prot_H-elongata_contig84310.16045.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig84310.16045.1
Unique Name	prot_H-elongata_contig84310.16045.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	152

Homology

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BLAST of mRNA_H-elongata_contig84310.16045.1 vs. uniprot
Match: D7G6C7_ECTSI (4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6C7_ECTSI)

HSP 1 Score: 236 bits (603), Expect = 8.860e-75
Identity = 117/148 (79.05%), Postives = 133/148 (89.86%), Query Frame = 0

Query:    1 VYLDKRIPPEAGLGGGSANAATALFAANELAGRPASLRDLQMWSAELGSDITFFLSTGTCYCTGRGEILHPQKPLPPTSVWLVKPSEGLSTRNVFSHLDYDQLSRVEPSKLLEQFTTQQGLVDAHFVNDLESPAFKAMPSLRQIKQEL 148
            VYL KRIPPEAGLGGGSANAATALFAAN+LAG PASL DLQ+WSAELGSDITFFLSTGTCYCTGRGE+LHPQ+PLP T VWLVKP++GLST  VF HLDYDQLSR+EP+ LL+QF  ++GL +A +VNDLE PAFKAMPSL+ +K+EL
Sbjct:  172 VYLSKRIPPEAGLGGGSANAATALFAANKLAGHPASLEDLQLWSAELGSDITFFLSTGTCYCTGRGEVLHPQEPLPQTRVWLVKPNKGLSTPVVFRHLDYDQLSRIEPAGLLKQFI-EEGLAEADYVNDLELPAFKAMPSLQTMKEEL 318

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BLAST of mRNA_H-elongata_contig84310.16045.1 vs. uniprot
Match: A0A7S3YEW3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEW3_HETAK)

HSP 1 Score: 190 bits (482), Expect = 5.550e-57
Identity = 96/151 (63.58%), Postives = 114/151 (75.50%), Query Frame = 0

Query:    1 VYLDKRIPPEAGLGGGSANAATALFAANELAGRPASLRDLQMWSAELGSDITFFLSTGTCYCTGRGEILHPQKPLPPTSVWLVKPSEGLSTRNVFSHLDYDQLSRVEPSKLLEQFTT--QQGLVDAHFVNDLESPAFKAMPSLRQIKQELK 149
            V LDKR+P + GLGGGS N ATA FAANEL G PA+L DL+ WSAELGSDITFF S GTCYCTGRGE+LHPQ PLPP+  +LVKP EGLST  VF +LDY  LS  +P ++L  FT    +GL  A +VNDLE PAFK MP+L ++K +L+
Sbjct:  186 VDLDKRVPAQGGLGGGSGNCATAFFAANELCGAPAALGDLEAWSAELGSDITFFFSRGTCYCTGRGEVLHPQAPLPPSVCYLVKPEEGLSTPLVFKNLDYALLSPADPEEVLATFTGGGDRGLYGATYVNDLEPPAFKVMPALAELKADLR 336

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BLAST of mRNA_H-elongata_contig84310.16045.1 vs. uniprot
Match: A0A835Z2M9_9STRA (4-diphosphocytidyl-2c-methyl-d-erythritol kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2M9_9STRA)

HSP 1 Score: 179 bits (454), Expect = 5.430e-53
Identity = 90/149 (60.40%), Postives = 114/149 (76.51%), Query Frame = 0

Query:    1 VYLDKRIPPEAGLGGGSANAATALFAANELAGRPASLRDLQMWSAELGSDITFFLSTGTCYCTGRGEILHPQKPLPP-TSVWLVKPSEGLSTRNVFSHLDYDQLSRVEPSKLLEQFTTQQGLVDAHFVNDLESPAFKAMPSLRQIKQEL 148
            V+LDK IP +AG+GGGS +AAT LFAANEL G PA+   L  WS +LGSDITFFLS+GTCYCTGRGE+LHPQ  +     VWL+KP EGLST  VF HLDY++LS  +P +LL+ F   +G+  A ++NDLE PAFKA+P L+Q+KQ++
Sbjct:  109 VHLDKLIPAQAGMGGGSGDAATTLFAANELTGCPATPEQLVAWSGDLGSDITFFLSSGTCYCTGRGEVLHPQPNIQAYKKVWLIKPEEGLSTPMVFKHLDYNELSSEDPLELLKSFQ-DKGIEGATYLNDLEPPAFKALPMLKQMKQDM 256

