prot_H-elongata_contig85604.16147.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig85604.16147.1
Unique Name	prot_H-elongata_contig85604.16147.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	107

Homology

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BLAST of mRNA_H-elongata_contig85604.16147.1 vs. uniprot
Match: A0A6H5JF91_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JF91_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 1.440e-57
Identity = 86/103 (83.50%), Postives = 94/103 (91.26%), Query Frame = 0

Query:    4 VRDRHYDTGALLLGLGTFAAIEGPVNTFLRAQKLFPGPHLYVGAGCVVAWAVSASLVPQMQKGNEVARTAHIVINFGMIGLFAWQIWTGIPIAQKVWEFTKFP 106
            VRD HYD GALLLGLGTFAA+EGPVNT+LRAQKLFPGPHLY GA  VVAWAV+ASLVP+MQKG++ AR AH+ INFGMI LFAWQI+TGIPIAQKVWEFTKFP
Sbjct:  244 VRDLHYDAGALLLGLGTFAAVEGPVNTYLRAQKLFPGPHLYAGAAVVVAWAVAASLVPKMQKGDDTARIAHMAINFGMIALFAWQIFTGIPIAQKVWEFTKFP 346

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BLAST of mRNA_H-elongata_contig85604.16147.1 vs. uniprot
Match: A0A835YJX9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJX9_9STRA)

HSP 1 Score: 164 bits (416), Expect = 1.410e-48
Identity = 74/103 (71.84%), Postives = 87/103 (84.47%), Query Frame = 0

Query:    4 VRDRHYDTGALLLGLGTFAAIEGPVNTFLRAQKLFPGPHLYVGAGCVVAWAVSASLVPQMQKGNEVARTAHIVINFGMIGLFAWQIWTGIPIAQKVWEFTKFP 106
            VRD+HY+ G+L+LGLG FAAIEGPVNT++RA KLFPGPHLY GAG VVAW ++ASLV QMQKGNE AR AHI INFG++G FAWQ+ TG+ I  KV EFTK+P
Sbjct:  175 VRDKHYEVGSLILGLGVFAAIEGPVNTYIRAGKLFPGPHLYAGAGIVVAWGIAASLVQQMQKGNEWARLAHIGINFGILGFFAWQVNTGLGITAKVLEFTKWP 277

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BLAST of mRNA_H-elongata_contig85604.16147.1 vs. uniprot
Match: A0A0M0JWP2_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JWP2_9EUKA)

HSP 1 Score: 150 bits (380), Expect = 3.280e-43
Identity = 69/105 (65.71%), Postives = 80/105 (76.19%), Query Frame = 0

Query:    2 GQVRDRHYDTGALLLGLGTFAAIEGPVNTFLRAQKLFPGPHLYVGAGCVVAWAVSASLVPQMQKGNEVARTAHIVINFGMIGLFAWQIWTGIPIAQKVWEFTKFP 106
            G  R+ HY  G+++LGLGT  AIEGPVNTFLRAQKLFPGPHLY GAG VV WA++ASLVP M KGN+ AR +HI  N   +GLF WQ+ TG  I QKV +FTKFP
Sbjct:  168 GSFRETHYQVGSVVLGLGTAFAIEGPVNTFLRAQKLFPGPHLYAGAGVVVCWAMAASLVPLMTKGNDAARNSHIAFNVLALGLFTWQLPTGWEITQKVIQFTKFP 272

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BLAST of mRNA_H-elongata_contig85604.16147.1 vs. uniprot
Match: A0A7S2PXB9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PXB9_9STRA)

HSP 1 Score: 145 bits (365), Expect = 7.970e-43
Identity = 66/102 (64.71%), Postives = 78/102 (76.47%), Query Frame = 0

Query:    5 RDRHYDTGALLLGLGTFAAIEGPVNTFLRAQKLFPGPHLYVGAGCVVAWAVSASLVPQMQKGNEVARTAHIVINFGMIGLFAWQIWTGIPIAQKVWEFTKFP 106
            RD+H+  GALL  +GT  AIEGP+NT+ RA KLFPGPHLY GAG VV WA++AS+VP MQKGN+ ART HI  N   IGLF WQ+ +GIPI  KV EFTK+P
Sbjct:   21 RDKHFSQGALLAFIGTAFAIEGPLNTYARAGKLFPGPHLYAGAGLVVLWALAASMVPAMQKGNDAARTVHIGANLAGIGLFGWQVTSGIPILLKVVEFTKWP 122

