prot_H-elongata_contig84188.16035.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig84188.16035.1
Unique Nameprot_H-elongata_contig84188.16035.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length77
Homology
BLAST of mRNA_H-elongata_contig84188.16035.1 vs. uniprot
Match: D8LCV6_ECTSI (Alanine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCV6_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 3.990e-35
Identity = 62/77 (80.52%), Postives = 67/77 (87.01%), Query Frame = 0
Query:    1 SFGDYFKEEAVEWGFDALTKGAFGLPPDRLYATYFGGDEALGLSADLETRDLWLKFLPPKRVLPGDRKDNFWEVGRV 77
            SFGDYFKEEAVEWGF+AL +  FGLP DRLYATYFGGDE LGL+ DLETRDLWLK LP  RV+PGDRKDNFWE+G V
Sbjct:  253 SFGDYFKEEAVEWGFEALNE-VFGLPADRLYATYFGGDEELGLAPDLETRDLWLKVLPEDRVMPGDRKDNFWEMGDV 328          
BLAST of mRNA_H-elongata_contig84188.16035.1 vs. uniprot
Match: A0A7R9U3E4_9STRA (Alanine--tRNA ligase (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3E4_9STRA)

HSP 1 Score: 117 bits (293), Expect = 7.640e-32
Identity = 52/75 (69.33%), Postives = 61/75 (81.33%), Query Frame = 0
Query:    1 SFGDYFKEEAVEWGFDALTKGAFGLPPDRLYATYFGGDEALGLSADLETRDLWLKFLPPKRVLPGDRKDNFWEVG 75
            SFGDYFK EA+ W ++ L K  +GL PD+LYATYFGGDEALG+ ADLE RDLWL++LP  RVLP D KDNFWE+G
Sbjct:   77 SFGDYFKAEAINWAWELLVK-VYGLNPDQLYATYFGGDEALGVEADLEARDLWLQYLPESRVLPFDSKDNFWEMG 150          
BLAST of mRNA_H-elongata_contig84188.16035.1 vs. uniprot
Match: A0A7S0SRE6_9STRA (Alanine--tRNA ligase (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SRE6_9STRA)

HSP 1 Score: 118 bits (295), Expect = 1.350e-30
Identity = 51/77 (66.23%), Postives = 62/77 (80.52%), Query Frame = 0
Query:    1 SFGDYFKEEAVEWGFDALTKGAFGLPPDRLYATYFGGDEALGLSADLETRDLWLKFLPPKRVLPGDRKDNFWEVGRV 77
            SFGDYFKEEA++W +D L    + LPPDRLYA+YFGGDE+LG+ ADLE RD WLK+LP +RVLP D+K NFWE+G  
Sbjct:  127 SFGDYFKEEAIDWAYDILVN-VYKLPPDRLYASYFGGDESLGIPADLEARDYWLKYLPNERVLPFDKKANFWEMGET 202          
BLAST of mRNA_H-elongata_contig84188.16035.1 vs. uniprot
Match: A0A835ZLN6_9STRA (Alanine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLN6_9STRA)

HSP 1 Score: 122 bits (305), Expect = 1.550e-30
Identity = 55/77 (71.43%), Postives = 62/77 (80.52%), Query Frame = 0
Query:    1 SFGDYFKEEAVEWGFDALTKGAFGLPPDRLYATYFGGDEALGLSADLETRDLWLKFLPPKRVLPGDRKDNFWEVGRV 77
            SFGDYFKEEA+EW +D LT+  + LPPDRLYATYFGGDEA+GL AD E RD WLK LP  R+LP DRK NFWE+G V
Sbjct:  129 SFGDYFKEEAIEWAWDILTR-VYALPPDRLYATYFGGDEAMGLPADNEARDFWLKVLPADRILPFDRKANFWEMGDV 204          
BLAST of mRNA_H-elongata_contig84188.16035.1 vs. uniprot
Match: A0A7S3TBJ3_9SPIT (Alanine--tRNA ligase (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TBJ3_9SPIT)

