prot_H-elongata_contig8239.15894.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8239.15894.1
Unique Nameprot_H-elongata_contig8239.15894.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length708
Homology
BLAST of mRNA_H-elongata_contig8239.15894.1 vs. uniprot
Match: A0A6H5JWF7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWF7_9PHAE)

HSP 1 Score: 438 bits (1126), Expect = 1.370e-140
Identity = 335/786 (42.62%), Postives = 406/786 (51.65%), Query Frame = 0
Query:    2 DQGNGKQGISRQGPLRSITTPPFAGRATLRNSGPLAPALRDSSSNSSVGSGATTDTQTAPYQHGVPPSLSQPLTYQQQPPI----QAVFPYSSPNLAAVADMSSIGQQPTSRSEAPAFTLTPAPTSSDPLSDLLL--SGVHTGRNAPNDRLSNHDSFHRASNSEFNSRSFPVAQTQAPPFAPEPTPPAWIASVSGDGGTVVGRDHDGSRAAAPPTPSSSQPMPALPXXPTNYAG----------------SSFATSAKHYHPQQLPRAIPPPVVTRP------------------------FPPTTPPAPVKAAFRTPPASPQEKSLDQLVSEFLTVSAPPAPEPADQNLHLSDPNGWVAALGQLARRRAWAYIVDVAGKMLETHRRGGALGLTAEQVMTLRLRRASGMLRIGKIEEAAEAASEAARGNGHPPLSTVSIAARFVAASAKSMLSGVAEEEAIDELTALKLELKSVMDSG-----VVPPFSNETIEGATVSM----------------VAAAVWRQRVITSLTNAFVRRGSWRQALGLLETMGEE---------CASSTYAGKRNARDVTGKEQTADGALPDGAAEIAGNALVAAARVDVLTRIGRVFLQFGALEDAEVYFRRAENTAVEPAHDPRILVNNGLLLFSKNDFVAAQESFQRAAAAAA----QAEPSGQRDDDWLWAYLDEGAGLLDCALNNLSLALVYSCDVIGAVQTLEGLIRKDPCLYMLDVVVFNLCTLYDLSFDPVASAKKKRTLQAVAQRFRLEDIDATSFRLS 707
            ++ + KQGISR+GPLRSI +PPFAG     NSGPLA    D+S+  S   GA     TA        + S PL Y  Q  +    Q   P  SP    ++    +   PT+   + + T     +S++PLS LLL  +G+   R+AP               S          +     F     PP           T      D  +A          PMPALPXX                      S  A S        LP  IPPP +                           +PP  P              PQEK+LD LV EFL+  APP PEP ++ L L DP+GWVAALGQLA RRAW  +V++AG ML  HR GGA GLTA+Q M LRLRRA GML++G+  EAAEAA                               G AEEEA+DELT LK EL+ V+ +G     + P  S + +E  T                     A  WR+RV+ +L N FV RG+WR ALGLLE +GE+         C+SS++       DVTG            A E    A V   RV++L+RIGRVFLQFG+LEDAEVYFRRAE  A     +PRILVN GLL FS+N+FVAAQE+F+ AA  AA    + EP    DD+WLWA LD+GAGLLD ALNNLSLA+VYSCDV+  V+TLEGLIRKDP LYMLDVV+FNLCTLYDLSFD VASAKKKRTLQAVAQRFRLEDID +SFR+S
Sbjct:    3 EEDDSKQGISREGPLRSIASPPFAGPVAHVNSGPLAHNHADNSAALSSHPGAPPPAATAAS------AASHPLDYDSQVHLPQQQQQRLPLQSPPRGPLSGGIPLPVAPTAAPISSSST-----SSNNPLSHLLLRPNGMRMERDAP-------------PASXXXXXXXXATEPATAKFDFSGNPPXXXXXXXXXXXTAGPEVSDSPKAP---------PMPALPXXXXXXXXXXXXXXXXXXXXXXXRSQPAPSPATLSGVALP-CIPPPQLPXXXXXXXXXXXXXXXXXXXXXXXXXXYPPRQP--------------PQEKTLDALVLEFLSTEAPPPPEPVNETLALGDPDGWVAALGQLAWRRAWRKLVEIAGTMLVAHRGGGAPGLTADQAMDLRLRRAMGMLKLGRAAEAAEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEAEEEALDELTVLKFELEGVIAAGDGPSALAPSPSEDGMEATTXXXXXXXXXXXXXXXXXXXAEATTWRRRVMLNLVNMFVARGNWRMALGLLEDLGEDQCGERSTPACSSSSH------EDVTGA-----------AREEGARAPVDDLRVELLSRIGRVFLQFGSLEDAEVYFRRAEAAAAAVGSNPRILVNRGLLNFSRNEFVAAQENFRNAATEAAMLAAKEEPPDDSDDNWLWATLDQGAGLLDTALNNLSLAMVYSCDVLRGVRTLEGLIRKDPRLYMLDVVIFNLCTLYDLSFDAVASAKKKRTLQAVAQRFRLEDIDPSSFRMS 723          
BLAST of mRNA_H-elongata_contig8239.15894.1 vs. uniprot
Match: D8LLE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLE2_ECTSI)