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BLAST of mRNA_H-elongata_contig85604.16147.1 vs. uniprot
Match: A0A7S0L7U3_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L7U3_9EUKA)

HSP 1 Score: 149 bits (377), Expect = 2.300e-42
Identity = 68/103 (66.02%), Postives = 81/103 (78.64%), Query Frame = 0

Query:    4 VRDRHYDTGALLLGLGTFAAIEGPVNTFLRAQKLFPGPHLYVGAGCVVAWAVSASLVPQMQKGNEVARTAHIVINFGMIGLFAWQIWTGIPIAQKVWEFTKFP 106
            +RD+HY  G+++LGLGT  AIEGPVNTF+RAQKLFPGPHLY GAG VV+WA++ASLVP M KG E AR AHI  N   +GLF WQ+ TG  I QKV +FT+FP
Sbjct:  206 LRDKHYQVGSVILGLGTSFAIEGPVNTFIRAQKLFPGPHLYAGAGVVVSWAMAASLVPLMSKGKESARAAHIAFNVLALGLFTWQLPTGWEITQKVIKFTQFP 308

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BLAST of mRNA_H-elongata_contig85604.16147.1 vs. uniprot
Match: A0A7S0P6S8_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P6S8_9EUKA)

HSP 1 Score: 148 bits (374), Expect = 3.400e-42
Identity = 69/103 (66.99%), Postives = 80/103 (77.67%), Query Frame = 0

Query:    4 VRDRHYDTGALLLGLGTFAAIEGPVNTFLRAQKLFPGPHLYVGAGCVVAWAVSASLVPQMQKGNEVARTAHIVINFGMIGLFAWQIWTGIPIAQKVWEFTKFP 106
            +RD+HY  G+++LGLGT  AIEGPVNTFLRAQKLFPGPHLY GAG VV+WA++ASLVP M KG E AR AHI  N   +GLF WQ+ TG  I  KV +FTKFP
Sbjct:  180 LRDKHYQVGSVILGLGTSFAIEGPVNTFLRAQKLFPGPHLYAGAGVVVSWAMAASLVPLMSKGKESARIAHIAFNSLALGLFTWQLPTGWEITLKVIKFTKFP 282

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BLAST of mRNA_H-elongata_contig85604.16147.1 vs. uniprot
Match: K0SPQ1_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SPQ1_THAOC)

HSP 1 Score: 149 bits (375), Expect = 3.500e-42
Identity = 68/102 (66.67%), Postives = 82/102 (80.39%), Query Frame = 0

Query:    5 RDRHYDTGALLLGLGTFAAIEGPVNTFLRAQKLFPGPHLYVGAGCVVAWAVSASLVPQMQKGNEVARTAHIVINFGMIGLFAWQIWTGIPIAQKVWEFTKFP 106
            RD+H++ G+ LL LGTF AIEGP+NT+ RA KLFPGPHLY GAGCVV WA++AS VP MQKG++ ARTAHI  N   +GLFAWQI +GIPI  KV +FTK+P
Sbjct:  196 RDKHFNQGSTLLFLGTFFAIEGPLNTYARAGKLFPGPHLYAGAGCVVLWALAASCVPAMQKGDDTARTAHIGANILGLGLFAWQIQSGIPILLKVIQFTKWP 297

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BLAST of mRNA_H-elongata_contig85604.16147.1 vs. uniprot
Match: A0A7S3TGQ0_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TGQ0_9SPIT)

HSP 1 Score: 147 bits (372), Expect = 5.820e-42
Identity = 67/103 (65.05%), Postives = 80/103 (77.67%), Query Frame = 0

Query:    4 VRDRHYDTGALLLGLGTFAAIEGPVNTFLRAQKLFPGPHLYVGAGCVVAWAVSASLVPQMQKGNEVARTAHIVINFGMIGLFAWQIWTGIPIAQKVWEFTKFP 106
            +R++HY  G+++LGLGT  AIEGPVNTFLRAQKLFPGPHLY GAG VV WA++ASLVP MQKG + AR+ HI  N   + LF WQ+ TG  I QKV +FTKFP
Sbjct:  173 LREKHYQVGSVILGLGTAFAIEGPVNTFLRAQKLFPGPHLYAGAGVVVCWAMAASLVPLMQKGKDSARSEHIAFNAIAVALFTWQVPTGWEITQKVIQFTKFP 275

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BLAST of mRNA_H-elongata_contig85604.16147.1 vs. uniprot
Match: R1CWY1_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CWY1_EMIHU)

HSP 1 Score: 147 bits (371), Expect = 6.870e-42
Identity = 68/103 (66.02%), Postives = 79/103 (76.70%), Query Frame = 0