HSP 1 Score: 114 bits (284), Expect = 1.870e-30
Identity = 51/77 (66.23%), Postives = 60/77 (77.92%), Query Frame = 0
Query:    1 SFGDYFKEEAVEWGFDALTKGAFGLPPDRLYATYFGGDEALGLSADLETRDLWLKFLPPKRVLPGDRKDNFWEVGRV 77
            SFGDYFKEEA++W ++ LTK  +G+P DRLYATYF GDE+LGL  D E R  WLK+LP  RVLPG  KDNFWE+G V
Sbjct:   91 SFGDYFKEEAIDWAWELLTK-VYGVPGDRLYATYFEGDESLGLPPDEEARQFWLKYLPEGRVLPGSSKDNFWEMGDV 166          
BLAST of mRNA_H-elongata_contig84188.16035.1 vs. uniprot
Match: A0A7S0LGZ1_9EUKA (Alanine--tRNA ligase (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LGZ1_9EUKA)

HSP 1 Score: 112 bits (281), Expect = 3.050e-30
Identity = 49/75 (65.33%), Postives = 60/75 (80.00%), Query Frame = 0
Query:    1 SFGDYFKEEAVEWGFDALTKGAFGLPPDRLYATYFGGDEALGLSADLETRDLWLKFLPPKRVLPGDRKDNFWEVG 75
            SFGDYFK EAV+W ++  T+  +GLP DR YATYF GDE LGL+ D E R LWL++LPP+RVLPG+ KDNFWE+G
Sbjct:   60 SFGDYFKTEAVDWAWELFTQ-VYGLPEDRFYATYFEGDEKLGLAPDEEARQLWLRYLPPERVLPGNAKDNFWEMG 133          
BLAST of mRNA_H-elongata_contig84188.16035.1 vs. uniprot
Match: A0A6A2X108_HIBSY (Alanine--tRNA ligase n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2X108_HIBSY)

HSP 1 Score: 119 bits (298), Expect = 8.820e-30
Identity = 54/75 (72.00%), Postives = 61/75 (81.33%), Query Frame = 0
Query:    1 SFGDYFKEEAVEWGFDALTKGAFGLPPDRLYATYFGGDEALGLSADLETRDLWLKFLPPKRVLPGDRKDNFWEVG 75
            SFGDYFKEEA+EW ++ LTK  +GLP DR+YATYFGGDE +GL  D E RDLWLKFLPP RVLP   KDNFWE+G
Sbjct:  162 SFGDYFKEEAIEWAWELLTK-VYGLPTDRIYATYFGGDEKVGLPPDNEARDLWLKFLPPGRVLPFGCKDNFWEMG 235          
BLAST of mRNA_H-elongata_contig84188.16035.1 vs. uniprot
Match: A0A2G9G6G3_9LAMI (Alanine--tRNA ligase n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9G6G3_9LAMI)

HSP 1 Score: 119 bits (299), Expect = 1.000e-29
Identity = 52/75 (69.33%), Postives = 62/75 (82.67%), Query Frame = 0
Query:    1 SFGDYFKEEAVEWGFDALTKGAFGLPPDRLYATYFGGDEALGLSADLETRDLWLKFLPPKRVLPGDRKDNFWEVG 75
            SFGDYFK EA++WG++ LT+  + LP DR+YATYFGGDE LGL AD E +D+WLKFLPP RVLP D KDNFWE+G
Sbjct:  181 SFGDYFKNEAIQWGWELLTR-VYKLPSDRIYATYFGGDEKLGLPADTEAKDIWLKFLPPSRVLPFDCKDNFWEMG 254          
BLAST of mRNA_H-elongata_contig84188.16035.1 vs. uniprot
Match: A0A7S3W974_EMIHU (Alanine--tRNA ligase (Fragment) n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3W974_EMIHU)

