prot_H-elongata_contig842.16038.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig842.16038.1
Unique Nameprot_H-elongata_contig842.16038.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length121
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig842.16038.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..113
e-value: 2.8E-10
score: 41.8
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 2..43
score: 8.782
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 2..43
score: 8.771
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 7..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig842contigH-elongata_contig842:14573..18137 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig842.16038.1mRNA_H-elongata_contig842.16038.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig842 14539..18459 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig842.16038.1 ID=prot_H-elongata_contig842.16038.1|Name=mRNA_H-elongata_contig842.16038.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=121bp
MSSASERPIRAIALSPGAQRVAAAGDAGDIEIWNTKDKRKMKADTVRQGS
PVTCVSFLESEARVAAGDVGGRVLVHRLKGLADEDEVRRMERIDRFGSGK
VAAASRHLPRRSRGRKGVRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR001680WD40_repeat
IPR036322WD40_repeat_dom_sf