prot_H-elongata_contig85270.16119.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig85270.16119.1
Unique Nameprot_H-elongata_contig85270.16119.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length64
Homology
BLAST of mRNA_H-elongata_contig85270.16119.1 vs. uniprot
Match: A0A7S1GNY7_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GNY7_CYCTE)

HSP 1 Score: 115 bits (287), Expect = 1.060e-31
Identity = 54/60 (90.00%), Postives = 58/60 (96.67%), Query Frame = 0
Query:    5 QEYFGVIPDVTTLGKVIGGGLPVGAYGGRKDIMELVAPAGPMYQAGTLSGNPLAMTAGIK 64
            QEYFG+ PDVTT+GKVIGGGLPVGAYGGR+DIME VAPAGPMYQAGTLSGNPLAMTAGI+
Sbjct:   38 QEYFGITPDVTTMGKVIGGGLPVGAYGGRRDIMETVAPAGPMYQAGTLSGNPLAMTAGIE 97          
BLAST of mRNA_H-elongata_contig85270.16119.1 vs. uniprot
Match: A0A7R9VXM4_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VXM4_9STRA)

HSP 1 Score: 115 bits (289), Expect = 2.300e-31
Identity = 54/60 (90.00%), Postives = 59/60 (98.33%), Query Frame = 0
Query:    5 QEYFGVIPDVTTLGKVIGGGLPVGAYGGRKDIMELVAPAGPMYQAGTLSGNPLAMTAGIK 64
            QEYFG+ PDVTT+GKVIGGGLPVGAYGGRK+IME+VAPAGPMYQAGTLSGNPLAMTAGI+
Sbjct:    1 QEYFGITPDVTTMGKVIGGGLPVGAYGGRKEIMEMVAPAGPMYQAGTLSGNPLAMTAGIE 60          
BLAST of mRNA_H-elongata_contig85270.16119.1 vs. uniprot
Match: B7FL36_MEDTR (Uncharacterized protein n=1 Tax=Medicago truncatula TaxID=3880 RepID=B7FL36_MEDTR)

HSP 1 Score: 115 bits (287), Expect = 6.210e-31
Identity = 53/60 (88.33%), Postives = 58/60 (96.67%), Query Frame = 0
Query:    5 QEYFGVIPDVTTLGKVIGGGLPVGAYGGRKDIMELVAPAGPMYQAGTLSGNPLAMTAGIK 64
            QEYFG+ PD+TTLGK+IGGGLPVGAYGGR+DIME VAPAGPMYQAGTLSGNPLAMTAGI+
Sbjct:   12 QEYFGITPDITTLGKIIGGGLPVGAYGGRRDIMETVAPAGPMYQAGTLSGNPLAMTAGIE 71          
BLAST of mRNA_H-elongata_contig85270.16119.1 vs. uniprot
Match: A0A0K9NKH7_ZOSMR (Glutamate-1-semialdehyde 2,1-aminomutase, C-terminal part n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9NKH7_ZOSMR)

HSP 1 Score: 115 bits (287), Expect = 1.130e-30
Identity = 52/59 (88.14%), Postives = 58/59 (98.31%), Query Frame = 0
Query:    5 QEYFGVIPDVTTLGKVIGGGLPVGAYGGRKDIMELVAPAGPMYQAGTLSGNPLAMTAGI 63
            QEYFG+ PD+TT+GK+IGGGLPVGAYGGR+DIME+VAPAGPMYQAGTLSGNPLAMTAGI
Sbjct:   35 QEYFGITPDITTMGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGI 93          
BLAST of mRNA_H-elongata_contig85270.16119.1 vs. uniprot
Match: A0A0A9CNE8_ARUDO (Uncharacterized protein n=3 Tax=Arundo donax TaxID=35708 RepID=A0A0A9CNE8_ARUDO)

HSP 1 Score: 114 bits (285), Expect = 1.250e-30
Identity = 53/59 (89.83%), Postives = 58/59 (98.31%), Query Frame = 0
Query:    5 QEYFGVIPDVTTLGKVIGGGLPVGAYGGRKDIMELVAPAGPMYQAGTLSGNPLAMTAGI 63
            QE+FG+ PDVTTLGK+IGGGLPVGAYGGR+DIME+VAPAGPMYQAGTLSGNPLAMTAGI
Sbjct:   12 QEHFGITPDVTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGI 70          
BLAST of mRNA_H-elongata_contig85270.16119.1 vs. uniprot
Match: A0A7R9YGA8_9STRA (Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YGA8_9STRA)

HSP 1 Score: 119 bits (298), Expect = 2.420e-30
Identity = 57/60 (95.00%), Postives = 59/60 (98.33%), Query Frame = 0
Query:    5 QEYFGVIPDVTTLGKVIGGGLPVGAYGGRKDIMELVAPAGPMYQAGTLSGNPLAMTAGIK 64
            QEYFGV PDVTT+GKVIGGGLPVGAYGGRKDIME+VAPAGPMYQAGTLSGNPLAMTAGIK
Sbjct:  288 QEYFGVTPDVTTMGKVIGGGLPVGAYGGRKDIMEMVAPAGPMYQAGTLSGNPLAMTAGIK 347          
BLAST of mRNA_H-elongata_contig85270.16119.1 vs. uniprot
Match: A0A7S3TAB5_9SPIT (Hypothetical protein n=2 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TAB5_9SPIT)