Query:    4 VRDRHYDTGALLLGLGTFAAIEGPVNTFLRAQKLFPGPHLYVGAGCVVAWAVSASLVPQMQKGNEVARTAHIVINFGMIGLFAWQIWTGIPIAQKVWEFTKFP 106
            +R +HY  G+++LGLGT  AIEGPVNTFLRAQKLFPGPHLY GAG VV WA++ASLVP M KG + ARTAHI  N   +GLF WQ+ TG  I  KV +FTKFP
Sbjct:  167 LRAKHYQVGSVILGLGTAFAIEGPVNTFLRAQKLFPGPHLYAGAGVVVCWAMAASLVPLMSKGKDAARTAHIAFNVLALGLFTWQLPTGWDITLKVIKFTKFP 269

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BLAST of mRNA_H-elongata_contig85604.16147.1 vs. uniprot
Match: I0Z2R7_COCSC (Uncharacterized protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z2R7_COCSC)

HSP 1 Score: 145 bits (365), Expect = 1.140e-41
Identity = 64/106 (60.38%), Postives = 78/106 (73.58%), Query Frame = 0

Query:    1 RGQVRDRHYDTGALLLGLGTFAAIEGPVNTFLRAQKLFPGPHLYVGAGCVVAWAVSASLVPQMQKGNEVARTAHIVINFGMIGLFAWQIWTGIPIAQKVWEFTKFP 106
            +G  RD+H++ G+LLLGLG   AIEGPVNT+LR  KLFPGPHLY GA  VV WA +++LVP MQKGN+ AR  HI +N   + LFAWQ+ TG  I QKVWEF  +P
Sbjct:  106 KGGYRDKHWNWGSLLLGLGVLIAIEGPVNTYLRTGKLFPGPHLYAGAAIVVLWASASALVPSMQKGNDTARNTHIALNTLNLALFAWQVPTGFEIVQKVWEFAPWP 211

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig85604.16147.1 vs. uniprot

BLAST of mRNA_H-elongata_contig85604.16147.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JF91_9PHAE	1.440e-57	83.50	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835YJX9_9STRA	1.410e-48	71.84	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A0M0JWP2_9EUKA	3.280e-43	65.71	Uncharacterized protein n=1 Tax=Chrysochromulina t...	[more]
A0A7S2PXB9_9STRA	7.970e-43	64.71	Hypothetical protein n=1 Tax=Skeletonema marinoi T...	[more]
A0A7S0L7U3_9EUKA	2.300e-42	66.02	Hypothetical protein n=1 Tax=Coccolithus braarudii...	[more]
A0A7S0P6S8_9EUKA	3.400e-42	66.99	Hypothetical protein n=1 Tax=Calcidiscus leptoporu...	[more]
K0SPQ1_THAOC	3.500e-42	66.67	Uncharacterized protein n=1 Tax=Thalassiosira ocea...	[more]
A0A7S3TGQ0_9SPIT	5.820e-42	65.05	Hypothetical protein (Fragment) n=1 Tax=Strombidin...	[more]
R1CWY1_EMIHU	6.870e-42	66.02	Uncharacterized protein n=1 Tax=Emiliania huxleyi ...	[more]
I0Z2R7_COCSC	1.140e-41	60.38	Uncharacterized protein n=1 Tax=Coccomyxa subellip...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025067	Protein of unknown function DUF4079	PFAM	PF13301	DUF4079	coord: 2..99 e-value: 2.3E-38 score: 131.5
None	No IPR available	PANTHER	PTHR34679	FAMILY NOT NAMED	coord: 1..106
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..11
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 32..42
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 72..90
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 61..71
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 91..106
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..31
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 43..60
None	No IPR available	TMHMM	TMhelix		coord: 42..61
None	No IPR available	TMHMM	TMhelix		coord: 74..96
None	No IPR available	TMHMM	TMhelix		coord: 13..32

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig85604	contig	H-elongata_contig85604:677..1456 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig85604.16147.1	mRNA_H-elongata_contig85604.16147.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig85604 677..1456 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig85604.16147.1 ID=prot_H-elongata_contig85604.16147.1|Name=mRNA_H-elongata_contig85604.16147.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=107bp
RGQVRDRHYDTGALLLGLGTFAAIEGPVNTFLRAQKLFPGPHLYVGAGCV
VAWAVSASLVPQMQKGNEVARTAHIVINFGMIGLFAWQIWTGIPIAQKVW
EFTKFP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR025067	DUF4079