V R + EG+ +  I GS L+P   + +  + +                  Y + ++Y  ++        + + + +FM++P++ E TYC L  +++L    +  G+ +  RGA V  RE S
Sbjct:  165 EIHEEPNLGLSIDLIDPAKYEVPTVTEPLEAGDEAVLMMKET--------QSKDTKSKARPV---VSWLRRTEYMGNDLYEPVHKFKSEVEFQSELREGTENALAEEVQVTLKQRAEDSFKDVNDPEVLVHPFK--KNLKPAKIWDVYPDQSLYPNKYAHLSYDVLPSMDDKGKSIPQRESR----ALLCGVSRKS-EGSDH--IQGSILLPVSAQAENPDAEVGEK--------------YGYFREYLLSVQQLDNKGKEDSQNRLFMLDPESQEFTYCELLHRIQLKKT-KFTGEDQRRRGAIVHRREYS 441          
BLAST of mRNA_H-elongata_contig8565.16149.1 vs. uniprot
Match: A0A8K1CCM9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCM9_PYTOL)

HSP 1 Score: 117 bits (292), Expect = 1.810e-24
Identity = 92/316 (29.11%), Postives = 163/316 (51.58%), Query Frame = 0
Query:   10 QLHYERDLGVTIDIIDPRKYILPQNPVPLPKEDEALLNWEEGDVPSSGRREALSTSARRRAVKTSVTWLKKTVYLTNDTFDPVHQFKSEQQSQADKQLELEREIARGGNQDRKMLSEESFMHANSRKPLVHSDKNKRHLKAEWIMPVMPDVSLWPNTYTTVAFDKDPAEDDAVKGSKARKRKRANEALVCNVKRTTFEGNSNEIITGSYLMPKEKKLKRDEGDEXXXXXXXXXXXXXXXVGYVFVKDYKFNIIHYAQTHYDGNPHLMFMINPDTSEATYCRLSAKVELANLPREQGQPKTGRGARVSHREVSEEEM 325
            ++H + +LG+ ID+IDP KY +P+NP PL   DE +L  +E +   +G+ +A          + SVTWL++T Y+  D  +  H+FKSE + Q+  +   E  +A       +  +E SF  A++ K LVH  K  ++LKA  +  V PD  + PN Y  +++D  P++D  +KG    +R+  + AL+C V +   +    +++ GS L+P  +  +  + DE                 + + ++Y+ +I        D + H++FM++P+++  TY  L  +++L    +  G  K  RGA V  R+ SE E+
Sbjct:  163 EVHEDSNLGLNIDLIDPAKYEVPENPGPLEVGDEQVLMMKEVNA-KNGKAKA----------RPSVTWLRRTEYMGTDLSEMTHKFKSEVEIQSALREGTENALAEVVQLSLEDRAEASFRDASNAKTLVHPFK--KNLKAAKVWDVFPDQIVAPNKYAILSYDLLPSQD--LKGKSVTERE--SRALLCGVSK---KSQGADVVQGSILLPNARDEEEKDNDEPQAEK------------FGYYREYQLSIDVLENRVRDESQHVIFMLDPESNHFTYADLLHRIQLRKT-KLNGDEKRRRGAIVRRRDYSEAEL 445          
BLAST of mRNA_H-elongata_contig8565.16149.1 vs. uniprot
Match: A0A7S3YEK7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEK7_HETAK)

HSP 1 Score: 107 bits (267), Expect = 8.190e-23
Identity = 72/235 (30.64%), Postives = 122/235 (51.91%), Query Frame = 0
Query:   67 RRRAVKTSVTWLKKTVYLTNDTFD-PVHQFKSEQQSQADKQLELEREIARGGNQDRKMLSEESFMHANSRKPLVHSDKNKRHLKAEWIMPVMPDVSLWPNTYTTVAFDKDPA-EDDAVKGSK--ARKRKRANEALVCNVKRTTFEGNSNEIITGSYLMPKEKKLKRDEGDEXXXXXXXXXXXXXXXVGYVFVKDYKFNIIHYAQTHYDGNPHLMFMINPDTSEATYCRLSAKVEL 297
            +R++V T+VTW+K+T YL+ND +  PVH FKS+  + A++   L++E+     Q      E +F HA ++            L+AEW +PV+PDV LW N +  V FD DP  +DD  K  +  A K++R  +A++ +V+     G S  ++  SYL+PK  +    EG E               + +  ++ Y+ ++     T        +F+++ +  +ATYCRL  +V+L
Sbjct:    8 KRKSVDTNVTWMKRTTYLSNDLYGAPVHAFKSQAAAVAEQNAGLDQEMVEVNLQSAATKIEATF-HAAAKDLAALRHPTNPGLRAEWALPVLPDVGLWANVFMHVGFDLDPVTQDDPNKDPEHIAEKKQRFEKAIISDVRENEGGGTSKPVMVASYLVPKAGQTGAGEGGE---------------LAFEHLRGYQIDVRDTENT-------FVFLVDAEGGQATYCRLDTRVDL 219          
BLAST of mRNA_H-elongata_contig8565.16149.1 vs. uniprot
Match: A0A067CSA2_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CSA2_SAPPC)

