prot_H-elongata_contig84181.16033.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig84181.16033.1
Unique Nameprot_H-elongata_contig84181.16033.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length137
Homology
BLAST of mRNA_H-elongata_contig84181.16033.1 vs. uniprot
Match: A0A6H5JAH7_9PHAE (Reverse transcriptase domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAH7_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 1.100e-29
Identity = 56/123 (45.53%), Postives = 81/123 (65.85%), Query Frame = 0
Query:    1 MVKAEAIEALLHGCSTWTLRQKDYTKLRTVHHWVLLRIIGIQRQRPDHRMISYNFTLEITQCESIVTTLCTRRLLWAATLTQMSGGRLPKRIAFGNLEG-----RGRKEKEWTDCVQSDIRAF 118
            +++AEA+EALL+GC TW+     Y  LR++HH +LLR+IG +R++  +R +SY  TL   +CES+  T+  RRLL+A  L +   GRLPKR+ FG L G     RG +E+ W  CV  D++AF
Sbjct:  127 LLQAEAMEALLYGCMTWSPLSGHYQTLRSIHHRLLLRVIGYKRKKDTYRQLSYAQTLRRVECESVEPTIRQRRLLFAGALARQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVLDDLKAF 249          
BLAST of mRNA_H-elongata_contig84181.16033.1 vs. uniprot
Match: A0A6H5KN66_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN66_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 3.720e-28
Identity = 55/123 (44.72%), Postives = 81/123 (65.85%), Query Frame = 0
Query:    1 MVKAEAIEALLHGCSTWTLRQKDYTKLRTVHHWVLLRIIGIQRQRPDHRMISYNFTLEITQCESIVTTLCTRRLLWAATLTQMSGGRLPKRIAFGNL-----EGRGRKEKEWTDCVQSDIRAF 118
            +++AEA+EALL+GC TW  RQ  Y  LRT+HH +LLR++G QR +  +R +SY  TL+   C+S+ +T+  RRLL+A  L +   GRLPKR+  G L      GRG+ E+ W  C++ D++ F
Sbjct:  692 LLQAEAMEALLYGCMTWAPRQDQYRTLRTIHHRLLLRVVGYQRMKCTYRQLSYAQTLKRVGCQSVESTIRQRRLLFAGALARQPDGRLPKRLMLGELVGGEGSGRGKPEQNWQMCLKDDLKMF 814          
BLAST of mRNA_H-elongata_contig84181.16033.1 vs. uniprot
Match: A0A6H5KS82_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS82_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 1.230e-27
Identity = 55/123 (44.72%), Postives = 82/123 (66.67%), Query Frame = 0
Query:    1 MVKAEAIEALLHGCSTWTLRQKDYTKLRTVHHWVLLRIIGIQRQRPDHRMISYNFTLEITQCESIVTTLCTRRLLWAATLTQMSGGRLPKRIAFGNLEG-----RGRKEKEWTDCVQSDIRAF 118
            +++AEA+EALL+GC TW+   + Y  LR++HH +LLR+IG +R++  +R +SY  TL+  +C+S+  T+  RRLL+A  L +   GRLPKR+ FG L G     RG +E+ W  CV  D+ AF
Sbjct:  479 LLQAEAMEALLYGCMTWSPLSRHYQTLRSIHHRLLLRVIGYKRKKDTYRQLSYAQTLKRFECQSVEATIRQRRLLFAGALARQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVLDDLNAF 601          
BLAST of mRNA_H-elongata_contig84181.16033.1 vs. uniprot
Match: A0A6H5KLX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLX9_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 1.550e-27
Identity = 54/132 (40.91%), Postives = 83/132 (62.88%), Query Frame = 0
Query:    1 MVKAEAIEALLHGCSTWTLRQKDYTKLRTVHHWVLLRIIGIQRQRPDHRMISYNFTLEITQCESIVTTLCTRRLLWAATLTQMSGGRLPKRIAFGNL-----EGRGRKEKEWTDCVQSDIRAFV---ITGDW 124
            +++AEA+EALL+GC TW+ R+  Y  L+T HH +LLR+IG +R+R  +R +SY   L+   C+S+  T+  RRLL+A  + +   GRLPKR+ FG L      G+G  E+ W  C++ D++ F    + G W