HSP 1 Score: 342 bits (876), Expect = 1.370e-108
Identity = 211/420 (50.24%), Postives = 244/420 (58.10%), Query Frame = 0
Query:  292 VSAPPAPEPADQNLHLSDPNGWVAALGQLARRRAWAYIVDVAGKMLETHRRGGALGLTAEQVMTLRLRRASGMLRIGKIEEAAEAASEAARGNGHPPLSTVSIAARFVAASAKSMLSGVAEEEAIDELTALKLELKSVMDSGVVPPFSNETIEGATVSMVAAAVWRQRVITSLTNAFVRRGSWRQALGLLETMGEECASSTYAGKRNARDVTGKEQTADGALPDGAAEIAGNALVAAARVDVLTRIGRVFLQFGALEDAEVYFRRAENTAVEPAHDPRILVNNGLLLFSKNDFVAAQESFQRAAAAAA----QAEPSGQRDDDWLWAYLDEGAGLLDCALNNLSLALVYSCDVIGAVQTLEGLIRKDPCLYMLDVVVFNLCTLYDLSFDPVASAKKKRTLQAVAQRFRLEDIDATSFRLS 707
            + APP PEP ++ L L DP+GWVAALGQLA RRAW  +V++AG ML  HR GGA GLTA+Q M LRLRRA GML++G+  EAAEAA                               G AEEEA+DELTALK+                           AAA   +    S+ N                                                               RV++L+RIGRVFLQFG+LEDAEVYFRRAE  A     +PRILVN GLL FS+N+FVAAQE+F+ AA  AA    + EP    DD+WLWA LD+GAGLLD ALNNLSLA+VYSCDV+  V+TLEGLIRKDP LYMLDVV+FNLCTLYDLSFD VASAKKKRTLQAVAQRFRLEDIDA+SFR+S
Sbjct:    1 MEAPPPPEPVNETLALGDPDGWVAALGQLAWRRAWRKLVEIAGTMLVAHRGGGAPGLTADQAMDLRLRRAMGMLKLGRAAEAAEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCEGEAEEEALDELTALKV--------------------------TAAAAGEEGARASVDNV--------------------------------------------------------------RVELLSRIGRVFLQFGSLEDAEVYFRRAEAAAAVAGSNPRILVNRGLLDFSRNEFVAAQENFRNAATEAAMLAAKEEPPDGSDDNWLWATLDQGAGLLDAALNNLSLAMVYSCDVLRGVRTLEGLIRKDPRLYMLDVVIFNLCTLYDLSFDAVASAKKKRTLQAVAQRFRLEDIDASSFRMS 332          
BLAST of mRNA_H-elongata_contig8239.15894.1 vs. uniprot
Match: A0A6H5KFR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFR3_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 3.370e-39
Identity = 81/110 (73.64%), Postives = 91/110 (82.73%), Query Frame = 0
Query:  598 AAQAEPSGQRDDDWLWAYLDEGAGLLDCALNNLSLALVYSCDVIGAVQTLEGLIRKDPCLYMLDVVVFNLCTLYDLSFDPVASAKKKRTLQAVAQRFRLEDIDATSFRLS 707
            AA+ EP    DD WL A LD+GAGLLD AL NLSLA+  SCDV+  V+TL+GLIRK+P LYMLDVV+FNLCTLYDLSFD VASAKK RTLQAV QRFRLEDID +SFR+S
Sbjct:    3 AAEEEPPDGSDDIWLRATLDQGAGLLDSALTNLSLAMC-SCDVLRGVRTLKGLIRKNPRLYMLDVVIFNLCTLYDLSFDAVASAKK-RTLQAVTQRFRLEDIDTSSFRMS 110          
BLAST of mRNA_H-elongata_contig8239.15894.1 vs. uniprot
Match: A0A836CFY7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFY7_9STRA)

