prot_H-elongata_contig82923.15930.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig82923.15930.1
Unique Nameprot_H-elongata_contig82923.15930.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length57
Homology
BLAST of mRNA_H-elongata_contig82923.15930.1 vs. uniprot
Match: D7FVH1_ECTSI (FERM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVH1_ECTSI)

HSP 1 Score: 119 bits (298), Expect = 4.450e-33
Identity = 55/57 (96.49%), Postives = 56/57 (98.25%), Query Frame = 0
Query:    1 MYGSHFFYSLKVQCVPDLLSTLPNNLLLSFNADGMHIFSVDKKELLQQYSYADVHSW 57
            MYGSHFFYSLKVQCVPDLLS LPNNLLL+FNADGMHIFSVDKKELLQQYSYADVHSW
Sbjct:   51 MYGSHFFYSLKVQCVPDLLSNLPNNLLLAFNADGMHIFSVDKKELLQQYSYADVHSW 107          
BLAST of mRNA_H-elongata_contig82923.15930.1 vs. uniprot
Match: A0A6H5JBI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBI4_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 5.800e-30
Identity = 55/57 (96.49%), Postives = 56/57 (98.25%), Query Frame = 0
Query:    1 MYGSHFFYSLKVQCVPDLLSTLPNNLLLSFNADGMHIFSVDKKELLQQYSYADVHSW 57
            MYGSHFFYSLKVQCVPDLLS LPNNLLL+FNADGMHIFSVDKKELLQQYSYADVHSW
Sbjct: 1558 MYGSHFFYSLKVQCVPDLLSNLPNNLLLAFNADGMHIFSVDKKELLQQYSYADVHSW 1614          
BLAST of mRNA_H-elongata_contig82923.15930.1 vs. uniprot
Match: A0A835Z3M9_9STRA (FERM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3M9_9STRA)

HSP 1 Score: 106 bits (265), Expect = 7.730e-28
Identity = 47/57 (82.46%), Postives = 53/57 (92.98%), Query Frame = 0
Query:    1 MYGSHFFYSLKVQCVPDLLSTLPNNLLLSFNADGMHIFSVDKKELLQQYSYADVHSW 57
            MYGSHFFY+ KVQCVPDL++ LP  LLL+FNADGMHIFSV++KELLQQYSYADVHSW
Sbjct:   71 MYGSHFFYATKVQCVPDLMANLPKQLLLAFNADGMHIFSVNRKELLQQYSYADVHSW 127          
BLAST of mRNA_H-elongata_contig82923.15930.1 vs. uniprot
Match: A0A835YPP0_9STRA (Myosin I, high molecular weight-Acanthamoeba sp n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPP0_9STRA)

HSP 1 Score: 100 bits (248), Expect = 3.310e-23
Identity = 42/57 (73.68%), Postives = 52/57 (91.23%), Query Frame = 0
Query:    1 MYGSHFFYSLKVQCVPDLLSTLPNNLLLSFNADGMHIFSVDKKELLQQYSYADVHSW 57
            MYGSHFFY+ KVQCVPDL+S LP  LLL+FNADGM IF++++K++LQQY+YADVHSW
Sbjct: 1637 MYGSHFFYATKVQCVPDLMSNLPKQLLLAFNADGMQIFNINRKDMLQQYTYADVHSW 1693          
BLAST of mRNA_H-elongata_contig82923.15930.1 vs. uniprot
Match: A0A482S091_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S091_9ARCH)

HSP 1 Score: 58.9 bits (141), Expect = 1.030e-8
Identity = 29/62 (46.77%), Postives = 41/62 (66.13%), Query Frame = 0
Query:    1 MYGSHFFYSLKVQC-----VPDLLSTLPNNLLLSFNADGMHIFSVDKKELLQQYSYADVHSW 57
            MYGSH+FY+ K++      +P  +  LP NLLL FNA+GMHIF  +K+ LL  + Y+D+  W
Sbjct:  471 MYGSHWFYAHKMEPQSLVGIPRAIQQLPYNLLLGFNAEGMHIFDFNKRTLLS-FPYSDICRW 531          
BLAST of mRNA_H-elongata_contig82923.15930.1 vs. uniprot
Match: A0A7R9YCQ4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCQ4_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 1.030e-7
Identity = 22/57 (38.60%), Postives = 38/57 (66.67%), Query Frame = 0
Query:    2 YGSHFFYSLKVQCVPDLLSTLPNNLLLSFNADGMHIFSVDK-KELLQQYSYADVHSW 57
            YG+H+FY  +V   P++++ +P +L++ FNADGMHI    + +  L  + YAD++ W
Sbjct:  167 YGAHWFYCHRVNDQPEIVAAMPRDLVIGFNADGMHILDAGEGRAALATFGYADIYRW 223          
BLAST of mRNA_H-elongata_contig82923.15930.1 vs. uniprot
Match: A0A7R9YD73_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YD73_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 1.270e-7
Identity = 22/57 (38.60%), Postives = 38/57 (66.67%), Query Frame = 0
Query:    2 YGSHFFYSLKVQCVPDLLSTLPNNLLLSFNADGMHIFSVDK-KELLQQYSYADVHSW 57
            YG+H+FY  +V   P++++ +P +L++ FNADGMHI    + +  L  + YAD++ W
Sbjct: 1103 YGAHWFYCHRVNDQPEIVAAMPRDLVIGFNADGMHILDAGEGRAALATFGYADIYRW 1159          
BLAST of mRNA_H-elongata_contig82923.15930.1 vs. uniprot
Match: A0A7S3HK87_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HK87_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 8.270e-7
Identity = 25/61 (40.98%), Postives = 41/61 (67.21%), Query Frame = 0
Query:    2 YGSHFFYSLKVQC-----VPDLLSTLPNNLLLSFNADGMHIFSVDKKELLQQYSYADVHSW 57
            YGSH+FY+ K++      +P  +  LP +L+L+FNA+GMHI++  +K LL  + Y+D+  W
Sbjct:  567 YGSHWFYAHKMEPTSISGIPQNIRQLPTDLILAFNAEGMHIYTFSRK-LLLSFPYSDICRW 626          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig82923.15930.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FVH1_ECTSI4.450e-3396.49FERM domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JBI4_9PHAE5.800e-3096.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z3M9_9STRA7.730e-2882.46FERM domain-containing protein n=1 Tax=Tribonema m... [more]
A0A835YPP0_9STRA3.310e-2373.68Myosin I, high molecular weight-Acanthamoeba sp n=... [more]
A0A482S091_9ARCH1.030e-846.77Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7R9YCQ4_9STRA1.030e-738.60Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7R9YD73_9STRA1.270e-738.60Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S3HK87_9STRA8.270e-740.98Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 3..57
e-value: 2.6E-6
score: 29.5
IPR000299FERM domainPROSITEPS50057FERM_3coord: 1..57
score: 10.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig82923contigH-elongata_contig82923:1042..1212 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig82923.15930.1mRNA_H-elongata_contig82923.15930.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig82923 1030..1212 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig82923.15930.1 ID=prot_H-elongata_contig82923.15930.1|Name=mRNA_H-elongata_contig82923.15930.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=57bp
MYGSHFFYSLKVQCVPDLLSTLPNNLLLSFNADGMHIFSVDKKELLQQYS
YADVHSW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011993PH-like_dom_sf
IPR000299FERM_domain