prot_H-elongata_contig83907.16002.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig83907.16002.1
Unique Nameprot_H-elongata_contig83907.16002.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length235
Homology
BLAST of mRNA_H-elongata_contig83907.16002.1 vs. uniprot
Match: D7FQB3_ECTSI (Glucosidase 2 subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB3_ECTSI)

HSP 1 Score: 275 bits (703), Expect = 3.350e-84
Identity = 146/229 (63.76%), Postives = 173/229 (75.55%), Query Frame = 0
Query:    5 RYPTLRWLVTSWDMFLSPEGSGRFLMVMWDAPVALWGLLFPELDVEHQRPEAAMLREGIARAKESLRQRGEERNGIAQAAGKRGKGGRRKREETEARRLLDLDLGKDSGFAALAEKCLDLQQGGYVYSLCPFKEAKQDKHSLGKWKGWAPR---RNRRDHDYRAMLFDGGSRCHNKKQRSAEVLVECGPHDALVAAEELEIGVYRLAMETPLACTEGNVREAEQRLEVF 230
            RYPTLR +V  WD FL   G+G+ L+VMWDAPVALW   FP  D +H+RPEAAMLREGIARA+  L+++  +  G       RG  G+R+REE+EA+RL  LDLG+ S FAALAEKCLDL++GGY+YSLCPFKEAKQDKHSLG+W+GW P    R  R  D R MLFDGGSRCHN KQRS EV V+CG  DALVAAEE+EIG YRL +ETPLACTE ++ EAE+ LE  
Sbjct:  517 RYPTLRSVVLHWDEFL--HGNGKSLLVMWDAPVALWDFCFPYRDDKHERPEAAMLREGIARARAILQEKKPDTAG-------RGGRGKRRREESEAKRLSGLDLGEGSRFAALAEKCLDLEEGGYLYSLCPFKEAKQDKHSLGRWRGWGPGGRGRAGRGRD-RVMLFDGGSRCHNNKQRSCEVSVQCGSEDALVAAEEIEIGTYRLRLETPLACTEAHLAEAERGLEAL 735          
BLAST of mRNA_H-elongata_contig83907.16002.1 vs. uniprot
Match: A0A6H5JF29_9PHAE (MRH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF29_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 1.410e-79
Identity = 142/232 (61.21%), Postives = 164/232 (70.69%), Query Frame = 0
Query:    5 RYPTLRWLVTSWDMFLSPEGSGRFLMVMWDAPVALWGLLFPELDVEHQRPEAAMLREGIARAKESLRQRGEERNGIAQAAGKRGKGGRRKREETEARRLLDLDLGKDSGFAALAEKCLDLQQGGYVYSLCPFKEAKQDKHSLGKWKGWA------PRRNRRDHDYRAMLFDGGSRCHNKKQRSAEVLVECGPHDALVAAEELEIGVYRLAMETPLACTEGNVREAEQRLEVF 230
            RYPTLR +V  WD FL   G+G+FL+VMWDAPVALW   FP  D E++RPEAAMLREGIARA+  L++R  +  G                EE+EA+RL  LDLG+ S FAALA KCLDL++GGY+YSLCPFK+AKQDKHSLG+W+GW       P R R     R MLFDGGSRCHNK QRS EV VECGP DALVAAEE+EIG Y L +ETPLACTE +V EAE  LE  
Sbjct:  271 RYPTLRSVVLRWDEFL--HGNGKFLLVMWDAPVALWDFCFPYRDDEYERPEAAMLREGIARARAILQERKPDTAGGXXXXXXXX-------EESEAKRLSGLDLGEGSRFAALAGKCLDLEEGGYLYSLCPFKDAKQDKHSLGRWRGWGTGGRGLPGRGRN----RVMLFDGGSRCHNK-QRSCEVSVECGPEDALVAAEEIEIGTYHLRLETPLACTEAHVAEAELGLEAL 488          
BLAST of mRNA_H-elongata_contig83907.16002.1 vs. uniprot
Match: K3X1Z1_GLOUD (Glucosidase 2 subunit beta n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1Z1_GLOUD)

