prot_H-elongata_contig83033.15938.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig83033.15938.1
Unique Name	prot_H-elongata_contig83033.15938.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	106

Homology

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BLAST of mRNA_H-elongata_contig83033.15938.1 vs. uniprot
Match: A0A6H5J907_9PHAE (G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J907_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 3.960e-53
Identity = 89/106 (83.96%), Postives = 97/106 (91.51%), Query Frame = 0

Query:    1 MICAGVLPIMQMRNAMPPMTLIAKRIPRHILELTYTIKLPVLPENAKDVQGKLVLSPQQLLEAYCQARGMFRARALGESDMPRAARQILKDYTDGRLLFCHPPAGL 106
            MICAGVLPIMQMRN MPPM LIA+RIPRHILE+TYTIKLPVLP + +D  G  +LSPQQLLE+YCQARG+FRARALGESDMPRAARQILKD+TDGRLLFCHPPA L
Sbjct:  452 MICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLPGDVRDTAGNAMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADL 557

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BLAST of mRNA_H-elongata_contig83033.15938.1 vs. uniprot
Match: A0A835YPB7_9STRA (Lsg1, cytoplasmic GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPB7_9STRA)

HSP 1 Score: 112 bits (279), Expect = 1.600e-26
Identity = 59/122 (48.36%), Postives = 76/122 (62.30%), Query Frame = 0

Query:    1 MICAGVLPIMQMRNAMPPMTLIAKRIPRHILELTYTIKLPVLPENAKDVQGK-------------LVLSPQ---QLLEAYCQARGMFRARALGESDMPRAARQILKDYTDGRLLFCHPPAGL 106
            MICAGVLPIMQMR+A+ P+ L+A+R+PRHILELTYTI                            L   P    ++L A+C++RG++R   LG+ D+PRAAR +LKDYT+G LLFCHPP  L
Sbjct:  469 MICAGVLPIMQMRDALAPIALVARRVPRHILELTYTIXXXXXXXXXXXXXXXXXXXXXXXXXXXALATRPPTATEVLTAFCESRGLYRPGGLGDYDLPRAARMLLKDYTEGTLLFCHPPPDL 590

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BLAST of mRNA_H-elongata_contig83033.15938.1 vs. uniprot
Match: A0A7S2V0G3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0G3_9STRA)

HSP 1 Score: 102 bits (253), Expect = 8.940e-24
Identity = 57/108 (52.78%), Postives = 72/108 (66.67%), Query Frame = 0

Query:    1 MICAGVLPIMQMRNAMPPMTLIAKRIPRHILELTYTIKLPVLPENAKDVQGK-LVLSPQQLLEAYCQARGMFRARALGESDMPRAARQILKDYTDGR-LLFCHPPAGL 106
            MICAGVLPI QMR    P+ LIA RIPRHI ELTYT++ P   E  ++  G+   L+  +LLE +CQ R  F   A G+ D  RA+R +L+DYT+G+ LLFCHPP  L
Sbjct:  102 MICAGVLPINQMREHRGPVGLIASRIPRHIFELTYTLRFPREGEEEEEAAGEGRPLTATELLEVFCQTRHYFMG-ASGQVDEQRASRYLLQDYTEGKVLLFCHPPPSL 208

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BLAST of mRNA_H-elongata_contig83033.15938.1 vs. uniprot
Match: A0A7N4NQJ5_SARHA (Large 60S subunit nuclear export GTPase 1 n=3 Tax=Sarcophilus harrisii TaxID=9305 RepID=A0A7N4NQJ5_SARHA)

HSP 1 Score: 99.4 bits (246), Expect = 4.550e-22
Identity = 53/106 (50.00%), Postives = 70/106 (66.04%), Query Frame = 0

Query:    1 MICAGVLPIMQMRNAMPPMTLIAKRIPRHILELTYTIKLPVLPENAKDVQGKLVLSPQQLLEAYCQARGMFRARALGESDMPRAARQILKDYTDGRLLFCHPPAGL 106
            MIC G+LPI QMR+ +PP++LI + IPRH+LE TY I + + P   +D     V + ++LL AY   RG   A   G+ D PRAAR ILKDY  G+LL+CHPP G+
Sbjct:  510 MICCGILPIDQMRDHVPPISLICQNIPRHVLEATYGIHI-IRPREDEDPNR--VPTSEELLTAYGSMRGFMTAH--GQPDQPRAARYILKDYVRGKLLYCHPPPGI 610

