prot_H-elongata_contig8442.16056.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8442.16056.1
Unique Nameprot_H-elongata_contig8442.16056.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length253
Homology
BLAST of mRNA_H-elongata_contig8442.16056.1 vs. uniprot
Match: D8LJ44_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ44_ECTSI)

HSP 1 Score: 228 bits (580), Expect = 1.290e-69
Identity = 128/256 (50.00%), Postives = 156/256 (60.94%), Query Frame = 0
Query:    1 MGMVKFINNSVLIKQLDPVTCGEGCTTIGRGLSYVTKKGGAVHNKGNVTFQGDASFLVCYSQTDDTEERSKGGAISNNAPGVIYFMGDLTMKGNEVE---VRQXXXXXXXXXXXXXXDDIFYTNDASDGGGIYQEKWGTFEINGMINFTNNDAFQSRGGAICNVGGVVNINGGSVFHNNGASCSGKCGYGGAIYNSDRGAITLTGSSTFSENGAWYGGAIYSNSIASYDDGETVAENLLHLITFPDDTVFINNTAE 253
            MG  +F +NSV +KQL  V+CG+GC   GRGLSYV KKGGA+HNKG +TF+GDA+F      T+D+ E+ K GAISN   G I+F   LTMK NE E                    + +F  N ASDGGGIYQ   G    N M  F+ N A++ RGG + N GGVVNIN GS+F  NGAS SG  G GGAIYN + GA+TL GS+TF EN A+ GGAIY+      DDG         + TFPDDTVF +N A+
Sbjct:  116 MGTSEFSDNSVAVKQLGAVSCGDGCERTGRGLSYVVKKGGAIHNKGTLTFEGDATFERNAVHTEDSVEQGKAGAISNTGSGTIWFKSKLTMKDNEAEGFFEGLGGAIYNRGEIIVDGESLFSLNTASDGGGIYQTPIGKMTFNSMATFSENSAYELRGGGLMNYGGVVNINAGSLFELNGASGSGDGGLGGAIYNGNEGAVTLMGSTTFRENAAYEGGAIYT------DDGSVANGEAASVTTFPDDTVFEDNRAD 365          
BLAST of mRNA_H-elongata_contig8442.16056.1 vs. uniprot
Match: D7FLJ6_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ6_ECTSI)

HSP 1 Score: 226 bits (575), Expect = 7.260e-69
Identity = 126/256 (49.22%), Postives = 159/256 (62.11%), Query Frame = 0
Query:    1 MGMVKFINNSVLIKQLDPVTCGEGCTTIGRGLSYVTKKGGAVHNKGNVTFQGDASFLVCYSQTDDTEERSKGGAISNNAPGVIYFMGDLTMKGNEVE---VRQXXXXXXXXXXXXXXDDIFYTNDASDGGGIYQEKWGTFEINGMINFTNNDAFQSRGGAICNVGGVVNINGGSVFHNNGASCSGKCGYGGAIYNSDRGAITLTGSSTFSENGAWYGGAIYSNSIASYDDGETVAENLLHLITFPDDTVFINNTAE 253
            MG  +F +NSV +KQ+ PV+CG+GCT IGRGLSY+ KKGGA+HNKG +TF+GDA+F      T+D+ E+ K GAISN   G I F   LTMK NE +                    + +F  N +SDGGGIYQ   GT   NG   F+ N A+   GG + N GGVVNIN GS+F  NGAS SG  G GGAIYN++ G +TL GS+TF EN A+ GGAIY++      DG+        + TFPDDTVF +N+AE
Sbjct:  116 MGTSEFSDNSVAVKQIGPVSCGDGCTRIGRGLSYIVKKGGAIHNKGTLTFEGDATFERNEVHTEDSVEQGKAGAISNTGSGTILFKSKLTMKDNEADGFFEGIGGAIYNRGEIVVEGESLFSLNTSSDGGGIYQTSIGTMTFNGAATFSENSAYDLLGGGLMNDGGVVNINAGSLFELNGASGSGDGGLGGAIYNTNAGVVTLMGSTTFRENAAFMGGAIYTS------DGDEENGEPASVTTFPDDTVFEDNSAE 365          
BLAST of mRNA_H-elongata_contig8442.16056.1 vs. uniprot
Match: D7FL58_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL58_ECTSI)

