prot_H-elongata_contig8339.15977.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8339.15977.1
Unique Nameprot_H-elongata_contig8339.15977.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length395
Homology
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BLAST of mRNA_H-elongata_contig8339.15977.1 vs. uniprot
Match: D7G122_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G122_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 1.580e-6
Identity = 28/65 (43.08%), Postives = 47/65 (72.31%), Query Frame = 0 
Query:    6 YKGDKRIRSANVWVNGVFECTITSSGTTTDYETYELIAPGTTTVMLQAADTNDNGWLSITEVKFI 70
            YKGD+R+R+  +  +  FE TITSSGT++ YET+++    T  + ++A + +D+ W+SITEV+F+
Sbjct:   82 YKGDERVRTLKLKGSDGFEKTITSSGTSSKYETWDINTDETKWLSMEALNLDDDEWISITEVRFM 146
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8339.15977.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G122_ECTSI1.580e-643.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8339contigH-elongata_contig8339:4796..7502 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8339.15977.1mRNA_H-elongata_contig8339.15977.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8339 4173..7718 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8339.15977.1 ID=prot_H-elongata_contig8339.15977.1|Name=mRNA_H-elongata_contig8339.15977.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=395bp
MDMALYKGDKRIRSANVWVNGVFECTITSSGTTTDYETYELIAPGTTTVM
LQAADTNDNGWLSITEVKFIEGHAAPTPSPITMPTWIAPPTILSPSSIPS
PTTVDDDDFSLTPTISTPTTAALPPVLEFAGLPDIVFEAVLEDAPYGLAN
GVIRSDQYGIVLDPEDEGIAQFTGTVSLFDDEQASLAESITLYYYVYSDL
DDPVTDFTRGVGEVDPSTGIFSATVSVPNGKSKVVLSFVVLDEADSTSNE
YPDTVSVNDVLNDCGESYFTVTLEEWDNEEQYLYMIVREPNGYGGSPGSF
QVNGVIISEPFGVYGTQTYRLYNGLPSDQDGVLGDYLVYVNREFQSQDDT
NWNIIVRVNGEVVQEVSGLFAIGGESSPDSFTYTLDSYMSIADC*
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