HSP 1 Score: 101 bits (251), Expect = 6.130e-21
Identity = 61/194 (31.44%), Postives = 95/194 (48.97%), Query Frame = 0
Query:   31 VMWDAPVALWGLLFPELDVEHQRPEAAMLREGIARAKESLRQRGEERNGIAQAAGKRGKGGRRKREETEARRLLDLDLGKDSGFAALAEKCLDLQQGGYVYSLCPFKEAKQDKHSLGKWKGWAPRRNRRDHDYRAMLFDGGSRCHNKKQRSAEVLVECGPHDALVAAEELEIGVYRLAMETPLACTEGNVREAE 224
            V WDAP+  +  LFP+L+      EA  LR+ +      + +    R+   +AA K                    D G +  F AL ++C++ +   Y Y LC F++ KQD   LGKW+ W    N  D DY  M F  G +C N  +RS +V + CG  + +V+ +E    VY + ++TPLACT+  + +A+
Sbjct:  440 VAWDAPIFAYNYLFPQLNDSVVSREAESLRKVMQEIDADIEKLTRARDEKREAAAK--------------------DYGPERAFFALNDQCIEKKIEKYTYKLCAFRDVKQDYTLLGKWEAWGSADNG-DKDYARMQFIKGQKCWNGPERSVQVRLACGQENEIVSVDEPSTCVYEMLLQTPLACTQDVLAQAQ 612          
BLAST of mRNA_H-elongata_contig83907.16002.1 vs. uniprot
Match: A0A137NYP4_CONC2 (Glucosidase 2 subunit beta (Fragment) n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137NYP4_CONC2)

HSP 1 Score: 78.6 bits (192), Expect = 3.460e-13
Identity = 45/128 (35.16%), Postives = 65/128 (50.78%), Query Frame = 0
Query:   94 KREETEARRLLDLDLGKDSGFAALAEKCLDLQQGGYVYSLCPFKEAKQ------DKHSLGKWKGWAPRRNRRDHDYRAMLFDGGSRCHNKKQRSAEVLVECGPHDALVAAEELEIGVYRLAMETPLAC 215
            KRE  +    L+ D+G D  ++AL++KC +L  G YVYS+C F EA Q      D  SLG +  W         DY A L+  G+ C N   RS ++ + CG  + + +  E     Y ++M TP AC
Sbjct:  331 KRELDDLNTKLNRDMGPDGEYSALSDKCFELDNGEYVYSVCMFGEANQKSNKNHDSVSLGHFSEWVGT------DYSAQLYSNGTPCWNGPSRSVKLNLICGTEEKVTSVTEPSKCEYHISMLTPAAC 452          
BLAST of mRNA_H-elongata_contig83907.16002.1 vs. uniprot
Match: A0A0N4UFS2_DRAME (PRKCSH_1 domain-containing protein n=1 Tax=Dracunculus medinensis TaxID=318479 RepID=A0A0N4UFS2_DRAME)

HSP 1 Score: 63.9 bits (154), Expect = 2.960e-9
Identity = 37/124 (29.84%), Postives = 53/124 (42.74%), Query Frame = 0
Query:   98 TEARRLLDLDLGKDSGFAALAEKCLDLQQGGYVYSLCPFKEAKQ------DKHSLGKWKGWAPRRNRRDHDYRAMLFDGGSRCHNKKQRSAEVLVECGPHDALVAAEELEIGVYRLAMETPLAC 215
            +E    L  D   D  +  L  KCL++ +G Y+Y LC F +A Q       + +LG W  W+             +++ G  C N   RSA + VECG    L+   E     Y   + TP AC
Sbjct:   15 SEVADFLKDDFDTDLAWMPLKNKCLEINEGHYIYKLCLFDKASQIDSGGGPEINLGTWSKWSSGTA----GVGMQIYERGQSCWNGPDRSAHITVECGEDTKLIEVSEPSKCEYHFVLHTPAAC 134          
BLAST of mRNA_H-elongata_contig83907.16002.1 vs. uniprot
Match: A0A4T0FRZ6_9BASI (Glucosidase 2 subunit beta n=1 Tax=Wallemia hederae TaxID=1540922 RepID=A0A4T0FRZ6_9BASI)