Sbjct:  157 LLQAEAVEALLYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPKRLMFGELVGGEDPGQGNPEQNWLTCLKDDMKMFEARELRGSW 288          
BLAST of mRNA_H-elongata_contig84181.16033.1 vs. uniprot
Match: A0A6H5JLH5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLH5_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 1.660e-27
Identity = 52/123 (42.28%), Postives = 80/123 (65.04%), Query Frame = 0
Query:    1 MVKAEAIEALLHGCSTWTLRQKDYTKLRTVHHWVLLRIIGIQRQRPDHRMISYNFTLEITQCESIVTTLCTRRLLWAATLTQMSGGRLPKRIAFGNL-----EGRGRKEKEWTDCVQSDIRAF 118
            +++AEA+EALL+GC TW+ R+  Y  L+T HH +LLR+IG +R+R  +R +SY   L+   C+S+  T+  RRLL+A  + +   GRLPKR+ FG L      G+G  E+ W  C++ D++ F
Sbjct:  106 LLQAEAVEALLYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPKRLMFGELVGGEDPGQGNPEQNWLTCLKDDMKMF 228          
BLAST of mRNA_H-elongata_contig84181.16033.1 vs. uniprot
Match: A0A6H5KQ16_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ16_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 3.140e-27
Identity = 50/121 (41.32%), Postives = 80/121 (66.12%), Query Frame = 0
Query:    1 MVKAEAIEALLHGCSTWTLRQKDYTKLRTVHHWVLLRIIGIQRQRPDHRMISYNFTLEITQCESIVTTLCTRRLLWAATLTQMSGGRLPKRIAFGNLEG-----RGRKEKEWTDCVQSDIR 116
            +++AEA+EALL+GC TW+     Y  LR++HH +LLR++G +R++  +R + +  TL+  +C+S+  T+  RR+L+A  LT+   GRLPKR+ FG L G     RG +E+ W  CV  D++
Sbjct:  127 LLQAEAMEALLYGCMTWSPLSGHYQTLRSIHHRLLLRVVGYKRKKDTYRQLGHAQTLKRVECQSVAATIRQRRILFAGALTRQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVLDDLK 247          
BLAST of mRNA_H-elongata_contig84181.16033.1 vs. uniprot
Match: A0A6H5JYE2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYE2_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 3.880e-27
Identity = 51/117 (43.59%), Postives = 77/117 (65.81%), Query Frame = 0
Query:    7 IEALLHGCSTWTLRQKDYTKLRTVHHWVLLRIIGIQRQRPDHRMISYNFTLEITQCESIVTTLCTRRLLWAATLTQMSGGRLPKRIAFGNLEG-----RGRKEKEWTDCVQSDIRAF 118
            +EALL+ C+TW+     Y  LR++HH +LLR+IG +R++  +R +SY  TL+  +C+S+  T+  RRLL+A +L +   GRLPKR+ FG L G     RG +E+ W  CV  D++AF
Sbjct:    1 MEALLYSCTTWSPLSGHYQTLRSIHHRLLLRVIGYKRKKDTYRQLSYAQTLKRVECQSVEATIRQRRLLFAGSLARQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVLDDLKAF 117          
BLAST of mRNA_H-elongata_contig84181.16033.1 vs. uniprot
Match: A0A6H5K1X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1X4_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 5.030e-27
Identity = 54/123 (43.90%), Postives = 81/123 (65.85%), Query Frame = 0
Query:    1 MVKAEAIEALLHGCSTWTLRQKDYTKLRTVHHWVLLRIIGIQRQRPDHRMISYNFTLEITQCESIVTTLCTRRLLWAATLTQMSGGRLPKRIAFGNLEG-----RGRKEKEWTDCVQSDIRAF 118
            +++AEA+EALL+GC TW+     Y  LR++HH +LLR+IG +R++  +R +SY  TL+  +C+S+  T+  RRLL+A  L +   GRLPKR+  G L G     RG +E+ W  CV  D++AF
Sbjct:  151 LLQAEAMEALLYGCMTWSPLSGHYQTLRSIHHRLLLRVIGYKRKKDTYRQLSYAQTLKRVECQSVEATIRQRRLLFAGALARQPDGRLPKRLMLGELAGGEKRRRGGQEQNWPKCVLDDLKAF 273          
BLAST of mRNA_H-elongata_contig84181.16033.1 vs. uniprot
