prot_H-elongata_contig82541.15906.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig82541.15906.1
Unique Nameprot_H-elongata_contig82541.15906.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length86
Homology
BLAST of mRNA_H-elongata_contig82541.15906.1 vs. uniprot
Match: D8LG27_ECTSI (Voltage dependent anion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG27_ECTSI)

HSP 1 Score: 134 bits (337), Expect = 1.230e-36
Identity = 67/86 (77.91%), Postives = 78/86 (90.70%), Query Frame = 0
Query:    1 RVPPDILSDDYSLKRTLKMKHTTPEGLSVTSKSEHNKGMAAALEAKFFHAKSGVMIDKAKLNPDGSMGLEASMKGVAKDVRLLAKV 86
            +V  DILSDDY+LKRTLKMKHTTP G++VT+KSEH+KG+  ALEAKFFHAKSGV IDKAKLNPDGSMGLEAS + VAK+V+L+AKV
Sbjct:   59 KVARDILSDDYNLKRTLKMKHTTPHGVTVTAKSEHSKGVNGALEAKFFHAKSGVSIDKAKLNPDGSMGLEASRRDVAKNVKLVAKV 144          
BLAST of mRNA_H-elongata_contig82541.15906.1 vs. uniprot
Match: A0A6H5L9E4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9E4_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 6.490e-27
Identity = 52/68 (76.47%), Postives = 62/68 (91.18%), Query Frame = 0
Query:   19 MKHTTPEGLSVTSKSEHNKGMAAALEAKFFHAKSGVMIDKAKLNPDGSMGLEASMKGVAKDVRLLAKV 86
            MKHTTP G++VT+KSEH+KG+  ALEAKFFHAKSGV IDKAKLNPDGSMGLEAS + +AK+V+L+AKV
Sbjct:    1 MKHTTPHGVTVTAKSEHSKGVNGALEAKFFHAKSGVSIDKAKLNPDGSMGLEASRRDIAKNVKLVAKV 68          
BLAST of mRNA_H-elongata_contig82541.15906.1 vs. uniprot
Match: A0A835YRG3_9STRA (Voltage dependent anion channel n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRG3_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 8.390e-18
Identity = 40/84 (47.62%), Postives = 58/84 (69.05%), Query Frame = 0
Query:    5 DILSDDYSLKRTLKMKHTTPEGLSVTSKSEHN--KGMAAALEAKFFHAKSGVMIDKAKLNPDGSMGLEASMKGVAKDVRLLAKV 86
            D+L+DDYSLK TLK+KHTTP  ++ T+++EH    G+A  L+ K+ H  SG  +DK  L PDG   +E S+ GVA+ ++L AK+
Sbjct:   16 DLLTDDYSLKNTLKLKHTTPHAVAFTAENEHKGASGVAGKLQLKYAHKPSGFSLDKVVLGPDGGTSVECSLAGVAEGLKLTAKI 99          
BLAST of mRNA_H-elongata_contig82541.15906.1 vs. uniprot
Match: A0A835YZM2_9STRA (Voltage dependent anion channel n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZM2_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 4.960e-13
Identity = 38/88 (43.18%), Postives = 60/88 (68.18%), Query Frame = 0
Query:    1 RVPPDILSDDYSLKRTLKMKHTTPEGLSVTSKSEHNKGMAAA--LEAKFFHAKSGVMIDKAKLNPDGSMGLEASMKGVAKDVRLLAKV 86
            +V  D+L+DD+SLKRT+K+KHTTP  ++ T ++EH KG A A  ++ K+ H  SG  +DK  +  +G+  +E S+ G+A  ++L AKV
Sbjct:   12 KVVNDLLTDDFSLKRTVKVKHTTPHNVNFTIENEH-KGSAVAGKVQLKYAHKPSGFALDKVTIAQNGAKTVECSLAGLAPGLKLTAKV 98          
BLAST of mRNA_H-elongata_contig82541.15906.1 vs. uniprot
Match: W7U0F0_9STRA (Voltage-dependent anion-selective channel n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0F0_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 2.770e-9
Identity = 29/67 (43.28%), Postives = 44/67 (65.67%), Query Frame = 0
Query:    6 ILSDDYSLKRTLKMKHTTPEGLSVTSKSEHNK-----GMAAALEAKFFHAKSGVMIDKAKLNPDGSM 67
            IL+DDYSLKRTLK+KH TP+G++VT+++E         + A +  K+ HA +G  +DK +L   G +
Sbjct:   19 ILNDDYSLKRTLKVKHVTPDGVAVTTENELTGKDGKFDLKAKISGKYKHAATGFSVDKLQLKETGGL 85          
BLAST of mRNA_H-elongata_contig82541.15906.1 vs. uniprot
Match: W7U446_9STRA (Voltage-dependent anion-selective channel protein 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U446_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 4.610e-7
Identity = 31/70 (44.29%), Postives = 48/70 (68.57%), Query Frame = 0
Query:    5 DILSDDYSLKRTLKMKHTTPEGLSVTSKSE-HNKGMAAALEAKFFHAKSGVMIDKAKLNPDGSMGLEASM 73
            D+L+DD++ KR LK+K  TP+G++ TS+ E  +KG+ A L AK+ H  SG+ +DK +   DG +  EAS+
Sbjct:   12 DLLNDDFTYKRKLKIKLPTPDGVTWTSEGELSSKGVMAKLAAKYKHP-SGISLDKLEFKSDGRVLGEASL 80          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig82541.15906.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LG27_ECTSI1.230e-3677.91Voltage dependent anion channel n=1 Tax=Ectocarpus... [more]
A0A6H5L9E4_9PHAE6.490e-2776.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YRG3_9STRA8.390e-1847.62Voltage dependent anion channel n=1 Tax=Tribonema ... [more]
A0A835YZM2_9STRA4.960e-1343.18Voltage dependent anion channel n=1 Tax=Tribonema ... [more]
W7U0F0_9STRA2.770e-943.28Voltage-dependent anion-selective channel n=2 Tax=... [more]
W7U446_9STRA4.610e-744.29Voltage-dependent anion-selective channel protein ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023614Porin domain superfamilyGENE3D2.40.160.10coord: 2..86
e-value: 1.8E-7
score: 32.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig82541contigH-elongata_contig82541:1231..2773 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig82541.15906.1mRNA_H-elongata_contig82541.15906.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig82541 1231..2773 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig82541.15906.1 ID=prot_H-elongata_contig82541.15906.1|Name=mRNA_H-elongata_contig82541.15906.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=86bp
RVPPDILSDDYSLKRTLKMKHTTPEGLSVTSKSEHNKGMAAALEAKFFHA
KSGVMIDKAKLNPDGSMGLEASMKGVAKDVRLLAKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023614Porin_dom_sf