prot_H-elongata_contig83371.15976.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig83371.15976.1
Unique Nameprot_H-elongata_contig83371.15976.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length68
Homology
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BLAST of mRNA_H-elongata_contig83371.15976.1 vs. uniprot
Match: D7G4J0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4J0_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 3.210e-24
Identity = 53/68 (77.94%), Postives = 58/68 (85.29%), Query Frame = 0 
Query:    1 SLPVLLVDLGRVCGFRLAGAEEAEAVGKGVRAALHKSFRERSEELFETGSAVHADTRTLAEVMRKGRE 68
            S+PVLLVDL RVCGFR+ GAEEA+ VG  VRAALH+SF ERSEELFETGSAVHADT TLAE MR+  E
Sbjct:  331 SVPVLLVDLARVCGFRVKGAEEADIVGGKVRAALHESFAERSEELFETGSAVHADTSTLAEEMRRRSE 398
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BLAST of mRNA_H-elongata_contig83371.15976.1 vs. uniprot
Match: A0A6H5JAG3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAG3_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 1.350e-22
Identity = 51/68 (75.00%), Postives = 56/68 (82.35%), Query Frame = 0 
Query:    1 SLPVLLVDLGRVCGFRLAGAEEAEAVGKGVRAALHKSFRERSEELFETGSAVHADTRTLAEVMRKGRE 68
            S+PVLLVDL RVCGF + GAEEA  VG  VRAALH+SF ERSEELF+TGSAVHADT TLAE MR+  E
Sbjct:  332 SVPVLLVDLARVCGFHVKGAEEAGIVGGKVRAALHESFAERSEELFDTGSAVHADTSTLAEEMRRRSE 399
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig83371.15976.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4J0_ECTSI3.210e-2477.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JAG3_9PHAE1.350e-2275.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig83371contigH-elongata_contig83371:2377..2580 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig83371.15976.1mRNA_H-elongata_contig83371.15976.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig83371 2377..2580 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig83371.15976.1 ID=prot_H-elongata_contig83371.15976.1|Name=mRNA_H-elongata_contig83371.15976.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=68bp
SLPVLLVDLGRVCGFRLAGAEEAEAVGKGVRAALHKSFRERSEELFETGS
AVHADTRTLAEVMRKGRE
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