prot_H-elongata_contig8403.16013.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8403.16013.1
Unique Nameprot_H-elongata_contig8403.16013.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length760
Homology
BLAST of mRNA_H-elongata_contig8403.16013.1 vs. uniprot
Match: D7G8A2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8A2_ECTSI)

HSP 1 Score: 191 bits (485), Expect = 4.860e-47
Identity = 204/530 (38.49%), Postives = 264/530 (49.81%), Query Frame = 0
Query:  289 PGATMRIPVLVPQSGAD-EALVLSICSEDQSRMF---VDEDDVLASALAACLGTAILASRARRRVRELAEETDADLEVRREREQAANAAATADAAEARCXAERAAADTRALITTARGLKAQAESAAAACRRAERQTEALWHLLVGLHSA-RRDHAAIATAVTERAVAVVPACERAVLLTPRQGRRWEKMPEAT-EDRDRANFFSPDPRVWASAASGKRGRRSERGGRSGVGKGWAGTIERAALKAVAEGKTVCV-------------RDRFDGATVSPQR-VFCFSPLSQSAMTPQPGRYSRAERGSENVRPKGG---------DQIDRVDQTGSDA-DGSCSAVCAIAWVLRLNKTVAR---------VGSHPIDVEPVA-AWSLPP------LPERVSTVIEVVGLAVSLALFAP--SDKLSGALARRYACADISTRSQEG----SRDHEM-------------KRRREKEXXXXXXXXLRRETAALASRVQTLECKAAGLRASEARSSSALARAEADAMAAKGELEL 753
            PG   ++ V +P  G+  E LVLSI     +R     + +   + SALAACLG A+   R +  VR L           +ER++ A A  +A  AEAR   +RA A  RAL+  A   KAQA + AAA  RA++QT+AL HLL GL  A R+ HAA+A +V   A AVVP CE +VLLTPR+ R       A     DR   FSPDPR WA+A + +     +   R   GK WA T+E AA++A + GKT+CV             RD  DG   S Q  V  FSP+  + +  +P R    E G        G         + +D V  TGS A  GS      +AWVLRL+   A           GS    V P+  A S PP      LP+ +S+ I  V  AV LALFA   +D++ G  AR  A     + S+      +R HE+             K  RE+E        LR  T ALA RV+TLE +AAGLRASEARS++ALARA AD  A +GEL+L
Sbjct:  321 PGLAKQLQVHIPYYGSRAEPLVLSIRGNSNARQGCFRIRDRFAVGSALAACLGIALQVLREKEHVRRL-----------KERDEVAAACTSAAEAEARTRGQRAVAGMRALVAAAEASKAQALTEAAAAERADQQTDALRHLLSGLDDAGRKGHAAVAASVERLASAVVPGCEGSVLLTPRRHRSGGSSRSAAGAGGDRRTSFSPDPRAWATATASRMHGAVDGSERFECGKAWARTVEEAAVQAYSTGKTMCVTMDLTPARSSQGCRDGNDGGGASRQSPVVYFSPVP-AVLPVEPERLVNGENGGPGTPVSSGRMRAAELQREYVDCV--TGSCAMSGSVGTTGLLAWVLRLDAVEAACDDGDDEEGAGSPSDAVSPLTEAISEPPSPPRTHLPQCISSAINAVVHAVGLALFATDTADEIHGRPARSNAFKRRRSSSRRARHVENRMHEVISSSTGPGETQLAKSSREEELRR-----LRDGTTALAERVKTLEGRAAGLRASEARSAAALARARADVGATRGELQL 831          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8403.16013.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8A2_ECTSI4.860e-4738.49Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 362..382
NoneNo IPR availableCOILSCoilCoilcoord: 702..722
NoneNo IPR availableCOILSCoilCoilcoord: 157..191
NoneNo IPR availableCOILSCoilCoilcoord: 399..419

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8403contigH-elongata_contig8403:2816..5143 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8403.16013.1mRNA_H-elongata_contig8403.16013.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8403 2816..5146 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8403.16013.1 ID=prot_H-elongata_contig8403.16013.1|Name=mRNA_H-elongata_contig8403.16013.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=760bp
MGEAVTQAGAASIAAAFFRKQVAACAWADEELPTCTLITKRSHETGISEA
SSLRFPLGVCHEEHALVSSGSVRELVVSRGGAGPDFSPKEKRVCAKAAAL
LDQALCRIRHEEALVATKAALESSLRGMEEASTVVAVMTEERKQRVEVHE
QARTELRQNHERELSAVREELRRSCEEASELQRRLQNMERSVGAVASAAN
DLCRVAAAIAAEDLGNGSETRMTALVEGAARRALRCPYARVEYVSEPRFP
TTSRVFDGGWREGNGGGFGRYSVESKEDPAAVFADKKWPGATMRIPVLVP
QSGADEALVLSICSEDQSRMFVDEDDVLASALAACLGTAILASRARRRVR
ELAEETDADLEVRREREQAANAAATADAAEARCRAERAAADTRALITTAR
GLKAQAESAAAACRRAERQTEALWHLLVGLHSARRDHAAIATAVTERAVA
VVPACERAVLLTPRQGRRWEKMPEATEDRDRANFFSPDPRVWASAASGKR
GRRSERGGRSGVGKGWAGTIERAALKAVAEGKTVCVRDRFDGATVSPQRV
FCFSPLSQSAMTPQPGRYSRAERGSENVRPKGGDQIDRVDQTGSDADGSC
SAVCAIAWVLRLNKTVARVGSHPIDVEPVAAWSLPPLPERVSTVIEVVGL
AVSLALFAPSDKLSGALARRYACADISTRSQEGSRDHEMKRRREKESRDA
ELERLRRETAALASRVQTLECKAAGLRASEARSSSALARAEADAMAAKGE
LELVALERDR
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