HSP 1 Score: 105 bits (261), Expect = 9.900e-21
Identity = 100/334 (29.94%), Postives = 158/334 (47.31%), Query Frame = 0
Query:   14 ERDLGVTIDIIDPRKYILPQNPVPLPKEDEALLNWEEGDVPSSGRREALSTSARRRAVKTSVTWLKKTVYLTNDTFDPVHQFKSEQQSQA---DKQLELEREIARGGNQDRKMLSEESFMHANSRKPLVHSDKNKRHLKAEWIMPVMPDVSLWPNTYTTVAFDKDPAEDDAVKGSKARKRKRANEALVCNVKRTTFEGNSNEIITGSYLMPKEKKLKRD-EGDEXXXXXXXXXXXXXXXVGYVFVKDYKFNIIHYAQTHYDGNPHLMFMINPDTSEATYCRLSAKVELANLPREQGQPKTGRGARVSHREVSEEEMINAHKKISADLQLEGDYD 343
            ER+LG+T+D+IDP KY +P     +  EDEAL+   E              S  +  ++  V+WL++T Y+  D  + VH FK+E + Q    DK   + + I     +D ++ +EESF +  +++ + H    K++LKA  +  V PD  L  N Y+ +++D  P+E+      K R+ +    +++ NV   T     ++++ GS L P     K D EG E                 + F +DY  NI H+     +    LM M+ P TS ATYC LS  + L    +  G  K  RGA V  R  SE E     K++ + + + G YD
Sbjct:  112 ERNLGLTVDLIDPEKYEVPVG-AQMDPEDEALMKMPEI---------VNGASLTKAKIRPHVSWLRRTEYMATDLSEAVHAFKNESELQTEIRDKNQSMLQVI-----KDIEVRAEESFTNCPTKETVKHP--LKKNLKAAEVWDVFPDELLSSNVYSILSYDILPSEETTDANIKEREAR----SILRNV--VTVSQPGSDVLLGSVLFPSTHDDKSDDEGSEK----------------FKFFRDYILNISHFP----NDVQQLMLMLKPGTSAATYCGLSTNIMLKKT-KLGGDEKRRRGAVVHRRPYSEAE---EEKRLESLMAVGGVYD 398          
BLAST of mRNA_H-elongata_contig8565.16149.1 vs. uniprot
Match: A0A024FZ64_9STRA (Uncharacterized protein n=8 Tax=Albugo candida TaxID=65357 RepID=A0A024FZ64_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.290e-18
Identity = 94/335 (28.06%), Postives = 156/335 (46.57%), Query Frame = 0
Query:   10 QLHYERDLGVTIDIIDPRKY--------------------ILPQNPVPLPKEDEALLNWEEGDVPSSGRREALSTSARRRAVKTSVTWLKKTVYLTNDTFDPVHQFKSEQQSQADKQLELEREIARGGNQDRKMLSEESFMHANSRKPLVHSDKNKRHLKAEWIMPVMPDVSLWPNTYTTVAFDKDPAEDDAVKGSKARKRKRANEALVCNVKRTTFEGNSNEIITGSYLMPKEKKLKRDEGDEXXXXXXXXXXXXXXXVGYVFVKDYKFNIIHYAQTHYDGNPHLMFMINPDTSEATYCRLSAKVELANLPREQGQPKTGRGARVSHREVSEEE 324
            ++H E +LG++ID+IDP KY                     +P    PL   DEA+L  +E         ++  T  + R V   V+WL++T Y+ ND ++PVH+FKSE + Q++ +   E  +A       +  +E+SF   N    +VH  K  ++LKA  +  V PD SL+PN Y  +++D  P+ DD  K    R+ +    AL+C V R   EG+ +  I GS L+P   + +  + +                +    + + +  +I Y +  Y   P      +P++ E TYC L  +++L    +  G+ +   GA V  RE S+ E
Sbjct:  165 EIHEEPNLGLSIDLIDPAKYEGRSLDGHLYGRVLMFCVIDTVPTKAEPLEAGDEAVLMMKET--------QSKDTKYKARPV---VSWLRRTEYMGNDLYEPVHKFKSEVEFQSELREGTENALAEEVQVTLEQRAEDSFKDINDPSLIVHPFK--KNLKAAKVWDVYPDQSLYPNKYAHLSYDVLPSTDDKGKSIPQRESR----ALLCGVSRKN-EGSDH--IQGSILLPVSAQAENPDAE----VGEKYGYFREYLLSVQQLDNVRQELILYLRLLYSRRPE-----HPESQEFTYCELLHRIQLKKT-KISGEDQRRHGAIVHRREYSKAE 469          
BLAST of mRNA_H-elongata_contig8565.16149.1 vs. uniprot
Match: F0XY28_AURAN (AP2/ERF domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XY28_AURAN)

