prot_H-elongata_contig82939.15932.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig82939.15932.1
Unique Name	prot_H-elongata_contig82939.15932.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	120

Homology

[Close]

BLAST of mRNA_H-elongata_contig82939.15932.1 vs. uniprot
Match: D7G669_ECTSI (Rhodanese domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G669_ECTSI)

HSP 1 Score: 187 bits (474), Expect = 1.510e-52
Identity = 91/120 (75.83%), Postives = 102/120 (85.00%), Query Frame = 0

Query:    1 RREPLSYFVVDCRPKEQVKAGRFPTAFHLDPSSMDNPEEMAEKIMLDFEPLRGRAHVCLVGSGDGHLRARGSWVQTMGGKDDGAGAIGSQRAARDEYSYVNTCALFFVKRGFPFVSVLEG 120
            +R+PL++F VDCRPK+QV AGRFPTA+HLDPS+M+NPEEMAEKIM  FEPLR RAHVCL+GSGDGHLRARG      G      G IGSQRAARD+YSYVNTCALFFVKRGFP+VSVLEG
Sbjct:  718 QRQPLAFFAVDCRPKQQVDAGRFPTAYHLDPSAMENPEEMAEKIMPVFEPLRKRAHVCLIGSGDGHLRARGL---AGGNGHQVGGGIGSQRAARDDYSYVNTCALFFVKRGFPYVSVLEG 834

[Close]

BLAST of mRNA_H-elongata_contig82939.15932.1 vs. uniprot
Match: K8YQB7_NANGC (Tbc1 domain family member 23-like protein (Fragment) n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YQB7_NANGC)

HSP 1 Score: 98.6 bits (244), Expect = 7.970e-22
Identity = 51/127 (40.16%), Postives = 77/127 (60.63%), Query Frame = 0

Query:    1 RREPLSYFVVDCRPKEQVKAGRFPTAFHLDPSSMDNPEEMAEKIMLDFEPLRGRAHVCLVGSGDGHLRARGSWVQTMGGKDDGAGAIGSQR-------AARDEYSYVNTCALFFVKRGFPFVSVLEG 120
            R   L Y  +DCRPKE V  GRFPTA+H+DPS +D+PEE+  +++   EP +G  H+ L+G+G     + G     +  +  G GA  +QR       A R +  +++T ALF +K+GFP+VS+L+G
Sbjct:  108 RLSSLRYLALDCRPKEHVAMGRFPTAYHVDPSRLDDPEEIT-RLLATLEPFKGSRHLLLMGTG----ASGGGLAPAVPKEGGGKGATPAQRFKEHMALAERQDMGHLHTAALFLLKQGFPYVSLLQG 229

[Close]

BLAST of mRNA_H-elongata_contig82939.15932.1 vs. uniprot
Match: W7U2B4_9STRA (Tbc1 domain family member 23 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U2B4_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 1.500e-21
Identity = 51/127 (40.16%), Postives = 77/127 (60.63%), Query Frame = 0

Query:    1 RREPLSYFVVDCRPKEQVKAGRFPTAFHLDPSSMDNPEEMAEKIMLDFEPLRGRAHVCLVGSGDGHLRARGSWVQTMGGKDDGAGAIGSQR-------AARDEYSYVNTCALFFVKRGFPFVSVLEG 120
            R   L Y  +DCRPKE V  GRFPTA+H+DPS +D+PEE+  +++   EP +G  H+ L+G+G     + G     +  +  G GA  +QR       A R +  +++T ALF +K+GFP+VS+L+G
Sbjct:  602 RLSSLRYLALDCRPKEHVAMGRFPTAYHVDPSRLDDPEEIT-RLLATLEPFKGSRHLLLMGTG----ASGGGLAPAVPKEGGGKGATPAQRFKEHMALAERQDMGHLHTAALFLLKQGFPYVSLLQG 723

[Close]

BLAST of mRNA_H-elongata_contig82939.15932.1 vs. uniprot
Match: A0A4D9DAX1_9STRA (Rhodanese domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAX1_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 5.270e-21
Identity = 50/127 (39.37%), Postives = 76/127 (59.84%), Query Frame = 0

Query:    1 RREPLSYFVVDCRPKEQVKAGRFPTAFHLDPSSMDNPEEMAEKIMLDFEPLRGRAHVCLVGSGDGHLRARGSWVQTMGGKDDGAGAIGSQR-------AARDEYSYVNTCALFFVKRGFPFVSVLEG 120
            R   L Y  +DCRPKE V  GRFPTA+H+DP  +D+PEE+  +++   EP +G  H+ L+G+G     + G     +  +  G GA  +QR       A R +  +++T ALF +K+GFP+VS+L+G
Sbjct: 1033 RLSSLRYLALDCRPKEHVAMGRFPTAYHVDPGRLDDPEEIT-RLLATLEPFKGSRHLLLMGTG----ASGGGLAPAVPKEGGGKGATPAQRFKEHMALAERQDMGHLHTAALFLLKQGFPYVSLLQG 1154