HSP 1 Score: 133 bits (335), Expect = 1.310e-29
Identity = 124/424 (29.25%), Postives = 177/424 (41.75%), Query Frame = 0
Query:  314 VAALGQLARRRAWAYIVDVAGKMLETHRRGGALGLTAEQVMTLRLRRASGMLRIGKIEEAAEAASEAARGNGHPPLSTVSIAARFVAASAKSMLSGVAEEEAIDELTALKLELKSVMDSGVVPPFSNETIEGAT-----------VSMVAAAVWRQRVITSLTNAFVRRGSWRQALGLLETMGEECASSTYAGKRNARDVTGKEQTADGALPDGAAEIAGNALVAAARVDVLTRIGRVFLQFGALEDAEVYFRRAEN-----------TAVEPAHDPRILVNNGLLLFSKNDFVAAQESFQRAAAAAAQAEPSGQ---------RDDDWLWAYLDEGAGLLDCALNNLSLALVYSCDVIGAVQTLEGLIRKDPCLYMLDVVVFNLCTLYDLSFDPVASAKKKRTLQAVAQRFRLEDIDATSFRL 706
            V+ L   A  RAW  +   A    E     GAL  +      +R+ RA+ +LR+  +++A        R +     +    AA  +A         ++ ++AI  L  LK  L + + +    P    T  G T           ++   A  WR+RV T+L +AF   G WR AL  L+   ++      +G                                AAR +V +RIGRVFLQ G +  A  ++ RAE             A    H  + L+N GLL F+++DF  A E  +RAAA A  A                             LL  A +N +LA +Y+CDV  A+   EG  R+DP   + D   FNLCTLYDL   P  SA +K  L A+AQRF L+D+D  SFR+
Sbjct:   78 VSCLLVFAEMRAWRSVAAAA----EALPASGAL--SPSDAADVRMCRATALLRMRHVDDAQAELQRVQRASA-AAATPAPFAAELLALQIGLFKGTLSSDDAIASLGTLKRALDARIAAAAASP---ATESGYTXXXXXXXXXXXLTAQEAVRWRRRVRTTLASAFQVMGRWRAALAELQANDDDLRGVLASGXXXXXXXXXXXXX-----------------XLAARGEVNSRIGRVFLQIGDVHSATTFYNRAERMWAAAGSSGAGAADAALHRAQALINAGLLAFARSDFRGAAERHERAAAEARTARTLAAGXXXXXXXXXXXXXXXVEXXXXXALLAAAASNAALAHLYACDVARALAAAEGAAREDPAAALRDTTAFNLCTLYDLGGGPAGSATRKAALAALAQRFSLDDVDVGSFRM 474          
BLAST of mRNA_H-elongata_contig8239.15894.1 vs. uniprot
Match: A0A7S2K5V8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K5V8_9STRA)

HSP 1 Score: 108 bits (271), Expect = 5.570e-23
Identity = 76/241 (31.54%), Postives = 128/241 (53.11%), Query Frame = 0
Query:  491 STYAGKRNARDVTGKEQTADGALPDGAAEIAGNALVAAARVDVLTRIGRVFLQFGALEDAEVYFRRAEN------TAVEPAHDP------------------RILVNNGLLLFSKNDFVAAQESFQRAAAAAAQAEPSGQRDDDW--LWAYLDEGAGLLDCALNNLSLALVYSCDVIGAVQTLEGLIRKDPCLYMLDVVVFNLCTLYDLSFDPVASAKKKRTLQAVAQRFRLEDIDATSFR 705
            S  AG + A +  G ++  +GA+ D A     +AL+AA+R+++L+R GR+ +Q GAL +A   F+ A++      +A+  A+                    +++VN G+LLF+  ++  A + F RA   A + E   Q       L  +L     L+  ALNN++L  +Y+C +  A+  +E L+R++P  Y+   + FNLCT+Y+L  D     ++KR LQ +A+RF L D+   SFR
Sbjct:    9 SALAGAKGALETFGADE--NGAVADVANGHFCSALLAASRIEILSRQGRMLMQTGALTEASTVFQYAQDEIPPILSALNAANKSSVIRNILSGVTIIHQAPKQLIVNEGILLFADGEYALAMDKF-RAVMEAQRQESKLQTHGTTGHLENWLTVNDSLIPPALNNMALCALYTCQLEKAISLMESLVRENPSRYLTQELAFNLCTMYELGSD--VGGRRKRVLQLIAKRFSLHDVPQASFR 244          
BLAST of mRNA_H-elongata_contig8239.15894.1 vs. uniprot
Match: A0A024G727_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G727_9STRA)

