prot_H-elongata_contig82427.15897.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig82427.15897.1
Unique Nameprot_H-elongata_contig82427.15897.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length70
Homology
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BLAST of mRNA_H-elongata_contig82427.15897.1 vs. uniprot
Match: A0A6H5KDP6_9PHAE (Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KDP6_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 8.940e-24
Identity = 48/67 (71.64%), Postives = 57/67 (85.07%), Query Frame = 0 
Query:    3 SSCQVAFSIANASFYSDCECGVVPSVSEGECSVSGYTFQKERDGSTPFAPSFPASSPWVTSVGATQV 69
            S CQ+AF IA  SFYSDC C  VP ++EG C++SGYT+Q E+DG+TPFAPSFPASSPWVTS+GATQV
Sbjct:  574 SECQMAFEIARPSFYSDCACADVPPMTEGSCTLSGYTYQPEKDGATPFAPSFPASSPWVTSIGATQV 640
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BLAST of mRNA_H-elongata_contig82427.15897.1 vs. uniprot
Match: A0A835Z7S3_9STRA (Subtilisin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7S3_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 5.740e-10
Identity = 35/74 (47.30%), Postives = 44/74 (59.46%), Query Frame = 0 
Query:    5 CQVAFSIANASFYSDCECGVVPSVSEGECSVSGYT---------FQKERDGSTPFAPSFPASSPWVTSVGATQV 69
            C +A      + YS+C C  +P VS+G+CS  GY          F K    S PFAP+FPASSPWVT+VGATQ+
Sbjct:  485 CHIAIDPVREALYSECTCDQIPVVSQGKCSFRGYVVGDVTAKTAFGKPTPAS-PFAPNFPASSPWVTAVGATQI 557
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig82427.15897.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KDP6_9PHAE8.940e-2471.64Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A... [more]
A0A835Z7S3_9STRA5.740e-1047.30Subtilisin n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036852Peptidase S8/S53 domain superfamilyGENE3D3.40.50.200coord: 5..70
e-value: 4.0E-8
score: 35.0
IPR036852Peptidase S8/S53 domain superfamilySUPERFAMILY52743Subtilisin-likecoord: 44..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig82427contigH-elongata_contig82427:1961..2170 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig82427.15897.1mRNA_H-elongata_contig82427.15897.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig82427 1961..2170 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig82427.15897.1 ID=prot_H-elongata_contig82427.15897.1|Name=mRNA_H-elongata_contig82427.15897.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=70bp
SSSSCQVAFSIANASFYSDCECGVVPSVSEGECSVSGYTFQKERDGSTPF
APSFPASSPWVTSVGATQVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036852Peptidase_S8/S53_dom_sf