HSP 1 Score: 75.5 bits (184), Expect = 1.400e-10
Identity = 74/218 (33.94%), Postives = 104/218 (47.71%), Query Frame = 0
Query:   11 LHYERDLGVTIDIIDPRKYILPQNPVP-LPKEDEALLNWEEGDVPSSGRREALSTSARRRAVKTSVTWLKKTVYLTNDTFDPVHQFKS---EQQSQADKQLELEREIARGGNQDRKMLSEESFMHANSRKPLVHSDKNKRHLKAEWIMPVMPDVSLWPNTYTTVAFDKDPAEDDAVKGSKARKRKR---ANEALVCNVKRTTFEGNSNEIITGSYLMP 221
            LH E D+GV ID+I  +    P +P   LP EDEA+L   E  + +  +       AR +    S  WLK TVYL+N+   PVH+F S   EQQ  A + +  + E   G        S  +    +     +  DK K HLKAE+ +P+ PD+ LW N+Y  VA   DP  D AV+G      K       ALV  V  T+ +   + +++ SY  P
Sbjct:  380 LHCEPDVGVKIDLI--KGDTPPGDPTNVLPAEDEAILKSLEPLMGADDK--GGDAFARGKKHAKSAVWLKNTVYLSNNLHAPVHEFGSRAKEQQKLAAETMNAKIEHVGGTGAKAVDASFAAAAALDGDLAALKHDK-KPHLKAEFCVPLAPDLDLWANSYVQVAVRDDP--DFAVRGRTDEFGKPLPLGTTALVSKVCTTSHKRRGHNVLSASYSTP 590          
BLAST of mRNA_H-elongata_contig8565.16149.1 vs. uniprot
Match: A0A835ATR3_9POAL (Uncharacterized protein n=4 Tax=Paniceae TaxID=147428 RepID=A0A835ATR3_9POAL)

HSP 1 Score: 71.2 bits (173), Expect = 2.010e-9
Identity = 55/182 (30.22%), Postives = 92/182 (50.55%), Query Frame = 0
Query:    1 SSIRNHANAQLHYERDLGVTIDIIDPRKYILPQNPVPLPKEDEALLNWEEGDVPSSGRREALSTSARRRAVKTSVTWLKKTVYLTNDTFDPVHQFKSEQQSQADKQLELEREIARGGNQDRKM---LSEESFMHANSRKPLVHSDKNKRHLKAEWIMPVMPDVSLWPNTYTTVAFDKDPAED 179
            +S+  +   ++    DLG+ +D++D   Y  P   +P+  EDE LL  +E   P   ++E +    + R     V+WL KT Y+++ + D      +E+Q++  ++  + R        DR+      EESF  A S+   VH  + KR +KAEW+MP++PD   + + Y  V FD DP  D
Sbjct:  276 TSLEKNYMPKMIVPEDLGIPLDLLDMSVYNPPAVQLPIAPEDEELLQDDEVHTPI--KQEGIRK--KERPTDKGVSWLVKTQYISSLSTDAAKTSLTEKQAKEMRESRMGRNTFLDNLNDREKQIKAIEESFRAAKSQP--VH--QTKRGMKAEWVMPLLPDFDRYEDPYVMVNFDGDPTAD 449          
BLAST of mRNA_H-elongata_contig8565.16149.1 vs. uniprot
Match: A0A7S0IQP9_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IQP9_9EUKA)