HSP 1 Score: 113 bits (283), Expect = 2.490e-22
Identity = 71/190 (37.37%), Postives = 109/190 (57.37%), Query Frame = 0
Query:  530 RVDVLTRIGRVFLQFGALEDAEVYFR-------RAENTAVEPAHDPRILVNNGLLLFSKNDFVAAQESFQRAAAAAAQAEPSGQRDDDWLWAYLD------EGAGLLDCALNNLSLALVYSCDVIGAVQTLEGLIRKDPCLYMLDVVVFNLCTLYDLSFDPVASAKKKRTLQAVAQRFRLEDIDATSFRL 706
            ++ VL+RIGR+++Q G +E AE+ F+       +  +   +P H P++L+N GLLL S+++   A  +F R+      AE   Q +D W    L       E   L+  A+NN ++  +YSCDV GAV  LE +IR  P  ++ +VVVFNL +LYDL +D   S  +K  L+ +A  + LE IDA +FR+
Sbjct:  562 QIIVLSRIGRIYMQLGDIESAEILFKHVSVLSEKLSSDEKQPGH-PQVLMNKGLLLLSRDNIQEAIHTF-RSILHLGLAEGKAQ-NDKWSNTILPDEDLMLEQGELICAAVNNYAICALYSCDVHGAVTMLERMIRLCPLRFLNEVVVFNLSSLYDLIYDNANSTNRKEMLKRIADLYNLEHIDAAAFRI 748          
BLAST of mRNA_H-elongata_contig8239.15894.1 vs. uniprot
Match: F0WJF3_9STRA (Uncharacterized protein AlNc14C121G6682 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WJF3_9STRA)

HSP 1 Score: 111 bits (278), Expect = 1.050e-21
Identity = 69/186 (37.10%), Postives = 108/186 (58.06%), Query Frame = 0
Query:  530 RVDVLTRIGRVFLQFGALEDAEVYFRRAENTAVE-PAHD-----PRILVNNGLLLFSKNDFVAAQESFQ---RAAAAAAQAEPSGQRDDDWLWAYLDEGAGLLDCALNNLSLALVYSCDVIGAVQTLEGLIRKDPCLYMLDVVVFNLCTLYDLSFDPVASAKKKRTLQAVAQRFRLEDIDATSFRL 706
            ++ VL+RIGR+++Q G +E AE+ F+   + + + P+H       ++L+N GLLL S+++   A E F        A  Q + S   ++  L   L E   L+  A+NN ++  +YSCDV GAV  LE +IR  P  ++ +VVVFNL +LYDL +D   S  +K  L+ +A  + LE IDA +FR+
Sbjct:  582 QIAVLSRIGRIYMQLGDIESAEMVFQHVRHLSEKLPSHQNQTLHAQVLMNKGLLLLSRDNVQEAIEIFSSILHLELANGQTKNSQWSNEIVLDDLLLEQEDLICAAVNNYAICALYSCDVHGAVAMLEKMIRLSPVRFLNEVVVFNLSSLYDLIYDNANSTNRKEMLKRIADAYDLEHIDAAAFRI 767          
BLAST of mRNA_H-elongata_contig8239.15894.1 vs. uniprot
Match: L8H1C1_ACACA (Tetratricopeptide repeat domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H1C1_ACACA)