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BLAST of mRNA_H-elongata_contig83033.15938.1 vs. uniprot
Match: UPI001CF0D9A7 (large subunit GTPase 1 homolog n=2 Tax=Bufo TaxID=8383 RepID=UPI001CF0D9A7)

HSP 1 Score: 98.6 bits (244), Expect = 8.320e-22
Identity = 53/106 (50.00%), Postives = 74/106 (69.81%), Query Frame = 0

Query:    1 MICAGVLPIMQMRNAMPPMTLIAKRIPRHILELTYTIKLPVLPENAKDVQGKLVLSPQQLLEAYCQARGMFRARALGESDMPRAARQILKDYTDGRLLFCHPPAGL 106
            MIC+G+LPI QMR+ +PP++LIA+RIPRH++E  Y I + + P   +D Q +   S ++LL AY   RG   A   G+ D PR+AR ILKDY +G+LL+CHPP G+
Sbjct:  431 MICSGILPIDQMRDHVPPISLIAQRIPRHVVESIYGINI-IRPREDED-QDRAPTS-EELLAAYGYMRGFMTAH--GQPDQPRSARYILKDYVNGKLLYCHPPPGI 531

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BLAST of mRNA_H-elongata_contig83033.15938.1 vs. uniprot
Match: A0A822IB49_9NEOB ((mimic poison frog) hypothetical protein n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A822IB49_9NEOB)

HSP 1 Score: 98.2 bits (243), Expect = 1.130e-21
Identity = 53/106 (50.00%), Postives = 75/106 (70.75%), Query Frame = 0

Query:    1 MICAGVLPIMQMRNAMPPMTLIAKRIPRHILELTYTIKLPVLPENAKDVQGKLVLSPQQLLEAYCQARGMFRARALGESDMPRAARQILKDYTDGRLLFCHPPAGL 106
            MIC+G+LPI QMR+ +PP++LIA+RIPR+++E TY I + + P   +D Q +   S ++LL AY   RG   A   G+ D PR+AR ILKDY +G+LL+CHPP G+
Sbjct:  426 MICSGILPIDQMRDHVPPISLIAQRIPRNVVEATYGINI-IRPREDED-QDRAPTS-EELLAAYGYMRGFMTAH--GQPDQPRSARYILKDYVNGKLLYCHPPPGV 526

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BLAST of mRNA_H-elongata_contig83033.15938.1 vs. uniprot
Match: UPI00115D25FF (large subunit GTPase 1 homolog n=1 Tax=Manacus vitellinus TaxID=328815 RepID=UPI00115D25FF)

HSP 1 Score: 97.1 bits (240), Expect = 1.960e-21
Identity = 50/106 (47.17%), Postives = 72/106 (67.92%), Query Frame = 0

Query:    1 MICAGVLPIMQMRNAMPPMTLIAKRIPRHILELTYTIKLPVLPENAKDVQGKLVLSPQQLLEAYCQARGMFRARALGESDMPRAARQILKDYTDGRLLFCHPPAGL 106
            MIC+G+LPI QMR+ +PP++L+ + IPR+ILE TY I + + P   +D   K   + ++LL AY   RG   A   G+ D PR+AR +LKDY +G+LL+CHPP G+
Sbjct:  250 MICSGILPIDQMRDHVPPISLVCQHIPRNILEATYGISI-IRPREDEDPDRKP--TAEELLTAYGYMRGFMTAH--GQPDQPRSARYVLKDYVNGKLLYCHPPPGI 350

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BLAST of mRNA_H-elongata_contig83033.15938.1 vs. uniprot
Match: UPI000511930E (large subunit GTPase 1 homolog n=1 Tax=Nipponia nippon TaxID=128390 RepID=UPI000511930E)

HSP 1 Score: 97.4 bits (241), Expect = 2.120e-21
Identity = 52/106 (49.06%), Postives = 71/106 (66.98%), Query Frame = 0

Query:    1 MICAGVLPIMQMRNAMPPMTLIAKRIPRHILELTYTIKLPVLPENAKDVQGKLVLSPQQLLEAYCQARGMFRARALGESDMPRAARQILKDYTDGRLLFCHPPAGL 106
            MIC+G+LPI QMR+ +PP++LI + IPR+ILE TY I + + P   +D   K   S ++LL AY   RG   A   G+ D PR+AR +LKDY  G+LL+CHPP G+
Sbjct:  431 MICSGILPIDQMRDHVPPISLICQHIPRNILEATYGINI-IRPREDEDPDRKP--SAEELLTAYGCMRGFMTAH--GQPDQPRSARYVLKDYVSGKLLYCHPPPGI 531