HSP 1 Score: 171 bits (434), Expect = 3.770e-49
Identity = 103/256 (40.23%), Postives = 135/256 (52.73%), Query Frame = 0
Query:    1 MGMVKFINNSVLIKQLDPVTCGEGCTTIGRGLSYVTKKGGAVHNKGNVTFQGDASFLVCYSQTDDTEERSKGGAISNNAPGVIYFMGDLTMKGNEVEVRQXXXXXXXXXXXXXXDD---IFYTNDASDGGGIYQEKWGTFEINGMINFTNNDAFQSRGGAICNVGGVVNINGGSVFHNNGASCSGKCGYGGAIYNSDRGAITLTGSSTFSENGAWYGGAIYSNSIASYDDGETVAENLLHLITFPDDTVFINNTAE 253
            MG  +F NNSV +KQ   ++CG+GCT   RGL+Y+ KKGGA+HNKG +TF GDA+F    + T+ + +R  GGAISN   G I F   LTMK N+ +                  +   +F  N A+ GGGI+Q   GT   NGM  F+ N A +  GG + N GGVVNIN GS+F +N AS SG  G+GGAI+N+                   +GGAIY+N           A+    + TFPDD       AE
Sbjct:    1 MGTSEFSNNSVAVKQFGRISCGDGCTRSERGLTYIVKKGGAIHNKGTLTFDGDATFERNVAHTESSNQRGNGGAISNTGSGTILFKSKLTMKDNQADANFAGLGGAIYNRGEIIVEGASLFSLNHAAAGGGIHQTSIGTMTFNGMATFSENFAGEPTGGGLTNNGGVVNINAGSLFEHNWASASGDGGFGGAIFNTKXXXXXXXXXXXXXXXXXHWGGAIYTND----------ADGPGSVTTFPDDXXXXXXRAE 246          
BLAST of mRNA_H-elongata_contig8442.16056.1 vs. uniprot
Match: D7FQG1_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG1_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 1.430e-28
Identity = 73/173 (42.20%), Postives = 95/173 (54.91%), Query Frame = 0
Query:   81 GVIYFMGDLTMKGNEVEVRQXXXXXXXXXXXXXXDDIFYTNDASDGGGIYQEKWGTFEINGMINFTNNDAFQSRGGAICNVGGVVNINGGSVFHNNGASCSGKCGYGGAIYNSDRGAITLTGSSTFSENGAWYGGAIYSNSIASYDDGETVAENLLHLITFPDDTVFINNTAE 253
            G IY  G++T++G                       +F  N +SDGGGIYQ   G    N M  F +N A   RGG + N GGVVNIN GS+F  N A+ +   G GGAI+N + G +TL G +TF ENGAW+GGAIY+      DDG   +     + TFPDDTVF +N+A+
Sbjct:   15 GAIYNRGEITVEGES---------------------LFSENRSSDGGGIYQTSIGIMTFNSMATFFHNVAENLRGGGLMNDGGVVNINAGSLFEQNFAAANADGGRGGAIHNRNGGVVTLMGPTTFRENGAWWGGAIYT------DDGYPAS-----VTTFPDDTVFEDNSAD 155          
BLAST of mRNA_H-elongata_contig8442.16056.1 vs. uniprot
Match: A0A6H5KTD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD4_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 4.370e-27
Identity = 83/261 (31.80%), Postives = 126/261 (48.28%), Query Frame = 0
Query:    2 GMVKFINNSVLIKQLDPVTCGEGCTTIGRGLSYVTKKGGAVHNKGNVTFQGDASFLVCYSQTDDTEER-----SKGGAISNNAPGVIYFMGDLTMKGNEVEV----RQXXXXXXXXXXXXXXDDIFYTNDASDGGGIYQEKWGTFEINGMINFTNNDAFQSRGGAICNVGGVVNINGGSVFHNNGASCSGKCGYGGAIYNSDRGAITLTGSSTFSENGAWYGGAIYSNSIASYDDGETVAENLLHLITFPDDTVFINNTAE 253
            G  +F +NS++   +D  T  E           + +KGGA+H KG++TF+ DA+F      + +  +R       GGAIS +  G IYFMG LTM  NE +      Q              +  F  N    GG I+QEKW T   N  + FT+N    + GG I N+GG V  N GS+F +  A  SG  G              LTGS+TF +N   +GGA++++++ +          ++  I++P+DT+F +N A+
Sbjct:  119 GTAEFSDNSIISTSIDESTEEE-----------ILRKGGAIHTKGSLTFEKDATF------SGNLNDRLYYGSGPGGAISVHVKGSIYFMGKLTMTDNEADDYFGGAQGGAIFNRGDIVVDGEAEFTGNIGGRGGAIFQEKWATLVFNDFVTFTSNKCLDTFGGTIANIGGDVTANAGSLFFDGFAENSGDGGLXXXXXXXXXXXXXLTGSTTFRQNYGNWGGAVFNSAVPNAYFTAEDESYVMPTISYPEDTIFEDNDAQ 362          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8442.16056.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LJ44_ECTSI1.290e-6950.00Asn/thr-rich large protein family protein n=1 Tax=... [more]
D7FLJ6_ECTSI7.260e-6949.22Asn/thr-rich large protein family protein n=1 Tax=... [more]
D7FL58_ECTSI3.770e-4940.23Asn/thr-rich large protein family protein n=1 Tax=... [more]
D7FQG1_ECTSI1.430e-2842.20Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
A0A6H5KTD4_9PHAE4.370e-2731.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8442contigH-elongata_contig8442:6146..8854 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8442.16056.1mRNA_H-elongata_contig8442.16056.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8442 6146..8854 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8442.16056.1 ID=prot_H-elongata_contig8442.16056.1|Name=mRNA_H-elongata_contig8442.16056.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=253bp
MGMVKFINNSVLIKQLDPVTCGEGCTTIGRGLSYVTKKGGAVHNKGNVTF
QGDASFLVCYSQTDDTEERSKGGAISNNAPGVIYFMGDLTMKGNEVEVRQ
GGAIYNRGDIVVDGDDIFYTNDASDGGGIYQEKWGTFEINGMINFTNNDA
FQSRGGAICNVGGVVNINGGSVFHNNGASCSGKCGYGGAIYNSDRGAITL
TGSSTFSENGAWYGGAIYSNSIASYDDGETVAENLLHLITFPDDTVFINN
TAE
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