prot_H-elongata_contig82428.15898.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig82428.15898.1
Unique Nameprot_H-elongata_contig82428.15898.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length74
Homology
BLAST of mRNA_H-elongata_contig82428.15898.1 vs. uniprot
Match: D7FW38_ECTSI (Aa_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW38_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 1.210e-20
Identity = 50/69 (72.46%), Postives = 58/69 (84.06%), Query Frame = 0
Query:    6 GGGVLSLPFALRRSGLVIGALLLVLTALAADFSVFTLVSCSRRSGASTYETVAHTAFGRLGGLITLGLV 74
            GGGVLSLPFALRRSG+V GA+LL+LTA A DF+VFTLVSCSRRSG S+YE+VA  AFGR   L+ + LV
Sbjct:   35 GGGVLSLPFALRRSGVVFGAILLLLTAFATDFTVFTLVSCSRRSGGSSYESVADVAFGRRAKLLCMALV 103          
BLAST of mRNA_H-elongata_contig82428.15898.1 vs. uniprot
Match: A0A835ZAV6_9STRA (Transmembrane amino acid transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAV6_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 5.240e-16
Identity = 43/58 (74.14%), Postives = 50/58 (86.21%), Query Frame = 0
Query:    6 GGGVLSLPFALRRSGLVIGALLLVLTALAADFSVFTLVSCSRRSGASTYETVAHTAFG 63
            GGGVLSLPFAL+R+GL+ G  LLVLTALA+DFSV+ LVSCSRRSGA ++E VA  AFG
Sbjct:   38 GGGVLSLPFALQRAGLIPGLALLVLTALASDFSVYILVSCSRRSGAQSFEEVAEKAFG 95          
BLAST of mRNA_H-elongata_contig82428.15898.1 vs. uniprot
Match: A0A024U9R4_9STRA (Aa_trans domain-containing protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A024U9R4_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 3.670e-13
Identity = 36/73 (49.32%), Postives = 53/73 (72.60%), Query Frame = 0
Query:    1 MTVFAGGGVLSLPFALRRSGLVIGALLLVLTALAADFSVFTLVSCSRRSGASTYETVAHTAFGRLGGLITLGL 73
            +T   GGGVL LPF + +SG+V+G +L++  A+A+ F+ + LVSCSRRSGA +YE +A  AFGR   ++T+ L
Sbjct:   59 VTTLIGGGVLLLPFTIAKSGIVVGCVLMLCCAMASSFTSYILVSCSRRSGAQSYEEIARNAFGRKMQIVTMVL 131          
BLAST of mRNA_H-elongata_contig82428.15898.1 vs. uniprot
Match: A0A485KWV7_9STRA (Aste57867_12930 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KWV7_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 6.850e-13
Identity = 36/74 (48.65%), Postives = 53/74 (71.62%), Query Frame = 0
Query:    1 MTVFAGGGVLSLPFALRRSGLVIGALLLVLTALAADFSVFTLVSCSRRSGASTYETVAHTAFGRLGGLITLGLV 74
            +T   GGGVL LPF + +SG+V+G  L++  A+A+ F+++ LVSCSRRSGA +YE +A  AFG+   L T+ L+
Sbjct:   58 VTTLIGGGVLLLPFTIAKSGIVVGCFLMLCCAMASSFTLYILVSCSRRSGAQSYEEIAKNAFGKKMQLFTMVLL 131          
BLAST of mRNA_H-elongata_contig82428.15898.1 vs. uniprot
Match: A0A6A5ANP3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ANP3_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.410e-12
Identity = 35/73 (47.95%), Postives = 52/73 (71.23%), Query Frame = 0
Query:    1 MTVFAGGGVLSLPFALRRSGLVIGALLLVLTALAADFSVFTLVSCSRRSGASTYETVAHTAFGRLGGLITLGL 73
            +T   GGGVL LPF + +SG+V+G ++++  A A+ F+ + LVSCSRRSGA +YE +A  AFGR   ++T+ L
Sbjct:   57 VTTLIGGGVLLLPFTIAKSGIVVGCIIMLCCATASSFTSYILVSCSRRSGAQSYEEIARNAFGRKMQVVTMVL 129          
BLAST of mRNA_H-elongata_contig82428.15898.1 vs. uniprot
Match: K3WGF0_GLOUD (Aa_trans domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGF0_GLOUD)