[Close]

BLAST of mRNA_H-elongata_contig82939.15932.1 vs. uniprot
Match: A0A067CAD9_SAPPC (TBC1 domain family member 23 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CAD9_SAPPC)

HSP 1 Score: 84.0 bits (206), Expect = 2.000e-16
Identity = 42/119 (35.29%), Postives = 66/119 (55.46%), Query Frame = 0

Query:    3 EPLSYFVVDCRPKEQVKAGRFPTAFHLDPSSMDNPEEMAEKIMLDFEPLRGRAHVCLVGSGDGHLRARGSWVQTMG-GKDDGAGAIGSQRAARDEYSYVNTCALFFVKRGFPFVSVLEG 120
            E + YF+VDCRP+E +  G+ PT+FH +  S+ NP    + +M   +P++   H+C++G G  H R   S V+ +   K D A  +    A       VN   +F  KRGFP+VS+++G
Sbjct:  675 EKIRYFIVDCRPQEYLAHGQIPTSFHFNSESLMNPSAF-DAVMATLQPMKSSVHICIMGHG--HSRYASSMVKDLNLSKSDVADMVAKDAAQ------VNDAVMFLTKRGFPYVSIIDG 784

[Close]

BLAST of mRNA_H-elongata_contig82939.15932.1 vs. uniprot
Match: B8C1V7_THAPS (Rhodanese domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1V7_THAPS)

HSP 1 Score: 82.8 bits (203), Expect = 5.170e-16
Identity = 43/117 (36.75%), Postives = 67/117 (57.26%), Query Frame = 0

Query:    5 LSYFVVDCRPKEQVKA-GRFPTAFHLDPSSMDNPEEMAEKIMLDFEPLRGRAHVCLVGSGDGHLRARGSWVQTMGGKDDGAGAIGSQRAARDEYSYVNTCALFFVKRGFPFVSVLEG 120
            L ++++DCRP+   K  GRFPTA ++ P  + +P+E+ +K++  FE LRG  H+C++G G     A      T             ++   ++ S  + CALFF+K+GFPFVSVL G
Sbjct: 1037 LKFYLIDCRPESIAKEQGRFPTAVNMSPQKLQDPDEV-QKLLDMFEALRGAVHICIMGEGFASFPALYDHPLTAE----------EEKLLDEDVSRTSNCALFFLKKGFPFVSVLRG 1142

[Close]

BLAST of mRNA_H-elongata_contig82939.15932.1 vs. uniprot
Match: A0A1V9ZSV3_9STRA (Rhodanese domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZSV3_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 9.470e-16
Identity = 40/119 (33.61%), Postives = 65/119 (54.62%), Query Frame = 0

Query:    3 EPLSYFVVDCRPKEQVKAGRFPTAFHLDPSSMDNPEEMAEKIMLDFEPLRGRAHVCLVGSGDGHLRARGSWVQTMG-GKDDGAGAIGSQRAARDEYSYVNTCALFFVKRGFPFVSVLEG 120
            E + YF+VDCRP+E +  G  PT+FH +  S+ +P    + +M   +P++   H+C++G G  H R   S V+ +   K D A  +    A       +N   +F  KRGFP+VS+++G
Sbjct:  692 EKIRYFIVDCRPRESIALGTIPTSFHFNSESVMDPAAF-DAVMATLQPMKNSVHICIMGHG--HARYAASMVKDLNFAKSDVADMVAKDAAQ------INDAVMFLTKRGFPYVSIVDG 801

[Close]

BLAST of mRNA_H-elongata_contig82939.15932.1 vs. uniprot
Match: A0A7S1ZR35_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZR35_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 2.380e-15
Identity = 42/117 (35.90%), Postives = 70/117 (59.83%), Query Frame = 0

Query:    5 LSYFVVDCRPKEQVKA-GRFPTAFHLDPSSMDNPEEMAEKIMLDFEPLRGRAHVCLVGSGDGHLRARGSWVQTMGGKDDGAGAIGSQRAARDEYSYVNTCALFFVKRGFPFVSVLEG 120
            + ++++D RP E  K  GRFPT+  L P +M +P+++ +++ + FE LRG  H+C++G G     A    +  +  KD+          A D+ +  + CALFF+K+GFPFVS+L+G
Sbjct:  312 IKFYLIDSRPDESAKEQGRFPTSISLSPEAMMDPDKVQQQLDM-FESLRGAVHICVMGEGFSKFPA----LYGLKLKDE------EMAHAEDDEARTSMCALFFIKKGFPFVSILDG 417

[Close]

