prot_H-elongata_contig82999.15935.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig82999.15935.1
Unique Nameprot_H-elongata_contig82999.15935.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length189
Homology
BLAST of mRNA_H-elongata_contig82999.15935.1 vs. uniprot
Match: D7FXR7_ECTSI (S-adenosyl-methyltransferase MraW n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR7_ECTSI)

HSP 1 Score: 210 bits (534), Expect = 2.580e-64
Identity = 125/219 (57.08%), Postives = 145/219 (66.21%), Query Frame = 0
Query:    1 KAERGRFQAIRSNFADVGKAVRGCQLLRARTQEPAAAXXXXANDDVSRESGHDSAEVSPLVDGILVDLGVSSHQINERNRGFSFSSDGPLDMRMEG-----------------ASSRMEGDPAVDGADFGRR-------------NAADVVNFADEVDVREMVWRYGEEKRSTKIARAIVESRPITTTGHLAEVVGRCAPPKDRTKTLARVFQALRIEV 189
            +AE GRFQA+RSNFA VG+AVR C+L+    Q+P  A         +      +    PLVDGILVDLGVSSHQI++  RGFSFS+DGPLDMRMEG                 ++SR   D AV+    G               +AADVVNFADE ++REMVWRYG+EKRSTKIARAIVE+RPI TTG LAEVVGRCAPPK+R KTLARVFQALRIEV
Sbjct:   62 EAEVGRFQAVRSNFAAVGRAVRECELM---LQQPPLAPEASTAPAPAAGVPPRTTSAGPLVDGILVDLGVSSHQIDDEARGFSFSADGPLDMRMEGTGDGDSVGERSGFGGVASTSREHEDRAVEKGGRGEGXXXXXXXXXXXXVSAADVVNFADESEIREMVWRYGDEKRSTKIARAIVENRPIATTGQLAEVVGRCAPPKERVKTLARVFQALRIEV 277          
BLAST of mRNA_H-elongata_contig82999.15935.1 vs. uniprot
Match: A0A6H5J8S8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8S8_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 1.280e-52
Identity = 127/272 (46.69%), Postives = 145/272 (53.31%), Query Frame = 0
Query:    1 KAERGRFQAIRSNFADVGKAVRGCQLLRARTQEPAAAXXXXANDDVSRESGHD-----------------------------------------------------SAEVSPLVDGILVDLGVSSHQINERNRGFSFSSDGPLDMRMEGA-----------------SSRMEGDPAVD------GADF-------GRRNAADVVNFADEVDVREMVWRYGEEKRSTKIARAIVESRPITTTGHLAEVVGRCAPPKDRTKTLARVFQALRIEV 189
            +AE GRFQA+RSNFADVGKAVR C+LL    Q+P       +                                                                +    PLVDGILVDLGVSSHQI++  RGFSFS+DGPLDMRMEG                  +S    D AV+      G D        G  +AADVVN+ADE ++REMVWRYG+EKRSTKIARAIVE+RPI TTG LAEVVGRCAPPK+R KTLARVFQALRIEV
Sbjct:  438 EAEAGRFQAVRSNFADVGKAVRECELL---LQQPPLVPEAESPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPRTTSAGPLVDGILVDLGVSSHQIDDGARGFSFSADGPLDMRMEGTGDGDSAGERSWFGGVAPTSTKHEDRAVEKGGRAGGGDXXXXRGSGGGISAADVVNYADESEIREMVWRYGDEKRSTKIARAIVENRPIATTGQLAEVVGRCAPPKERVKTLARVFQALRIEV 706          
BLAST of mRNA_H-elongata_contig82999.15935.1 vs. uniprot
Match: A0A835Z182_9STRA (Ribosomal RNA small subunit methyltransferase H n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z182_9STRA)