HSP 1 Score: 70.5 bits (171), Expect = 1.770e-12
Identity = 36/73 (49.32%), Postives = 52/73 (71.23%), Query Frame = 0
Query:    2 TVFAGGGVLSLPFALRRSGLVIGALLLVLTALAADFSVFTLVSCSRRSGASTYETVAHTAFGRLGGLITLGLV 74
            +   GGGVLSLP+A  + GLV+  + +VL+A A++FS++ +VSCSRR GA+TYE +   A G   GLIT+ L+
Sbjct:   82 STIVGGGVLSLPYAFDKCGLVLTVVFMVLSAAASNFSLYVIVSCSRRGGATTYEEIVRKALGPKAGLITVTLL 154          
BLAST of mRNA_H-elongata_contig82428.15898.1 vs. uniprot
Match: A0A5D6XH06_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XH06_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 2.490e-12
Identity = 33/69 (47.83%), Postives = 52/69 (75.36%), Query Frame = 0
Query:    6 GGGVLSLPFALRRSGLVIGALLLVLTALAADFSVFTLVSCSRRSGASTYETVAHTAFGRLGGLITLGLV 74
            GGG+LSLP+A  + GLV+  + +V++A+A++FS++ +VSCSRR GA+TYE +   A G   GL+T+ L+
Sbjct:   91 GGGILSLPYAFEKCGLVLAFVFMVVSAMASNFSLYVIVSCSRRGGATTYEEIVRKALGPKAGLVTVTLL 159          
BLAST of mRNA_H-elongata_contig82428.15898.1 vs. uniprot
Match: A0A1W0A103_9STRA (Sodium-coupled neutral amino acid transporter n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A103_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 4.440e-12
Identity = 32/64 (50.00%), Postives = 48/64 (75.00%), Query Frame = 0
Query:    1 MTVFAGGGVLSLPFALRRSGLVIGALLLVLTALAADFSVFTLVSCSRRSGASTYETVAHTAFGR 64
            +T   GGGVL LP+ + RSG+V+G  +++L A+ + F+++ LVSCSRRSGA +YE +A  AFG+
Sbjct:   47 VTTLIGGGVLLLPYTIARSGIVLGCFMMLLCAMGSSFTLYILVSCSRRSGAQSYEEIAKNAFGK 110          
BLAST of mRNA_H-elongata_contig82428.15898.1 vs. uniprot
Match: K3WGD4_GLOUD (Aa_trans domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGD4_GLOUD)

HSP 1 Score: 68.9 bits (167), Expect = 6.160e-12
Identity = 33/74 (44.59%), Postives = 53/74 (71.62%), Query Frame = 0
Query:    1 MTVFAGGGVLSLPFALRRSGLVIGALLLVLTALAADFSVFTLVSCSRRSGASTYETVAHTAFGRLGGLITLGLV 74
            ++   GGG+LSLP+A  + G+V+  + ++++A A++FS++ +VSCSRR GA+TYE V   A G   GLIT+ L+
Sbjct:  100 VSTIIGGGILSLPYAFDKCGIVLAVVFMIVSAAASNFSLYVIVSCSRRGGATTYEEVVRKALGPKAGLITVTLL 173          
BLAST of mRNA_H-elongata_contig82428.15898.1 vs. uniprot
Match: A0A2D4CAQ0_PYTIN (Aa_trans domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CAQ0_PYTIN)

HSP 1 Score: 68.6 bits (166), Expect = 8.370e-12
Identity = 34/74 (45.95%), Postives = 52/74 (70.27%), Query Frame = 0
Query:    1 MTVFAGGGVLSLPFALRRSGLVIGALLLVLTALAADFSVFTLVSCSRRSGASTYETVAHTAFGRLGGLITLGLV 74
            ++   GGGVLSLP+A  + GLV+  +L+V+++ A+ FS++ +VSCSRR G +TYE V   A G   GL+T+ L+
Sbjct:   71 VSTIIGGGVLSLPYAFDKCGLVLAVVLMVISSAASTFSLYIIVSCSRRGGVTTYEEVVRKALGVRAGLVTVSLL 144          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig82428.15898.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW38_ECTSI1.210e-2072.46Aa_trans domain-containing protein n=2 Tax=Ectocar... [more]
A0A835ZAV6_9STRA5.240e-1674.14Transmembrane amino acid transporter protein-domai... [more]
A0A024U9R4_9STRA3.670e-1349.32Aa_trans domain-containing protein n=6 Tax=Aphanom... [more]
A0A485KWV7_9STRA6.850e-1348.65Aste57867_12930 protein n=1 Tax=Aphanomyces stella... [more]
A0A6A5ANP3_9STRA1.410e-1247.95Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
K3WGF0_GLOUD1.770e-1249.32Aa_trans domain-containing protein n=1 Tax=Globisp... [more]
A0A5D6XH06_9STRA2.490e-1247.83Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A1W0A103_9STRA4.440e-1250.00Sodium-coupled neutral amino acid transporter n=1 ... [more]
K3WGD4_GLOUD6.160e-1244.59Aa_trans domain-containing protein n=1 Tax=Globisp... [more]
A0A2D4CAQ0_PYTIN8.370e-1245.95Aa_trans domain-containing protein n=1 Tax=Pythium... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013057Amino acid transporter, transmembrane domainPFAMPF01490Aa_transcoord: 3..70
e-value: 1.9E-11
score: 43.4
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..43
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 44..74
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig82428contigH-elongata_contig82428:256..477 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig82428.15898.1mRNA_H-elongata_contig82428.15898.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig82428 256..486 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig82428.15898.1 ID=prot_H-elongata_contig82428.15898.1|Name=mRNA_H-elongata_contig82428.15898.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=74bp
MTVFAGGGVLSLPFALRRSGLVIGALLLVLTALAADFSVFTLVSCSRRSG
ASTYETVAHTAFGRLGGLITLGLV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013057AA_transpt_TM