prot_H-elongata_contig84360.16049.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig84360.16049.1
Unique Name	prot_H-elongata_contig84360.16049.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	209

Homology

[Close]

BLAST of mRNA_H-elongata_contig84360.16049.1 vs. uniprot
Match: A0A6H5L192_9PHAE (HOOK domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L192_9PHAE)

HSP 1 Score: 232 bits (591), Expect = 6.880e-67
Identity = 131/205 (63.90%), Postives = 163/205 (79.51%), Query Frame = 0

Query:    1 QFEKYRETHTVDDDTYNKDADDWEHNLALQKKQIADLQRQLGELSKEKRRVEREKTYYWGQAEELRMQAAXXXXXXDSSKDADHAQLVEQTKELIEENRELRQRLQKESNCAGPGGISTRSGGRWGSSGVAAMRAEHESEVNALKEEKQDMLMKYHATAAKMHEQDRRCVELTEEKEEMQAQLVALQLTCERQKRKLENPAAAAA 205
            +F +YRETHTVDD +YN+D D WE ++A +KK I DLQ QL  L K+KR++EREKT+YWG+AEELRM AA      D S+DADH QLVEQT+ELIEENRELRQR Q   N  G G +STRSGGRWGSSGVAAMRAEHE+E+ ALKEEKQD+L+KYHAT+AK++E+ +RC EL  E EE +AQ V+LQL  +RQ++KL++  A +A
Sbjct:  860 EFARYRETHTVDDISYNQDVDQWEMSIATKKKMIGDLQGQLRALEKDKRKLEREKTFYWGRAEELRMSAAAGGRA-DPSRDADHLQLVEQTRELIEENRELRQRAQ--DNSDGGGAMSTRSGGRWGSSGVAAMRAEHEAEMTALKEEKQDLLLKYHATSAKLNEEQQRCAELNGEVEEARAQFVSLQLVNKRQEKKLQDSIATSA 1061

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig84360.16049.1 vs. uniprot

BLAST of mRNA_H-elongata_contig84360.16049.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5L192_9PHAE	6.880e-67	63.90	HOOK domain-containing protein n=2 Tax=Ectocarpus ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 84..111
None	No IPR available	COILS	Coil	Coil	coord: 162..196
None	No IPR available	COILS	Coil	Coil	coord: 20..54
None	No IPR available	COILS	Coil	Coil	coord: 134..154

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig84360	contig	H-elongata_contig84360:169..2182 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig84360.16049.1	mRNA_H-elongata_contig84360.16049.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig84360 169..2182 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig84360.16049.1 ID=prot_H-elongata_contig84360.16049.1|Name=mRNA_H-elongata_contig84360.16049.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=209bp
QFEKYRETHTVDDDTYNKDADDWEHNLALQKKQIADLQRQLGELSKEKRR
VEREKTYYWGQAEELRMQAAAGGGGGDSSKDADHAQLVEQTKELIEENRE
LRQRLQKESNCAGPGGISTRSGGRWGSSGVAAMRAEHESEVNALKEEKQD
MLMKYHATAAKMHEQDRRCVELTEEKEEMQAQLVALQLTCERQKRKLENP
AAAAAVAIP