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BLAST of mRNA_H-elongata_contig83033.15938.1 vs. uniprot
Match: A0A0C9ZWC4_9AGAM (Unplaced genomic scaffold scaffold_3, whole genome shotgun sequence (Fragment) n=1 Tax=Pisolithus microcarpus 441 TaxID=765257 RepID=A0A0C9ZWC4_9AGAM)

HSP 1 Score: 95.9 bits (237), Expect = 2.610e-21
Identity = 51/106 (48.11%), Postives = 67/106 (63.21%), Query Frame = 0

Query:    1 MICAGVLPIMQMRNAMPPMTLIAKRIPRHILELTYTIKLPVLPENAKDVQGKLVLSPQQLLEAYCQARGMFRARALGESDMPRAARQILKDYTDGRLLFCHPPAGL 106
            ++C GVLPI QMR    P+ L+AKR+P+ +LE TY + + V     K+  G   ++ + LL AY  ARG  R+   G  D  RAAR ILKDY  G+LLFCHPPAG+
Sbjct:  123 LVCDGVLPIDQMREYTGPVALVAKRVPKEVLEATYGLSIRV---RGKEEGGDGRIAAEDLLVAYASARGFMRS-GQGNPDEARAARYILKDYVSGKLLFCHPPAGV 224

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BLAST of mRNA_H-elongata_contig83033.15938.1 vs. uniprot
Match: UPI0005118766 (large subunit GTPase 1 homolog n=4 Tax=Neognathae TaxID=8825 RepID=UPI0005118766)

HSP 1 Score: 96.7 bits (239), Expect = 2.720e-21
Identity = 50/106 (47.17%), Postives = 71/106 (66.98%), Query Frame = 0

Query:    1 MICAGVLPIMQMRNAMPPMTLIAKRIPRHILELTYTIKLPVLPENAKDVQGKLVLSPQQLLEAYCQARGMFRARALGESDMPRAARQILKDYTDGRLLFCHPPAGL 106
            MIC+G+LPI QMR+ +PP++L+ + IPR+ILE TY I + + P   +D   K   + ++LL AY   RG   A   G+ D PR+AR +LKDY  G+LL+CHPP G+
Sbjct:  251 MICSGILPIDQMRDHVPPISLVCQHIPRNILEATYGINI-IRPREDEDPDRKP--TAEELLTAYGYMRGFMTAH--GQPDQPRSARYVLKDYVSGKLLYCHPPPGI 351

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig83033.15938.1 vs. uniprot

BLAST of mRNA_H-elongata_contig83033.15938.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5J907_9PHAE	3.960e-53	83.96	G domain-containing protein n=2 Tax=Ectocarpus Tax...	[more]
A0A835YPB7_9STRA	1.600e-26	48.36	Lsg1, cytoplasmic GTPase n=1 Tax=Tribonema minus T...	[more]
A0A7S2V0G3_9STRA	8.940e-24	52.78	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A7N4NQJ5_SARHA	4.550e-22	50.00	Large 60S subunit nuclear export GTPase 1 n=3 Tax=...	[more]
UPI001CF0D9A7	8.320e-22	50.00	large subunit GTPase 1 homolog n=2 Tax=Bufo TaxID=...	[more]
A0A822IB49_9NEOB	1.130e-21	50.00	(mimic poison frog) hypothetical protein n=1 Tax=R...	[more]
UPI00115D25FF	1.960e-21	47.17	large subunit GTPase 1 homolog n=1 Tax=Manacus vit...	[more]
UPI000511930E	2.120e-21	49.06	large subunit GTPase 1 homolog n=1 Tax=Nipponia ni...	[more]
A0A0C9ZWC4_9AGAM	2.610e-21	48.11	Unplaced genomic scaffold scaffold_3, whole genome...	[more]
UPI0005118766	2.720e-21	47.17	large subunit GTPase 1 homolog n=4 Tax=Neognathae ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR45709	FAMILY NOT NAMED	coord: 1..104
None	No IPR available	PANTHER	PTHR45709:SF2	LARGE SUBUNIT GTPASE 1 HOMOLOG	coord: 1..104

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig83033	contig	H-elongata_contig83033:375..692 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig83033.15938.1	mRNA_H-elongata_contig83033.15938.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig83033 369..692 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig83033.15938.1 ID=prot_H-elongata_contig83033.15938.1|Name=mRNA_H-elongata_contig83033.15938.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=106bp
MICAGVLPIMQMRNAMPPMTLIAKRIPRHILELTYTIKLPVLPENAKDVQ
GKLVLSPQQLLEAYCQARGMFRARALGESDMPRAARQILKDYTDGRLLFC
HPPAGL