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BLAST of mRNA_H-elongata_contig84310.16045.1 vs. uniprot
Match: A0A7S2V6H6_9STRA (4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6H6_9STRA)

HSP 1 Score: 164 bits (416), Expect = 2.240e-49
Identity = 81/133 (60.90%), Postives = 105/133 (78.95%), Query Frame = 0

Query:    1 VYLDKRIPPEAGLGGGSANAATALFAANELAGRPASLRDLQMWSAELGSDITFFLSTGTCYCTGRGEILHPQKPLPPTSVWLVKPSEGLSTRNVFSHLDYDQLSRVEPSKLLEQFTTQQGLVDAHFVNDLESP 133
            VYLDK +P +AGLGGGSANAATA+FAANEL G PAS++DL++WSA++GSDITFF S G+CYCTGRGEIL P  P+P   V+LVKPSEGL T  VF +L+ ++ S+ +P ++LE F  +  L  A+++NDLE P
Sbjct:   25 VYLDKNVPAQAGLGGGSANAATAMFAANELTGSPASMKDLELWSADIGSDITFFFSCGSCYCTGRGEILDPVDPIPTYPVYLVKPSEGLPTPLVFKNLNLEENSKEDPLQVLETF--KGDLFKANYINDLEKP 155

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BLAST of mRNA_H-elongata_contig84310.16045.1 vs. uniprot
Match: A0A7S4C8S3_9EUGL (4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4C8S3_9EUGL)

HSP 1 Score: 165 bits (418), Expect = 3.640e-46
Identity = 90/152 (59.21%), Postives = 104/152 (68.42%), Query Frame = 0

Query:    1 VYLDKRIPPEAGLGGGSANAATALFAANELAGRPASLRDLQMWSAELGSDITFFLSTGTCYCTGRGEILHPQKPLPPTSVWLVKPSEGLSTRNVFSHLDYDQLSRVEPSKLLEQFTTQQGLVDAH----FVNDLESPAFKAMPSLRQIKQEL 148
            V L+K++P +AGLGGGS NAAT L+A NEL GRPA+L  L  WS  LGSDITFFLS GT YCTGRGEIL P  PLPP  ++L KP  GLST  VF  LDY+ LS  +P  LL QF   Q  V A     +VNDLE PAF+ +P L  IK+EL
Sbjct:  259 VRLEKKVPAQAGLGGGSGNAATTLWAVNELYGRPATLEQLVEWSGALGSDITFFLSGGTAYCTGRGEILTPLPPLPPQRIYLFKPDIGLSTPAVFKALDYEALSPADPEDLLAQFQAAQPDVAAASRDIYVNDLEPPAFRLVPELAAIKEEL 410

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BLAST of mRNA_H-elongata_contig84310.16045.1 vs. uniprot
Match: A0A2V3J5K4_9FLOR (4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5K4_9FLOR)

HSP 1 Score: 159 bits (403), Expect = 2.320e-45
Identity = 80/148 (54.05%), Postives = 111/148 (75.00%), Query Frame = 0

Query:    1 VYLDKRIPPEAGLGGGSANAATALFAANELAGRPASLRDLQMWSAELGSDITFFLSTGTCYCTGRGEILHPQKPLPPTSVWLVKPSEGLSTRNVFSHLDYDQLSRVEPSKLLEQFTTQQGLVDAHFVNDLESPAFKAMPSLRQIKQEL 148
            V L+KR+P EAGLGGGSANAATAL+AAN+L+G+P +   L  + A+ GSDI+FFLS GT YCTGRGEI+     LPP ++++VKP EGLST  VF ++D  + S  +P +LL +   Q+G++ A FVNDLE+P+F+ MP L+ +K++L
Sbjct:  110 VRLEKRVPHEAGLGGGSANAATALWAANQLSGKPCTAEQLAEFGADFGSDISFFLSEGTAYCTGRGEIMEFVPRLPPQALYIVKPYEGLSTAEVFKNMDLSECSEKDPRELLRKM--QKGVIFADFVNDLETPSFRLMPRLKTLKEDL 255

