prot_H-elongata_contig84282.16042.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig84282.16042.1
Unique Nameprot_H-elongata_contig84282.16042.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length320
Homology
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BLAST of mRNA_H-elongata_contig84282.16042.1 vs. uniprot
Match: A0A6H5KJS1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJS1_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 1.220e-15
Identity = 56/112 (50.00%), Postives = 71/112 (63.39%), Query Frame = 0 
Query:  207 PATEASGMSTMLTRGTNAAEALKARGARRAGLPALDAARDVATLGGTERQIASRTSALMRRMTEAGRKGRWREVLPALEEMLDQGLVSDGRPFTVAIKALGDNRQTDRALTL 318
            PA   +G ST      N+   +  R  R+  LPA D     A L    ++  S  +A MRRMTEAG++GRWR+V+PALEEML+ GLV+DGRP+TVAIKALGDN +   AL L
Sbjct:  155 PAGVTAGSSTTDANMQNSGTRIDERSRRK--LPAPDTP---ARLVVEAKKSTSAAAAFMRRMTEAGKRGRWRDVVPALEEMLNLGLVTDGRPYTVAIKALGDNGKAAEALKL 261
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BLAST of mRNA_H-elongata_contig84282.16042.1 vs. uniprot
Match: D7G0E7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0E7_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 1.140e-13
Identity = 39/55 (70.91%), Postives = 48/55 (87.27%), Query Frame = 0 
Query:  255 RQIASRTSALMRRMTEAGRKGRWREVLPALEEMLDQGLVSDGRPFTVAIKALGDN 309
            ++ AS  +A MRRMTEAG++GRWR+V+PALEEM   GLV+DGRP+TVAIKALGDN
Sbjct:   30 KKSASAAAAFMRRMTEAGKRGRWRDVVPALEEMRSLGLVTDGRPYTVAIKALGDN 84
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig84282.16042.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJS1_9PHAE1.220e-1550.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0E7_ECTSI1.140e-1370.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig84282contigH-elongata_contig84282:810..2433 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig84282.16042.1mRNA_H-elongata_contig84282.16042.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig84282 810..2433 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig84282.16042.1 ID=prot_H-elongata_contig84282.16042.1|Name=mRNA_H-elongata_contig84282.16042.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=320bp
LGQTAPPFPADSYPSLCCCLDCFILLNSQQAMSSRESKSLRYNVSTMLAF
GFPTTPTTSSAVHQPASIPQCCVRGPPRGIALAAGRDFDLATQRPALCPP
NHTIISWKRFPRRGGWPALGMAAEASTGDSGVGLVESKEVTTDKGARGEI
IGSRRDRHGAGWDSTSTRSTRGVGGEILAGTHDSNIATPSNGSDVFVWPG
LSTPTMPATEASGMSTMLTRGTNAAEALKARGARRAGLPALDAARDVATL
GGTERQIASRTSALMRRMTEAGRKGRWREVLPALEEMLDQGLVSDGRPFT
VAIKALGDNRQTDRALTLLQ
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