HSP 1 Score: 117 bits (294), Expect = 4.730e-29
Identity = 51/77 (66.23%), Postives = 63/77 (81.82%), Query Frame = 0
Query:    1 SFGDYFKEEAVEWGFDALTKGAFGLPPDRLYATYFGGDEALGLSADLETRDLWLKFLPPKRVLPGDRKDNFWEVGRV 77
            SFGDYFKEEA++W ++ LT+  +GLPPDR YATYF GDE LGL+ D E R LWL++LP +RVLPG+ KDNFWE+G V
Sbjct:  180 SFGDYFKEEAIDWAWELLTQ-VYGLPPDRFYATYFEGDEGLGLAPDEEARQLWLRYLPEERVLPGNAKDNFWEMGDV 255          
BLAST of mRNA_H-elongata_contig84188.16035.1 vs. uniprot
Match: UPI001AC35D3C (Alanyl-tRNA synthetase n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=UPI001AC35D3C)

HSP 1 Score: 117 bits (293), Expect = 6.460e-29
Identity = 52/77 (67.53%), Postives = 62/77 (80.52%), Query Frame = 0
Query:    1 SFGDYFKEEAVEWGFDALTKGAFGLPPDRLYATYFGGDEALGLSADLETRDLWLKFLPPKRVLPGDRKDNFWEVGRV 77
            SFGDYFK+EAVEW +D LT+  +GLP DRLYATYF G+   GL  D+ETRDLWL+FLP +RVLPG+ KDNFWE+G  
Sbjct:  106 SFGDYFKKEAVEWSWDLLTQ-VYGLPADRLYATYFEGNPKAGLEPDIETRDLWLRFLPKERVLPGNMKDNFWEMGET 181          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig84188.16035.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCV6_ECTSI3.990e-3580.52Alanine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A7R9U3E4_9STRA7.640e-3269.33Alanine--tRNA ligase (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S0SRE6_9STRA1.350e-3066.23Alanine--tRNA ligase (Fragment) n=1 Tax=Chromulina... [more]
A0A835ZLN6_9STRA1.550e-3071.43Alanine--tRNA ligase n=1 Tax=Tribonema minus TaxID... [more]
A0A7S3TBJ3_9SPIT1.870e-3066.23Alanine--tRNA ligase (Fragment) n=1 Tax=Strombidin... [more]
A0A7S0LGZ1_9EUKA3.050e-3065.33Alanine--tRNA ligase (Fragment) n=1 Tax=Coccolithu... [more]
A0A6A2X108_HIBSY8.820e-3072.00Alanine--tRNA ligase n=1 Tax=Hibiscus syriacus Tax... [more]
A0A2G9G6G3_9LAMI1.000e-2969.33Alanine--tRNA ligase n=1 Tax=Handroanthus impetigi... [more]
A0A7S3W974_EMIHU4.730e-2966.23Alanine--tRNA ligase (Fragment) n=2 Tax=Emiliania ... [more]
UPI001AC35D3C6.460e-2967.53Alanyl-tRNA synthetase n=1 Tax=Phycisphaerales bac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018164Alanyl-tRNA synthetase, class IIc, N-terminalPFAMPF01411tRNA-synt_2ccoord: 1..76
e-value: 2.1E-17
score: 62.9
NoneNo IPR availableGENE3D3.30.930.10coord: 1..77
e-value: 4.6E-22
score: 80.6
NoneNo IPR availablePANTHERPTHR11777ALANYL-TRNA SYNTHETASEcoord: 1..76
NoneNo IPR availablePANTHERPTHR11777:SF9ALANINE--TRNA LIGASE, CYTOPLASMICcoord: 1..76
NoneNo IPR availableSUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 1..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig84188contigH-elongata_contig84188:115..345 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig84188.16035.1mRNA_H-elongata_contig84188.16035.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig84188 115..345 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig84188.16035.1 ID=prot_H-elongata_contig84188.16035.1|Name=mRNA_H-elongata_contig84188.16035.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=77bp
SFGDYFKEEAVEWGFDALTKGAFGLPPDRLYATYFGGDEALGLSADLETR
DLWLKFLPPKRVLPGDRKDNFWEVGRV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018164Ala-tRNA-synth_IIc_N