HSP 1 Score: 133 bits (334), Expect = 1.680e-34
Identity = 80/189 (42.33%), Postives = 113/189 (59.79%), Query Frame = 0
Query:    2 AERGRFQAIRSNFADVGKAVRGCQLLRARTQEPAAAXXXXANDDVSRESGHDSAEVSP-LVDGILVDLGVSSHQINERNRGFSFSSDGPLDMRMEGASSRMEGDPAVDGADFGRRNAADVVNFADEVDVREMVWRYGEEKRSTKIARAIVESRPITTTGHLAEVVGRCAPPKDRTKTLARVFQALRIEV 189
            A+ GRF A+R+NF+   +A++ C LL+  +  P+           S  SG     + P  VDG+L+DLGVSSHQ++   RGFS+S+DGPLDMRM GA+ +               +AAD+ N  DE  + +++++ GEEKRS +IA AIV +RP+ TT  LA  V    P  +  K+L RVFQALRI+V
Sbjct:   60 ADAGRFAALRTNFSGAARALQSCPLLQQHSSSPS-----------SSGSGQPQESMPPPQVDGMLLDLGVSSHQLDSAARGFSYSADGPLDMRMAGATVKA------------LHSAADLCNELDERALGDVLFQLGEEKRSRRIAAAIVRARPLATTAQLAAAVRSAVPFTEERKSLTRVFQALRIKV 225          
BLAST of mRNA_H-elongata_contig82999.15935.1 vs. uniprot
Match: A0A2T2UJS6_9BACT (Ribosomal RNA small subunit methyltransferase H n=2 Tax=unclassified Bacteroidetes TaxID=37452 RepID=A0A2T2UJS6_9BACT)

HSP 1 Score: 127 bits (319), Expect = 3.950e-32
Identity = 69/133 (51.88%), Postives = 88/133 (66.17%), Query Frame = 0
Query:   57 VSPLVDGILVDLGVSSHQINERNRGFSFSSDGPLDMRMEGASSRMEGDPAVDGADFGRRNAADVVNFADEVDVREMVWRYGEEKRSTKIARAIVESRPITTTGHLAEVVGRCAPPKDRTKTLARVFQALRIEV 189
            VS  VDG+L+DLGVSSHQI+   RGFSF  DGPLDMR + A               GRR AA +VN   E D++++ + YGEE+R+ ++ARA+ E+RP+ TTG LAEVV     P +  +TLARVFQALRI V
Sbjct:  113 VSTSVDGVLLDLGVSSHQIDAPERGFSFRKDGPLDMRFDAAR--------------GRRTAAQIVNDWTEADLKQLFYDYGEERRAPRVARAVCEARPLETTGALAEVVREAVIPPEEIQTLARVFQALRIAV 231          
BLAST of mRNA_H-elongata_contig82999.15935.1 vs. uniprot
Match: A0A2T2V5E4_9BACT (Ribosomal RNA small subunit methyltransferase H n=1 Tax=Bacteroidetes bacterium QS_8_68_28 TaxID=1919110 RepID=A0A2T2V5E4_9BACT)

HSP 1 Score: 125 bits (315), Expect = 1.560e-31
Identity = 83/187 (44.39%), Postives = 100/187 (53.48%), Query Frame = 0
Query:    3 ERGRFQAIRSNFADVGKAVRGCQLLRARTQEPAAAXXXXANDDVSRESGHDSAEVSPLVDGILVDLGVSSHQINERNRGFSFSSDGPLDMRMEGASSRMEGDPAVDGADFGRRNAADVVNFADEVDVREMVWRYGEEKRSTKIARAIVESRPITTTGHLAEVVGRCAPPKDRTKTLARVFQALRIEV 189
            E GRF A+R NFA +   V                                 A     VDG+L+DLGVSSHQI+   RGFSF  DGPLDMRM+      EG         GRR AA VVN   E D++++++ YGEE R+ +IARA+ E+RP+  TG LAE V     P D TKTLARVFQALRI V
Sbjct:   89 EAGRFVAVRGNFARLASLVEA------------------------------HAPGGGPVDGVLLDLGVSSHQIDAARRGFSFRKDGPLDMRMD-----REG---------GRRTAAQVVNDWPEDDLKQLLYDYGEEGRAPQIARAVCEARPLRGTGALAEAVRSAVIPPDETKTLARVFQALRIAV 231          
BLAST of mRNA_H-elongata_contig82999.15935.1 vs. uniprot
Match: A0A2T2V0A7_9BACT (Ribosomal RNA small subunit methyltransferase H n=1 Tax=Bacteroidetes bacterium QS_9_68_14 TaxID=1919111 RepID=A0A2T2V0A7_9BACT)

