prot_H-elongata_contig84198.16037.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig84198.16037.1
Unique Nameprot_H-elongata_contig84198.16037.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length314
Homology
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BLAST of mRNA_H-elongata_contig84198.16037.1 vs. uniprot
Match: A0A6H5KI22_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI22_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 1.180e-35
Identity = 68/103 (66.02%), Postives = 78/103 (75.73%), Query Frame = 0 
Query:    1 IRQAYWSGTAYMGETTGAFFSSAVESSLEYLSENPRYQPFSVYEDYPGFEYLAASSCDEFAWTLLAKAQELGVHLTPALLPKKHKIIIYTEMRPEKIKLDGSG 103
            + QAYW+  +YMGETTGAFFS AVE SLEY   +PRYQPFSVYEDYPG E+L AS CDEF W LL+ AQ  GV L PALLP+KHKI+IY+  +PE I   G G
Sbjct:  122 VEQAYWNAGSYMGETTGAFFSYAVEFSLEYHRLHPRYQPFSVYEDYPGREFLTASGCDEFVWALLSAAQTRGVRLIPALLPQKHKIVIYSHSKPEIIVFSGDG 224
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BLAST of mRNA_H-elongata_contig84198.16037.1 vs. uniprot
Match: A0A835ZL91_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL91_9STRA)

HSP 1 Score: 117 bits (293), Expect = 1.060e-25
Identity = 52/101 (51.49%), Postives = 70/101 (69.31%), Query Frame = 0 
Query:    5 YWSGTAYMGETTGAFFSSAVESSLEYLSENPRYQPFSVYEDYPGFEYLAASSCDEFAWTLLAKAQELGVHLTPALLPKKHKIIIYTEMRPEKIKLDGSGVG 105
            YWS  +Y+  TTG+ FS+AV+ + +Y  ENP YQPFSVY+ YPG + +AASSCDEF W L+  A   GV +TP++LPKK KII+Y + +P  I +D    G
Sbjct:  153 YWSSASYLASTTGSMFSAAVQLAAKYHQENPHYQPFSVYQKYPGRQLVAASSCDEFVWVLVEAANSKGVQVTPSILPKKIKIIVYADNKPVLIDIDDPSDG 253
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BLAST of mRNA_H-elongata_contig84198.16037.1 vs. uniprot
Match: A0A7S2V1C8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1C8_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 1.580e-16
Identity = 42/102 (41.18%), Postives = 58/102 (56.86%), Query Frame = 0 
Query:    1 IRQAYWSGTAYMGETTGAFFSSAVESSLEYLSENPRYQPFSVYEDYPGFEYLAASSCDEFAWTLLAKAQELGVHLTPALLPKKHKIIIYTEMRPEKIKLDGS 102
            I    W    YMG   G+ F   ++ +L+Y  ++  YQPFSVY+ YPG  Y+ A SCDEF W L  K   L + L P ++PKK KII+Y+   PE   L+ +
Sbjct:   39 IDSTVWDSITYMGTMGGSTFRYLLDYALDYGVKHTFYQPFSVYDAYPGHLYIPAISCDEFTWKLFEKLANLQITLNPVVVPKKVKIILYSPCEPEVYALNNT 140
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BLAST of mRNA_H-elongata_contig84198.16037.1 vs. uniprot
Match: D7FTM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTM5_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 8.000e-12
Identity = 35/48 (72.92%), Postives = 40/48 (83.33%), Query Frame = 0 
Query:    1 IRQAYWSGTAYMGETTGAFFSSAVESSLEYLSENPRYQPFSVYEDYPG 48
            + QAYW+  +YMGETTGAFFS AVE SLE+   +PRYQPFSVYEDYPG
Sbjct:  122 VDQAYWNAGSYMGETTGAFFSYAVEFSLEHHRLHPRYQPFSVYEDYPG 169
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig84198.16037.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KI22_9PHAE1.180e-3566.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZL91_9STRA1.060e-2551.49Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V1C8_9STRA1.580e-1641.18Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D7FTM5_ECTSI8.000e-1272.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15380:SF2CEROID-LIPOFUSCINOSIS NEURONAL PROTEIN 5coord: 1..106
IPR026138Ceroid-lipofuscinosis neuronal protein 5PANTHERPTHR15380CEROID-LIPOFUSCINOSIS, NEURONAL 5coord: 1..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig84198contigH-elongata_contig84198:400..2374 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig84198.16037.1mRNA_H-elongata_contig84198.16037.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig84198 400..2374 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig84198.16037.1 ID=prot_H-elongata_contig84198.16037.1|Name=mRNA_H-elongata_contig84198.16037.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=314bp
IRQAYWSGTAYMGETTGAFFSSAVESSLEYLSENPRYQPFSVYEDYPGFE
YLAASSCDEFAWTLLAKAQELGVHLTPALLPKKHKIIIYTEMRPEKIKLD
GSGVGSGRNPEKSGDGDGKGRASSEAKGGDSDSASWLSSSSFAAGSYASD
GDRGGGGGGEEEERDGDDSNGDGDAGDNSNRRKRQRGRQRSLMLLEGEGE
NRQEGATSMYSATSSPSRFDYDGGGDGEGGNDGSDDNDSSGKDAEHSATE
PEEEGEEEKEGGGEEAAEIIETLKPTPSPLQAEDSEGEREEQQPLDEWQE
VVAYYQSLQLCLQE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026138CLN5