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BLAST of mRNA_H-elongata_contig84310.16045.1 vs. uniprot
Match: A0A7S2LLF5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LLF5_9STRA)

HSP 1 Score: 160 bits (406), Expect = 2.520e-45
Identity = 86/150 (57.33%), Postives = 109/150 (72.67%), Query Frame = 0

Query:    3 LDKRIPPEAGLGGGSANAATALFAANELAGRPASLRDLQMWSAELGSDITFFLSTGTCYCTGRGEILHPQKPLPP-TSVWLVKPSEGLSTRNVFSHLDYDQLSRVEPSKLLEQFTTQQGLVDAH---FVNDLESPAFKAMPSLRQIKQEL 148
            L K +P +AGLGGGS NAA AL+ ANEL GRPA+L  L  WS +LGSDITFFLS GT YCTGRGEI+ P  PLP   +V++VKP  GLST +VF  LDYD LS ++P ++L  F T+ G+  ++   FVNDLE PAFK +P L+++K +L
Sbjct:  152 LVKHVPHQAGLGGGSGNAAAALYGANELLGRPATLEQLVEWSGDLGSDITFFLSEGTAYCTGRGEIMTPVDPLPAGQTVYIVKPDIGLSTPSVFKALDYDLLSTLDPEEILNVFMTE-GVTTSNQSVFVNDLEPPAFKVVPELKELKDDL 300

[Close]

BLAST of mRNA_H-elongata_contig84310.16045.1 vs. uniprot
Match: A0A1M3CW31_9CHLA (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Chlamydiales bacterium 38-26 TaxID=1895743 RepID=A0A1M3CW31_9CHLA)

HSP 1 Score: 158 bits (400), Expect = 2.970e-45
Identity = 85/148 (57.43%), Postives = 104/148 (70.27%), Query Frame = 0

Query:    1 VYLDKRIPPEAGLGGGSANAATALFAANELAGRPASLRDLQMWSAELGSDITFFLSTGTCYCTGRGEILHPQKPLPPTSVWLVKPSEGLSTRNVFSHLDYDQLSRVEPSKLLEQFTTQQGLVDAHFVNDLESPAFKAMPSLRQIKQEL 148
            V+L+K IP EAGLGGGS+NAAT L+A NEL  R   L+DL  WSAE+GSDITFF S GT YCTGRGEI++   PLP  S+W+ KP++GLST  VF HLD  QLS  +P + L  F   + L   H+ NDLE PAF+  P+L  IKQ+L
Sbjct:   95 VHLEKHIPYEAGLGGGSSNAATTLWALNELHSRAYPLQDLMTWSAEIGSDITFFFSNGTAYCTGRGEIINSLNPLPRESLWIAKPAQGLSTPAVFKHLDLTQLSLHDPERTLIGFYNGRPL---HY-NDLEEPAFRIDPTLHHIKQQL 238

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BLAST of mRNA_H-elongata_contig84310.16045.1 vs. uniprot
Match: B8BTG9_THAPS (4-diphosphocytidyl-2c-methyl-d-erythritol kinase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTG9_THAPS)

HSP 1 Score: 158 bits (399), Expect = 4.900e-45
Identity = 87/151 (57.62%), Postives = 111/151 (73.51%), Query Frame = 0

Query:    3 LDKRIPPEAGLGGGSANAATALFAANELAGRPASLRDLQMWSAELGSDITFFLSTGTCYCTGRGEILHP-QKPLPPTS-VWLVKPSEGLSTRNVFSHLDYDQLSRVEPSKLLEQFTTQQGLVDA---HFVNDLESPAFKAMPSLRQIKQEL 148
            L KR+P +AGLGGGSANAATA++ ANEL G+PA+L +L  WS ELGSDITFFLS GT YCTGRGE++ P   PLP  S + +VKP  GLST  VFS LDY+QLS  +P +LL  F  + G+VD    +++NDLE PAF  +P L+ +K++L
Sbjct:   88 LFKRVPAQAGLGGGSANAATAMWGANELMGKPATLGELIEWSGELGSDITFFLSRGTAYCTGRGEVMTPIDPPLPSGSKLSIVKPDLGLSTPKVFSALDYEQLSAEDPEELLNTFL-EFGVVDTDDEYYINDLEQPAFDCLPELKALKEDL 237