HSP 1 Score: 62.0 bits (149), Expect = 1.850e-7
Identity = 38/123 (30.89%), Postives = 58/123 (47.15%), Query Frame = 0
Query:  109 GKDSGFAALAEKCLDLQQGGYVYSLCPFK---EAKQDKHS----LGKWKGWAPRRNRRDHD-YRAMLFDGGSRCHNKKQRSAEVLVECGPHDALVAAEELEIGVYRLAMETPLACTEGNVREA 223
            G+   + AL ++C+      Y Y LC F    + +QD+ S    LG++  W         D Y    +  G RC N  +RS EV + CG H+ALV  EE E   Y+    +P AC + +  ++
Sbjct:  786 GRQGEWNALNKECVTQDVAEYTYELCFFDRVMQRQQDRKSGGTSLGRFASWNENAEAGSDDFYSTQSYTKGQRCWNGPERSTEVEIICGEHNALVEVEEQEKCAYKFLATSPAACHDSSTAQS 908          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig83907.16002.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FQB3_ECTSI3.350e-8463.76Glucosidase 2 subunit beta n=1 Tax=Ectocarpus sili... [more]
A0A6H5JF29_9PHAE1.410e-7961.21MRH domain-containing protein n=1 Tax=Ectocarpus s... [more]
K3X1Z1_GLOUD6.130e-2131.44Glucosidase 2 subunit beta n=1 Tax=Globisporangium... [more]
A0A137NYP4_CONC23.460e-1335.16Glucosidase 2 subunit beta (Fragment) n=1 Tax=Coni... [more]
A0A0N4UFS2_DRAME2.960e-929.84PRKCSH_1 domain-containing protein n=1 Tax=Dracunc... [more]
A0A4T0FRZ6_9BASI1.850e-730.89Glucosidase 2 subunit beta n=1 Tax=Wallemia hedera... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 213..233
NoneNo IPR availableSUPERFAMILY50911Mannose 6-phosphate receptor domaincoord: 132..215
IPR036607Glucosidase 2 subunit beta-likePFAMPF13015PRKCSH_1coord: 96..220
e-value: 7.7E-14
score: 51.7
IPR009011Mannose-6-phosphate receptor binding domain superfamilyGENE3D2.70.130.10coord: 114..215
e-value: 7.4E-21
score: 76.2
IPR039794Glucosidase II beta subunit-likePANTHERPTHR12630N-LINKED OLIGOSACCHARIDE PROCESSINGcoord: 93..218
IPR026874Glucosidase 2 subunit betaPANTHERPTHR12630:SF1GLUCOSIDASE 2 SUBUNIT BETAcoord: 93..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig83907contigH-elongata_contig83907:1011..2621 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig83907.16002.1mRNA_H-elongata_contig83907.16002.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig83907 1011..2621 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig83907.16002.1 ID=prot_H-elongata_contig83907.16002.1|Name=mRNA_H-elongata_contig83907.16002.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=235bp
MIRHRYPTLRWLVTSWDMFLSPEGSGRFLMVMWDAPVALWGLLFPELDVE
HQRPEAAMLREGIARAKESLRQRGEERNGIAQAAGKRGKGGRRKREETEA
RRLLDLDLGKDSGFAALAEKCLDLQQGGYVYSLCPFKEAKQDKHSLGKWK
GWAPRRNRRDHDYRAMLFDGGSRCHNKKQRSAEVLVECGPHDALVAAEEL
EIGVYRLAMETPLACTEGNVREAEQRLEVFQVRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036607PRKCSH
IPR009011Man6P_isomerase_rcpt-bd_dom_sf
IPR039794Gtb1-like
IPR026874Glucosidase_2_bsu