HSP 1 Score: 113 bits (282), Expect = 2.570e-30
Identity = 54/59 (91.53%), Postives = 57/59 (96.61%), Query Frame = 0
Query:    6 EYFGVIPDVTTLGKVIGGGLPVGAYGGRKDIMELVAPAGPMYQAGTLSGNPLAMTAGIK 64
            EYFGV PDVTT+GKVIGGGLPVGAYGGR+DIME VAPAGPMYQAGTLSGNPLAMTAGI+
Sbjct:    1 EYFGVTPDVTTMGKVIGGGLPVGAYGGRRDIMETVAPAGPMYQAGTLSGNPLAMTAGIE 59          
BLAST of mRNA_H-elongata_contig85270.16119.1 vs. uniprot
Match: A0A7S0CAV4_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CAV4_9STRA)

HSP 1 Score: 116 bits (291), Expect = 2.790e-30
Identity = 55/60 (91.67%), Postives = 59/60 (98.33%), Query Frame = 0
Query:    5 QEYFGVIPDVTTLGKVIGGGLPVGAYGGRKDIMELVAPAGPMYQAGTLSGNPLAMTAGIK 64
            QEYFGV PDVTT+GKVIGGGLPVGAYGGR+DIME+VAPAGPMYQAGTLSGNPLAMTAGI+
Sbjct:  137 QEYFGVTPDVTTMGKVIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIE 196          
BLAST of mRNA_H-elongata_contig85270.16119.1 vs. uniprot
Match: A0A088C915_9POAL (Glutamate-1-semialdehyde 2,1-aminomutase (Fragment) n=2 Tax=Phyllostachys TaxID=15747 RepID=A0A088C915_9POAL)

HSP 1 Score: 117 bits (293), Expect = 4.390e-30
Identity = 55/59 (93.22%), Postives = 58/59 (98.31%), Query Frame = 0
Query:    5 QEYFGVIPDVTTLGKVIGGGLPVGAYGGRKDIMELVAPAGPMYQAGTLSGNPLAMTAGI 63
            QEYFG+ PDVTTLGK+IGGGLPVGAYGGRKDIME+VAPAGPMYQAGTLSGNPLAMTAGI
Sbjct:  296 QEYFGITPDVTTLGKIIGGGLPVGAYGGRKDIMEMVAPAGPMYQAGTLSGNPLAMTAGI 354          
BLAST of mRNA_H-elongata_contig85270.16119.1 vs. uniprot
Match: A0A7S0B0S7_9STRA (Glutamate-1-semialdehyde 2,1-aminomutase (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0B0S7_9STRA)

HSP 1 Score: 117 bits (293), Expect = 5.930e-30
Identity = 55/60 (91.67%), Postives = 59/60 (98.33%), Query Frame = 0
Query:    5 QEYFGVIPDVTTLGKVIGGGLPVGAYGGRKDIMELVAPAGPMYQAGTLSGNPLAMTAGIK 64
            QEYFGV PD+TT+GKVIGGGLPVGAYGGRKDIME+VAPAGPMYQAGTLSGNPLAMTAGI+
Sbjct:  238 QEYFGVTPDITTMGKVIGGGLPVGAYGGRKDIMEMVAPAGPMYQAGTLSGNPLAMTAGIE 297          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig85270.16119.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1GNY7_CYCTE1.060e-3190.00Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A7R9VXM4_9STRA2.300e-3190.00Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
B7FL36_MEDTR6.210e-3188.33Uncharacterized protein n=1 Tax=Medicago truncatul... [more]
A0A0K9NKH7_ZOSMR1.130e-3088.14Glutamate-1-semialdehyde 2,1-aminomutase, C-termin... [more]
A0A0A9CNE8_ARUDO1.250e-3089.83Uncharacterized protein n=3 Tax=Arundo donax TaxID... [more]
A0A7R9YGA8_9STRA2.420e-3095.00Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=P... [more]
A0A7S3TAB5_9SPIT2.570e-3091.53Hypothetical protein n=2 Tax=Strombidinopsis acumi... [more]
A0A7S0CAV4_9STRA2.790e-3091.67Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A088C915_9POAL4.390e-3093.22Glutamate-1-semialdehyde 2,1-aminomutase (Fragment... [more]
A0A7S0B0S7_9STRA5.930e-3091.67Glutamate-1-semialdehyde 2,1-aminomutase (Fragment... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005814Aminotransferase class-IIIPFAMPF00202Aminotran_3coord: 6..62
e-value: 4.6E-12
score: 45.3
IPR015421Pyridoxal phosphate-dependent transferase, major domainGENE3D3.40.640.10coord: 4..63
e-value: 1.6E-19
score: 72.0
NoneNo IPR availablePANTHERPTHR43713FAMILY NOT NAMEDcoord: 4..64
NoneNo IPR availablePANTHERPTHR43713:SF5GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE 1, CHLOROPLASTIC-RELATEDcoord: 4..64
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 5..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig85270contigH-elongata_contig85270:444..1298 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig85270.16119.1mRNA_H-elongata_contig85270.16119.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig85270 444..1298 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig85270.16119.1 ID=prot_H-elongata_contig85270.16119.1|Name=mRNA_H-elongata_contig85270.16119.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=64bp
MSIRQEYFGVIPDVTTLGKVIGGGLPVGAYGGRKDIMELVAPAGPMYQAG
TLSGNPLAMTAGIK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005814Aminotrans_3
IPR015421PyrdxlP-dep_Trfase_major
IPR015424PyrdxlP-dep_Trfase