HSP 1 Score: 120 bits (302), Expect = 1.320e-29
Identity = 71/145 (48.97%), Postives = 92/145 (63.45%), Query Frame = 0
Query:   53 DSAEVSPL--------VDGILVDLGVSSHQINERNRGFSFSSDGPLDMRMEGASSRMEGDPAVDGADFGRRNAADVVNFADEVDVREMVWRYGEEKRSTKIARAIVESRPITTTGHLAEVVGRCAPPKDRTKTLARVFQALRIEV 189
            D A+++PL        VDG+L+DLGVSS Q++   RGFSF  DGPLDMRM+  S              GRR AA VV    E ++ ++++ YGEE R+ ++ARAIVE+RP+ +TG LAE V     P + TKTLARVFQALRI V
Sbjct:  103 DFAQLAPLAEEHAGAPVDGVLLDLGVSSRQLDAAERGFSFRKDGPLDMRMDRES--------------GRRTAAQVVGDWPEGELEQLLYDYGEEPRAPQVARAIVEARPLDSTGALAEAVRSATIPPEETKTLARVFQALRIAV 233          
BLAST of mRNA_H-elongata_contig82999.15935.1 vs. uniprot
Match: D0MGL6_RHOM4 (Ribosomal RNA small subunit methyltransferase H n=4 Tax=Rhodothermus marinus TaxID=29549 RepID=D0MGL6_RHOM4)

HSP 1 Score: 119 bits (298), Expect = 3.720e-29
Identity = 69/129 (53.49%), Postives = 86/129 (66.67%), Query Frame = 0
Query:   61 VDGILVDLGVSSHQINERNRGFSFSSDGPLDMRMEGASSRMEGDPAVDGADFGRRNAADVVNFADEVDVREMVWRYGEEKRSTKIARAIVESRPITTTGHLAEVVGRCAPPKDRTKTLARVFQALRIEV 189
            +DG+L+DLGVSSHQ++E  RGFSF ++GPLDMRM         DP   G       AA ++    E ++ E++ RYGEE R+ K+ARAI  +RPI TT  LAEVV R   PK+ TKTLARVFQALRI V
Sbjct:  113 IDGLLLDLGVSSHQLDEALRGFSFQAEGPLDMRM---------DPTSPGP-----TAAQLLERWSEYELAEVLRRYGEEPRARKLARAICRARPIRTTAELAEVVRREVSPKEATKTLARVFQALRIAV 227          
BLAST of mRNA_H-elongata_contig82999.15935.1 vs. uniprot
Match: A0A7V2B220_RHOMR (Ribosomal RNA small subunit methyltransferase H n=2 Tax=Bacteria TaxID=2 RepID=A0A7V2B220_RHOMR)

HSP 1 Score: 118 bits (295), Expect = 8.150e-29
Identity = 64/130 (49.23%), Postives = 87/130 (66.92%), Query Frame = 0
Query:   60 LVDGILVDLGVSSHQINERNRGFSFSSDGPLDMRMEGASSRMEGDPAVDGADFGRRNAADVVNFADEVDVREMVWRYGEEKRSTKIARAIVESRPITTTGHLAEVVGRCAPPKDRTKTLARVFQALRIEV 189
            L+DG+L+DLGVSSHQ+++  RGFSF ++GPLDMRM+ +                   A  ++      ++ E++ RYGEE R+ K+ARAI E+RP+TTT  LAE++ R  PPK+ TKTLARVFQALRI V
Sbjct:  106 LIDGLLLDLGVSSHQLDKAARGFSFQAEGPLDMRMDPSKGPT---------------AQQLLMRWSPQELAEVLRRYGEEPRAAKLARAICEARPVTTTAALAEIIRREVPPKEATKTLARVFQALRIAV 220          
BLAST of mRNA_H-elongata_contig82999.15935.1 vs. uniprot
Match: A0A848XZ50_9BACT (Ribosomal RNA small subunit methyltransferase H n=1 Tax=Rhodothermaceae bacterium TaxID=2026787 RepID=A0A848XZ50_9BACT)

HSP 1 Score: 118 bits (296), Expect = 9.410e-29
Identity = 65/129 (50.39%), Postives = 83/129 (64.34%), Query Frame = 0
Query:   61 VDGILVDLGVSSHQINERNRGFSFSSDGPLDMRMEGASSRMEGDPAVDGADFGRRNAADVVNFADEVDVREMVWRYGEEKRSTKIARAIVESRPITTTGHLAEVVGRCAPPKDRTKTLARVFQALRIEV 189
            VDG+L+DLG+SSHQI+E  RGF+FS+DGPLDMRM  A+                  AAD++N  D   + +++  YGEE R+  IA AIVE RP+ TTG LA+ V    P ++  KTLARVFQALRI V
Sbjct:  126 VDGVLLDLGISSHQIDEAARGFAFSADGPLDMRMNAAAPET---------------AADLINTLDVQALTDLLRAYGEEPRAWPIANAIVEQRPLATTGDLADAVRSAVPTREEVKTLARVFQALRIAV 239          
BLAST of mRNA_H-elongata_contig82999.15935.1 vs. uniprot
Match: A0A0M0J7W8_9EUKA (Ribosomal RNA small subunit methyltransferase h n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J7W8_9EUKA)