BLAST of mRNA_H-elongata_contig82939.15932.1 vs. uniprot
Match: A0A1E7EUG7_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EUG7_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 2.390e-15
Identity = 47/120 (39.17%), Postives = 65/120 (54.17%), Query Frame = 0

Query:    2 REPLSYFVVDCRPKEQVKA-GRFPTAFHLDPSSMDNPEEMAEKIMLDFEPLRGRAHVCLVGSGDGHLRARGSWVQTMGGKDDGAGAIGSQRAARDEYSYVNTCALFFVKRGFPFVSVLEG 120
            R PL ++VVD RP+   +  GRFPT+  L P  +D+  +M E+ ++ FE LRG  H+C++G G   L        T G               R++    N CALFF+ RGFPFVS+LEG
Sbjct:  742 RMPLKFYVVDSRPEAAAQEQGRFPTSLSLSPEKLDDINKMKEEEIM-FESLRGSVHICIMGEGYASLPRLYGHKMTNG----------LAEFIREDDLRNNKCALFFLSRGFPFVSILEG 850

[Close]

BLAST of mRNA_H-elongata_contig82939.15932.1 vs. uniprot
Match: A0A7S2XJZ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XJZ9_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 4.380e-15
Identity = 42/117 (35.90%), Postives = 68/117 (58.12%), Query Frame = 0

Query:    5 LSYFVVDCRPKEQVK-AGRFPTAFHLDPSSMDNPEEMAEKIMLDFEPLRGRAHVCLVGSGDGHLRARGSWVQTMGGKDDGAGAIGSQRAARDEYSYVNTCALFFVKRGFPFVSVLEG 120
            L ++++D RP E  +  GRFPTA  L P ++ +P+ + E++ + FE LRG  H+C++G G         +   +  K++        +   ++ S  + CALFFVKRGFPFVS+L+G
Sbjct:  780 LKFYLIDSRPDEMARYEGRFPTAVSLSPEALLDPDRIQEQVEM-FEALRGAVHICVMGEGFSSFPTL--YNHRLTSKEE--------KLQEEDESRTSNCALFFVKRGFPFVSILDG 885

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig82939.15932.1 vs. uniprot

BLAST of mRNA_H-elongata_contig82939.15932.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G669_ECTSI	1.510e-52	75.83	Rhodanese domain-containing protein n=2 Tax=Ectoca...	[more]
K8YQB7_NANGC	7.970e-22	40.16	Tbc1 domain family member 23-like protein (Fragmen...	[more]
W7U2B4_9STRA	1.500e-21	40.16	Tbc1 domain family member 23 n=1 Tax=Nannochlorops...	[more]
A0A4D9DAX1_9STRA	5.270e-21	39.37	Rhodanese domain-containing protein n=1 Tax=Nannoc...	[more]
A0A067CAD9_SAPPC	2.000e-16	35.29	TBC1 domain family member 23 n=2 Tax=Saprolegnia T...	[more]
B8C1V7_THAPS	5.170e-16	36.75	Rhodanese domain-containing protein n=1 Tax=Thalas...	[more]
A0A1V9ZSV3_9STRA	9.470e-16	33.61	Rhodanese domain-containing protein n=1 Tax=Achlya...	[more]
A0A7S1ZR35_9STRA	2.380e-15	35.90	Hypothetical protein n=1 Tax=Ditylum brightwellii ...	[more]
A0A1E7EUG7_9STRA	2.390e-15	39.17	Uncharacterized protein n=1 Tax=Fragilariopsis cyl...	[more]
A0A7S2XJZ9_9STRA	4.380e-15	35.90	Hypothetical protein (Fragment) n=1 Tax=Attheya se...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR039755	TBC1 domain family member 23	PANTHER	PTHR13297	UNCHARACTERIZED	coord: 3..120
IPR001763	Rhodanese-like domain	PROSITE	PS50206	RHODANESE_3	coord: 3..102 score: 8.629
IPR036873	Rhodanese-like domain superfamily	SUPERFAMILY	52821	Rhodanese/Cell cycle control phosphatase	coord: 6..63

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig82939	contig	H-elongata_contig82939:1557..2753 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig82939.15932.1	mRNA_H-elongata_contig82939.15932.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig82939 1557..2753 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig82939.15932.1 ID=prot_H-elongata_contig82939.15932.1|Name=mRNA_H-elongata_contig82939.15932.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=120bp
RREPLSYFVVDCRPKEQVKAGRFPTAFHLDPSSMDNPEEMAEKIMLDFEP
LRGRAHVCLVGSGDGHLRARGSWVQTMGGKDDGAGAIGSQRAARDEYSYV
NTCALFFVKRGFPFVSVLEG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR039755	TBC1D23
IPR001763	Rhodanese-like_dom
IPR036873	Rhodanese-like_dom_sf