HSP 1 Score: 70.1 bits (170), Expect = 4.710e-9
Identity = 61/231 (26.41%), Postives = 101/231 (43.72%), Query Frame = 0
Query:   10 QLHYERDLGVTIDIIDPRKYILPQNPVPLPKEDEALLN--WEEGDVPSSGRREALSTSARRRAVKTSVTWLKKTVYLTNDTFDPVHQFKSE---QQSQADKQLELEREIARGGNQD---RKM-----LSEESFMHANSRKPLVHSDKNKRHLKAEWIMPVMPDVSLWPNTYTTVAFDKDPAEDDAVKGSKARKRKRANEALVCNVKRTTFEGNSNEIITGSYLMPKEKKLK 227
            +L  E DLG+ ID++DP  Y         P++ E L +    E   PSS     ++ SA  + ++  +TWL+KT  + N+ ++  H+   E   + S    + E    +  G   D   RK+     + E+SF                  LKAE ++PV+PD   W N+Y  + FD DP  + A        RKR  + +V        +G   +    +YL+PK + ++
Sbjct:  283 ELLAEPDLGIAIDLVDPSVYEAAPGATLAPEDQELLTSAATHERSAPSS-----MNKSAVTKQMRNKITWLRKTQLMGNNLYEATHKHPKEHVERDSYRKSKKESSALVTAGSGSDPFRRKIGEIVDVIEQSFADVEKLGCGQIKHPTNAALKAEAVLPVLPDFDCWENSYVQMQFDFDPGLEHAASDKSKLSRKRLAQGIVKGQSTPARDGQPAQRYV-AYLLPKSEPVE 507          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8565.16149.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D7FXY8_ECTSI3.670e-16873.88Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YRH5_9STRA8.610e-6141.84Paf1-domain-containing protein n=1 Tax=Tribonema m... [more]
F0W354_9STRA2.150e-2630.77RNA polymerase IIassociated factor 1 putative n=1 ... [more]
A0A8K1CCM9_PYTOL1.810e-2429.11Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S3YEK7_HETAK8.190e-2330.64Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A067CSA2_SAPPC9.900e-2129.94Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A024FZ64_9STRA1.290e-1828.06Uncharacterized protein n=8 Tax=Albugo candida Tax... [more]
F0XY28_AURAN1.400e-1033.94AP2/ERF domain-containing protein n=1 Tax=Aureococ... [more]
A0A835ATR3_9POAL2.010e-930.22Uncharacterized protein n=4 Tax=Paniceae TaxID=147... [more]
A0A7S0IQP9_9EUKA4.710e-926.41Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 223..243
NoneNo IPR availableCOILSCoilCoilcoord: 363..390
NoneNo IPR availablePANTHERPTHR23188:SF12PAF1 HOMOLOG, PAF1/RNA POLYMERASE II COMPLEX COMPONENTcoord: 3..383
IPR007133RNA polymerase II associated factor Paf1PFAMPF03985Paf1coord: 3..386
e-value: 1.4E-37
score: 129.7
IPR007133RNA polymerase II associated factor Paf1PANTHERPTHR23188FAMILY NOT NAMEDcoord: 3..383

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8565contigH-elongata_contig8565:501..9432 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8565.16149.1mRNA_H-elongata_contig8565.16149.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8565 59..9432 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8565.16149.1 ID=prot_H-elongata_contig8565.16149.1|Name=mRNA_H-elongata_contig8565.16149.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=501bp
SSIRNHANAQLHYERDLGVTIDIIDPRKYILPQNPVPLPKEDEALLNWEE
GDVPSSGRREALSTSARRRAVKTSVTWLKKTVYLTNDTFDPVHQFKSEQQ
SQADKQLELEREIARGGNQDRKMLSEESFMHANSRKPLVHSDKNKRHLKA
EWIMPVMPDVSLWPNTYTTVAFDKDPAEDDAVKGSKARKRKRANEALVCN
VKRTTFEGNSNEIITGSYLMPKEKKLKRDEGDEEEEEEEEEDEEEGEGVG
YVFVKDYKFNIIHYAQTHYDGNPHLMFMINPDTSEATYCRLSAKVELANL
PREQGQPKTGRGARVSHREVSEEEMINAHKKISADLQLEGDYDYLAGLGG
IQENGYAESAEGGSQQQGNEEALEEEEEKEEEEGEEGLRENGHVDGEMSL
GHGTAAFLTGRGRTGRGSTCWAWHWSRRRQTLPSRGLKALRETLSAPTRT
TTIRSRNAKSIYQHTINSILKTRSRCHSIILVPSGVLSAESARRAKASVS
*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007133RNA_pol_II-assoc_Paf1