HSP 1 Score: 117 bits (294), Expect = 3.740e-28
Identity = 72/150 (48.00%), Postives = 94/150 (62.67%), Query Frame = 0
Query:   58 SPLVDGILVDLGVSSHQINERNRGFSFSSDGPLDMRM------EGASSRMEGDPAVD----GADFGRR----NAADVVNFADEVDVREMVWRYGEEKRSTKIARAIVESRPITTTGHLAEVVGRCAP----PKDRTKTLARVFQALRIEV 189
            +PL+DG+L+DLGVSSHQ+NE +RGFSF  DGPLDMRM       G  S   GD  V      A+  RR     AA +VN  DE  + +++W+YGEE+ S +IAR+IV +RP+ +T  L EV+         PK+    L+RVFQALRIEV
Sbjct:  132 APLLDGMLLDLGVSSHQLNEPSRGFSFMRDGPLDMRMAQTATASGTDSNSSGDGGVRLDVRDAERARRAEPLTAATIVNQWDEKALADVLWKYGEERESRRIARSIVAARPLHSTAELVEVLKTAGTKNYEPKEVRNRLSRVFQALRIEV 281          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig82999.15935.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXR7_ECTSI2.580e-6457.08S-adenosyl-methyltransferase MraW n=1 Tax=Ectocarp... [more]
A0A6H5J8S8_9PHAE1.280e-5246.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z182_9STRA1.680e-3442.33Ribosomal RNA small subunit methyltransferase H n=... [more]
A0A2T2UJS6_9BACT3.950e-3251.88Ribosomal RNA small subunit methyltransferase H n=... [more]
A0A2T2V5E4_9BACT1.560e-3144.39Ribosomal RNA small subunit methyltransferase H n=... [more]
A0A2T2V0A7_9BACT1.320e-2948.97Ribosomal RNA small subunit methyltransferase H n=... [more]
D0MGL6_RHOM43.720e-2953.49Ribosomal RNA small subunit methyltransferase H n=... [more]
A0A7V2B220_RHOMR8.150e-2949.23Ribosomal RNA small subunit methyltransferase H n=... [more]
A0A848XZ50_9BACT9.410e-2950.39Ribosomal RNA small subunit methyltransferase H n=... [more]
A0A0M0J7W8_9EUKA3.740e-2848.00Ribosomal RNA small subunit methyltransferase h n=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023397S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamilyGENE3D1.10.150.170coord: 78..189
e-value: 4.3E-27
score: 96.7
IPR023397S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamilySUPERFAMILY81799Putative methyltransferase TM0872, insert domaincoord: 79..189
IPR002903Ribosomal RNA small subunit methyltransferase HPFAMPF01795Methyltransf_5coord: 54..189
e-value: 8.9E-32
score: 110.8
IPR002903Ribosomal RNA small subunit methyltransferase HPANTHERPTHR11265S-ADENOSYL-METHYLTRANSFERASE MRAWcoord: 5..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig82999contigH-elongata_contig82999:94..1577 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig82999.15935.1mRNA_H-elongata_contig82999.15935.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig82999 94..1577 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig82999.15935.1 ID=prot_H-elongata_contig82999.15935.1|Name=mRNA_H-elongata_contig82999.15935.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=189bp
KAERGRFQAIRSNFADVGKAVRGCQLLRARTQEPAAAAAAAANDDVSRES
GHDSAEVSPLVDGILVDLGVSSHQINERNRGFSFSSDGPLDMRMEGASSR
MEGDPAVDGADFGRRNAADVVNFADEVDVREMVWRYGEEKRSTKIARAIV
ESRPITTTGHLAEVVGRCAPPKDRTKTLARVFQALRIEV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023397SAM-dep_MeTrfase_MraW_recog
IPR002903RsmH