prot_H-elongata_contig84850.16084.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig84850.16084.1
Unique Nameprot_H-elongata_contig84850.16084.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length86
Homology
BLAST of mRNA_H-elongata_contig84850.16084.1 vs. uniprot
Match: D7FXS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXS4_ECTSI)

HSP 1 Score: 134 bits (337), Expect = 5.660e-35
Identity = 66/83 (79.52%), Postives = 75/83 (90.36%), Query Frame = 0
Query:    4 EEQLLEITNIWLNVGMTVLCVFCAGLAAGLTMGLISIGPLEMAIKQRSGTPKEQRQASRILPLVSRHHFLLVTLLLFNSMANE 86
            EE  L+I + W+N+ MT +CV CAGLAAGLTMGL+SI PLEMAIKQRSGTP+EQ+QASRILPLVSRHHFLLVTLLLFNS+ANE
Sbjct:  197 EEDFLQIESTWVNIAMTSVCVVCAGLAAGLTMGLLSIEPLEMAIKQRSGTPEEQQQASRILPLVSRHHFLLVTLLLFNSLANE 279          
BLAST of mRNA_H-elongata_contig84850.16084.1 vs. uniprot
Match: A0A6H5KPI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPI7_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 1.370e-34
Identity = 66/83 (79.52%), Postives = 74/83 (89.16%), Query Frame = 0
Query:    4 EEQLLEITNIWLNVGMTVLCVFCAGLAAGLTMGLISIGPLEMAIKQRSGTPKEQRQASRILPLVSRHHFLLVTLLLFNSMANE 86
            EE  L+I + W+N+ MT +CV CAGLAAGLTMGL+SI PLEMAIKQRSGTP+EQ QASRILPLVSRHHFLLVTLLLFNS+ANE
Sbjct:  194 EEDFLQIESTWVNIAMTSVCVVCAGLAAGLTMGLLSIEPLEMAIKQRSGTPEEQHQASRILPLVSRHHFLLVTLLLFNSLANE 276          
BLAST of mRNA_H-elongata_contig84850.16084.1 vs. uniprot
Match: A0A835ZJ67_9STRA (CNNM transmembrane domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ67_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.740e-23
Identity = 54/83 (65.06%), Postives = 65/83 (78.31%), Query Frame = 0
Query:    4 EEQLLEITNIWLNVGMTVLCVFCAGLAAGLTMGLISIGPLEMAIKQRSGTPKEQRQASRILPLVSRHHFLLVTLLLFNSMANE 86
            E   L+I  +  N+   ++ + CAGLAAGLT GL+SI PLEMAIKQRSGT  E+RQA RILP++SRHH LLVTLLLFNS+ANE
Sbjct:  188 EGDALKIEGLVPNLICILVLITCAGLAAGLTTGLLSIEPLEMAIKQRSGTVDEKRQARRILPIISRHHLLLVTLLLFNSLANE 270          
BLAST of mRNA_H-elongata_contig84850.16084.1 vs. uniprot
Match: W7SYW4_9STRA (CNNM transmembrane domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7SYW4_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 1.690e-22
Identity = 47/72 (65.28%), Postives = 59/72 (81.94%), Query Frame = 0
Query:   15 LNVGMTVLCVFCAGLAAGLTMGLISIGPLEMAIKQRSGTPKEQRQASRILPLVSRHHFLLVTLLLFNSMANE 86
            LN+  + +CV CA +AAGLT+GL+SI PLE+ IKQR GT +E RQAS +LPL+ RHH+LLVTLLL+NS ANE
Sbjct:  191 LNLTFSFICVLCAAIAAGLTIGLMSIDPLELEIKQRVGTAEECRQASVVLPLIQRHHYLLVTLLLYNSAANE 262          
BLAST of mRNA_H-elongata_contig84850.16084.1 vs. uniprot
Match: A0A4D9CY62_9STRA (Uncharacterized protein ycf23 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CY62_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 1.860e-21
Identity = 47/72 (65.28%), Postives = 59/72 (81.94%), Query Frame = 0
Query:   15 LNVGMTVLCVFCAGLAAGLTMGLISIGPLEMAIKQRSGTPKEQRQASRILPLVSRHHFLLVTLLLFNSMANE 86
            LN+  + +CV CA +AAGLT+GL+SI PLE+ IKQR GT +E RQAS +LPL+ RHH+LLVTLLL+NS ANE
Sbjct:  190 LNLTFSFICVLCAAIAAGLTIGLMSIDPLELEIKQRVGTAEECRQASVVLPLIQRHHYLLVTLLLYNSAANE 261          
BLAST of mRNA_H-elongata_contig84850.16084.1 vs. uniprot
Match: W7TKN6_9STRA (Protein mam3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKN6_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 1.540e-20
Identity = 43/73 (58.90%), Postives = 58/73 (79.45%), Query Frame = 0
Query:   14 WLNVGMTVLCVFCAGLAAGLTMGLISIGPLEMAIKQRSGTPKEQRQASRILPLVSRHHFLLVTLLLFNSMANE 86
            W  +G  V+CV CA  AAGLT+GL+S+ PLE+ +K+R GTP+E++ A +I PL++ HH LLVTLLLFNS+ANE
Sbjct:   19 WYQLGGAVVCVICAAFAAGLTVGLMSLDPLELEVKRRVGTPEERKHAEKICPLIAPHHRLLVTLLLFNSIANE 91          
BLAST of mRNA_H-elongata_contig84850.16084.1 vs. uniprot
Match: A0A482RNV2_9ARCH (DUF21 domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RNV2_9ARCH)