Match: A0A6H5JWS4_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWS4_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 7.720e-27
Identity = 52/123 (42.28%), Postives = 80/123 (65.04%), Query Frame = 0
Query:    1 MVKAEAIEALLHGCSTWTLRQKDYTKLRTVHHWVLLRIIGIQRQRPDHRMISYNFTLEITQCESIVTTLCTRRLLWAATLTQMSGGRLPKRIAFGNL-----EGRGRKEKEWTDCVQSDIRAF 118
            +++AEA+EALL+GC TW+ R+  Y  L+T HH +LLR+IG +R+R  +R +SY   L+   C+S+  T+  RRLL+A  + +   GRLPKR+ FG L      G+G  E+ W  C++ D++ F
Sbjct:  125 LLQAEAVEALLYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPKRLMFGELVGGEDPGQGNPEQNWLTCLKDDMKMF 247          
BLAST of mRNA_H-elongata_contig84181.16033.1 vs. uniprot
Match: A0A6H5JLT1_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLT1_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 7.830e-27
Identity = 54/123 (43.90%), Postives = 80/123 (65.04%), Query Frame = 0
Query:    1 MVKAEAIEALLHGCSTWTLRQKDYTKLRTVHHWVLLRIIGIQRQRPDHRMISYNFTLEITQCESIVTTLCTRRLLWAATLTQMSGGRLPKRIAFGNLEG-----RGRKEKEWTDCVQSDIRAF 118
            +++AEA+EALL+GC TW+     Y  LR++HH +L R+IG + ++  +R +SY  TLE  +C+S+  T+  RRLL+A  L +   GRLPKR+ FG L G     RG +E+ W  CV  D++AF
Sbjct:  390 LLQAEAMEALLYGCMTWSPLSGHYQTLRSIHHRLLFRVIGYKLKKDTYRQLSYPRTLERVECQSVEATIRQRRLLFAGALARQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVLDDLKAF 512          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig84181.16033.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAH7_9PHAE1.100e-2945.53Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KN66_9PHAE3.720e-2844.72Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KS82_9PHAE1.230e-2744.72Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KLX9_9PHAE1.550e-2740.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLH5_9PHAE1.660e-2742.28Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQ16_9PHAE3.140e-2741.32Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JYE2_9PHAE3.880e-2743.59Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K1X4_9PHAE5.030e-2743.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWS4_9PHAE7.720e-2742.28Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLT1_9PHAE7.830e-2743.90Reverse transcriptase domain-containing protein (F... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR47027FAMILY NOT NAMEDcoord: 3..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig84181contigH-elongata_contig84181:370..780 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig84181.16033.1mRNA_H-elongata_contig84181.16033.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig84181 364..780 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig84181.16033.1 ID=prot_H-elongata_contig84181.16033.1|Name=mRNA_H-elongata_contig84181.16033.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=137bp
MVKAEAIEALLHGCSTWTLRQKDYTKLRTVHHWVLLRIIGIQRQRPDHRM
ISYNFTLEITQCESIVTTLCTRRLLWAATLTQMSGGRLPKRIAFGNLEGR
GRKEKEWTDCVQSDIRAFVITGDWKATVLKAEVRGET
back to top