[Close]

BLAST of mRNA_H-elongata_contig84310.16045.1 vs. uniprot
Match: R7Q8C9_CHOCR (4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8C9_CHOCR)

HSP 1 Score: 155 bits (391), Expect = 5.710e-44
Identity = 78/149 (52.35%), Postives = 111/149 (74.50%), Query Frame = 0

Query:    1 VYLDKRIPPEAGLGGGSANAATALFAANELAGRPASLRDLQMWSAELGSDITFFLSTGTCYCTGRGEILHPQKPLPPTSVWLVKPSEGLSTRNVFSHLDYDQLSRVEPSKLLEQFTTQQGLVDAHFVNDLESPAFKAMPSLRQIKQELK 149
            V L+KR+P +AGLGGGSANAATAL+AAN LA +P + + L  + AE GSD++FFLS+GT YCTGRGE+L   +PLP  S++++KP+EGLST  VF  L  +  S  +P +LL++   + G++ A +VNDLE P+FK +P L ++K++LK
Sbjct:  110 VRLEKRVPFQAGLGGGSANAATALWAANVLADKPCTNKQLAEFGAEFGSDVSFFLSSGTAYCTGRGEVLEDVQPLPQESLFIIKPNEGLSTAEVFKTLKMEDCSDRDPRQLLDKM--RAGVISAEYVNDLEVPSFKLLPRLAELKEKLK 256

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig84310.16045.1 vs. uniprot

BLAST of mRNA_H-elongata_contig84310.16045.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G6C7_ECTSI	8.860e-75	79.05	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol ...	[more]
A0A7S3YEW3_HETAK	5.550e-57	63.58	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A835Z2M9_9STRA	5.430e-53	60.40	4-diphosphocytidyl-2c-methyl-d-erythritol kinase n...	[more]
A0A7S2V6H6_9STRA	2.240e-49	60.90	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol ...	[more]
A0A7S4C8S3_9EUGL	3.640e-46	59.21	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol ...	[more]
A0A2V3J5K4_9FLOR	2.320e-45	54.05	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol ...	[more]
A0A7S2LLF5_9STRA	2.520e-45	57.33	Hypothetical protein n=1 Tax=Leptocylindrus danicu...	[more]
A0A1M3CW31_9CHLA	2.970e-45	57.43	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase ...	[more]
B8BTG9_THAPS	4.900e-45	57.62	4-diphosphocytidyl-2c-methyl-d-erythritol kinase (...	[more]
R7Q8C9_CHOCR	5.710e-44	52.35	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036554	GHMP kinase, C-terminal domain superfamily	GENE3D	3.30.70.890		coord: 75..151 e-value: 8.5E-12 score: 47.2
IPR036554	GHMP kinase, C-terminal domain superfamily	SUPERFAMILY	55060	GHMP Kinase, C-terminal domain	coord: 75..148
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 1..72 e-value: 4.0E-24 score: 87.1
IPR006204	GHMP kinase N-terminal domain	PFAM	PF00288	GHMP_kinases_N	coord: 2..46 e-value: 3.7E-6 score: 27.1
None	No IPR available	PANTHER	PTHR43527	FAMILY NOT NAMED	coord: 2..149
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 1..70

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig84310	contig	H-elongata_contig84310:1178..2190 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig84310.16045.1	mRNA_H-elongata_contig84310.16045.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig84310 1178..2190 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig84310.16045.1 ID=prot_H-elongata_contig84310.16045.1|Name=mRNA_H-elongata_contig84310.16045.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=152bp
VYLDKRIPPEAGLGGGSANAATALFAANELAGRPASLRDLQMWSAELGSD
ITFFLSTGTCYCTGRGEILHPQKPLPPTSVWLVKPSEGLSTRNVFSHLDY
DQLSRVEPSKLLEQFTTQQGLVDAHFVNDLESPAFKAMPSLRQIKQELKV
RW

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036554	GHMP_kinase_C_sf
IPR014721	Ribosomal_S5_D2-typ_fold_subgr
IPR006204	GHMP_kinase_N_dom
IPR020568	Ribosomal_S5_D2-typ_fold