HSP 1 Score: 86.7 bits (213), Expect = 9.410e-19
Identity = 44/78 (56.41%), Postives = 58/78 (74.36%), Query Frame = 0
Query:    9 EITNIWLNVGMTVLCVFCAGLAAGLTMGLISIGPLEMAIKQRSGTPKEQRQASRILPLVSRHHFLLVTLLLFNSMANE 86
            E+ +I+ N  M  LCV CAGLAAGLTMGL+S+   ++ IK  +GT +E+  A  ILP+V +HH LLVTLLLFN++ANE
Sbjct:   20 EMEDIY-NASMAALCVICAGLAAGLTMGLLSLDVTKLEIKTMTGTAEEKLAAKSILPIVQQHHLLLVTLLLFNAIANE 96          
BLAST of mRNA_H-elongata_contig84850.16084.1 vs. uniprot
Match: K8YX85_NANGC (CNNM transmembrane domain-containing protein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YX85_NANGC)

HSP 1 Score: 85.5 bits (210), Expect = 4.250e-18
Identity = 41/73 (56.16%), Postives = 58/73 (79.45%), Query Frame = 0
Query:   14 WLNVGMTVLCVFCAGLAAGLTMGLISIGPLEMAIKQRSGTPKEQRQASRILPLVSRHHFLLVTLLLFNSMANE 86
            ++N+G+ ++CV  A LA+GLT+GL+SI  L++ IKQR+GTP ++  A+ ILPL++  H LLVTLLLFNSMA E
Sbjct:  172 FVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAE 244          
BLAST of mRNA_H-elongata_contig84850.16084.1 vs. uniprot
Match: A0A7S3M3H8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M3H8_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 5.960e-18
Identity = 42/75 (56.00%), Postives = 56/75 (74.67%), Query Frame = 0
Query:   12 NIWLNVGMTVLCVFCAGLAAGLTMGLISIGPLEMAIKQRSGTPKEQRQASRILPLVSRHHFLLVTLLLFNSMANE 86
            N + N  M  +CV CAGLAAGLTMG++S+   ++ IK R GT +E+  AS +LP++ +HH LLVTLLLFNS+ANE
Sbjct:   34 NDFFNSFMAGVCVLCAGLAAGLTMGMLSLDATKLEIKTRVGTEQEKLDASAVLPIIRKHHLLLVTLLLFNSIANE 108          
BLAST of mRNA_H-elongata_contig84850.16084.1 vs. uniprot
Match: F0YEA8_AURAN (CNNM transmembrane domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEA8_AURAN)

HSP 1 Score: 85.1 bits (209), Expect = 7.270e-18
Identity = 42/74 (56.76%), Postives = 56/74 (75.68%), Query Frame = 0
Query:   15 LNVGMTVLCVFCAGLAAGLTMGLISIGPLEMAIKQRSGTPKEQRQASRILPLVSR--HHFLLVTLLLFNSMANE 86
            L++ +T  C+ CA LAAGLTMG++S+ PL++ +K R+GT  EQ  A+R+LPLV R  HH +LVTLLL NS ANE
Sbjct:   11 LDLALTATCIICAALAAGLTMGVVSLDPLDLRVKMRTGTKSEQACAARLLPLVDRRPHHQVLVTLLLLNSCANE 84          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig84850.16084.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXS4_ECTSI5.660e-3579.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KPI7_9PHAE1.370e-3479.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZJ67_9STRA1.740e-2365.06CNNM transmembrane domain-containing protein n=1 T... [more]
W7SYW4_9STRA1.690e-2265.28CNNM transmembrane domain-containing protein n=1 T... [more]
A0A4D9CY62_9STRA1.860e-2165.28Uncharacterized protein ycf23 n=1 Tax=Nannochlorop... [more]
W7TKN6_9STRA1.540e-2058.90Protein mam3 n=2 Tax=Monodopsidaceae TaxID=425072 ... [more]
A0A482RNV2_9ARCH9.410e-1956.41DUF21 domain-containing protein (Fragment) n=1 Tax... [more]
K8YX85_NANGC4.250e-1856.16CNNM transmembrane domain-containing protein n=3 T... [more]
A0A7S3M3H8_9STRA5.960e-1856.00Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
F0YEA8_AURAN7.270e-1856.76CNNM transmembrane domain-containing protein n=1 T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002550CNNM, transmembrane domainPFAMPF01595DUF21coord: 19..85
e-value: 7.5E-10
score: 38.8
IPR002550CNNM, transmembrane domainPROSITEPS51846CNNMcoord: 9..86
score: 15.121
NoneNo IPR availablePANTHERPTHR12064ANCIENT CONSERVED DOMAIN PROTEIN-RELATEDcoord: 14..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 63..84
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..12
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 44..62
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 85..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 13..43
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig84850contigH-elongata_contig84850:1681..2575 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig84850.16084.1mRNA_H-elongata_contig84850.16084.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig84850 1681..2575 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig84850.16084.1 ID=prot_H-elongata_contig84850.16084.1|Name=mRNA_H-elongata_contig84850.16084.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=86bp
LEEEEQLLEITNIWLNVGMTVLCVFCAGLAAGLTMGLISIGPLEMAIKQR
SGTPKEQRQASRILPLVSRHHFLLVTLLLFNSMANE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002550CNNM