prot_H-elongata_contig82794.15919.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig82794.15919.1
Unique Nameprot_H-elongata_contig82794.15919.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length55
Homology
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BLAST of mRNA_H-elongata_contig82794.15919.1 vs. uniprot
Match: D8LFW0_ECTSI (SURP motif domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFW0_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 6.990e-12
Identity = 41/56 (73.21%), Postives = 45/56 (80.36%), Query Frame = 0 
Query:    1 QVERIVRLWESKGVYTTAECNGLLAAAAAVTAKHASAKALASKAARVL-ERAGGGG 55
            +VERIVRLW S GV+T AEC+ LLAA A VTAKHASAKA+A KAA  L ERAG GG
Sbjct:  246 KVERIVRLWGSNGVFTPAECDSLLAAGAGVTAKHASAKAMAKKAAHGLRERAGRGG 301
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BLAST of mRNA_H-elongata_contig82794.15919.1 vs. uniprot
Match: A0A6H5J830_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J830_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 9.770e-12
Identity = 41/56 (73.21%), Postives = 45/56 (80.36%), Query Frame = 0 
Query:    1 QVERIVRLWESKGVYTTAECNGLLAAAAAVTAKHASAKALASKAARVL-ERAGGGG 55
            +VERIVRLW S GV+T AEC+ LLAA A VTAKHASAKA+A KAA  L ERAG GG
Sbjct:  266 KVERIVRLWGSNGVFTPAECDSLLAAGAGVTAKHASAKAMAKKAANGLRERAGRGG 321
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig82794.15919.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LFW0_ECTSI6.990e-1273.21SURP motif domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5J830_9PHAE9.770e-1273.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig82794contigH-elongata_contig82794:2049..2213 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig82794.15919.1mRNA_H-elongata_contig82794.15919.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig82794 2049..2213 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig82794.15919.1 ID=prot_H-elongata_contig82794.15919.1|Name=mRNA_H-elongata_contig82794.15919.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=55bp
QVERIVRLWESKGVYTTAECNGLLAAAAAVTAKHASAKALASKAARVLER
AGGGG
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