HSP 1 Score: 90.1 bits (222), Expect = 4.630e-15
Identity = 58/176 (32.95%), Postives = 92/176 (52.27%), Query Frame = 0
Query:  531 VDVLTRIGRVFLQFGALEDAEVYFRRAENTAVEPAHDPRILVNNGLLLFSKNDFVAAQESFQRAAAAAAQAEPSGQRDDDWLWAYLDEGAGLLDCALNNLSLALVYSCDVIGAVQTLEGLIRKDPCLYMLDVVVFNLCTLYDLSFDPVASAKKKRTLQAVAQRFRLEDIDATSFRL 706
            V +L+ +GR+ LQ+G L  AE YFR  E    EP +   +++N G+    ++ +  A  +F+R      + EP    D+ W              A NN ++  +Y  D+  ++ +LE LI  +P   +LDVVVFNLCTLYDL  D  +S  KK+ L A+  +F  +D D +  ++
Sbjct:  450 VVLLSAVGRLLLQWGNLTGAERYFRDVEQLVTEPTNSVVVMMNRGMEYIGRDRYSDAARAFER----VLELEP----DNVW--------------AANNRAVCWLYLRDLQRSITSLEQLIAANPEANLLDVVVFNLCTLYDLESD--SSGVKKKALLAIISQFASDDFDTSGIKV 601          
BLAST of mRNA_H-elongata_contig8239.15894.1 vs. uniprot
Match: A0A3Q3GH96_9LABR (Trafficking protein particle complex 12 n=2 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3GH96_9LABR)

HSP 1 Score: 78.6 bits (192), Expect = 2.530e-11
Identity = 53/168 (31.55%), Postives = 87/168 (51.79%), Query Frame = 0
Query:  530 RVDVLTRIGRVFLQFGALEDAEVYFRRAENTAV----EPAHDPRILVNNGLLLFSKNDFVAAQESFQRAAAAAAQAEPSGQRDDDWLWAYLDEGAGLLDCALNNLSLALVYSCDVIGAVQTLEGLIRKDPCLYMLDVVVFNLCTLYDLSFDPVASAKKKRTLQAVAQR 693
            RV +L+ IGR+FLQ G ++ AE YF+ AE   +    +P H   +L+N   +  S+N++  A  SF        + +P                      A NN ++ L+Y   +  ++  LEGL+++DP LY+ + V+FNL T+Y+L     ++ KK+  L+AVA R
Sbjct:  633 RVQLLSGIGRIFLQIGDVKTAERYFQDAEKDCLMKGSQPGHTTCVLMNRAFVYLSQNNYSEAHSSFTE----VLKIDPKNP------------------VANNNAAVCLLYLGRLKESLGQLEGLVQQDPALYLHESVLFNLTTMYELESSR-STQKKQALLEAVASR 777          
BLAST of mRNA_H-elongata_contig8239.15894.1 vs. uniprot
Match: A0A5N5N6Q9_PANHP (Uncharacterized protein n=2 Tax=Siluroidei TaxID=1489793 RepID=A0A5N5N6Q9_PANHP)

HSP 1 Score: 78.6 bits (192), Expect = 2.540e-11
Identity = 53/168 (31.55%), Postives = 85/168 (50.60%), Query Frame = 0
Query:  530 RVDVLTRIGRVFLQFGALEDAEVYFRRAENTAVE----PAHDPRILVNNGLLLFSKNDFVAAQESFQRAAAAAAQAEPSGQRDDDWLWAYLDEGAGLLDCALNNLSLALVYSCDVIGAVQTLEGLIRKDPCLYMLDVVVFNLCTLYDLSFDPVASAKKKRTLQAVAQR 693
            RV +L+ IGR+FLQ G +  AE YF+  E    E    P HD  IL+N   +  S+N++  A   F     +  + +P+                     A NN ++ L+Y   +  ++  LE L+++DP LY+ + V+FNL T+Y+L     ++ KK+  L+AVA R
Sbjct:  637 RVQLLSGIGRIFLQIGDIRTAEKYFQEVEKAGEEKGKGPTHDTAILMNRAFVYLSQNNYADAHTCFS----SVLKIDPNNP------------------VANNNAAVCLLYLGRLKESLGQLESLVQQDPALYLHESVLFNLTTMYELESSR-STQKKQALLEAVAGR 781          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8239.15894.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWF7_9PHAE1.370e-14042.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLE2_ECTSI1.370e-10850.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KFR3_9PHAE3.370e-3973.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CFY7_9STRA1.310e-2929.25Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2K5V8_9STRA5.570e-2331.54Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A024G727_9STRA2.490e-2237.37Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
F0WJF3_9STRA1.050e-2137.10Uncharacterized protein AlNc14C121G6682 n=1 Tax=Al... [more]
L8H1C1_ACACA4.630e-1532.95Tetratricopeptide repeat domain containing protein... [more]
A0A3Q3GH96_9LABR2.530e-1131.55Trafficking protein particle complex 12 n=2 Tax=La... [more]
A0A5N5N6Q9_PANHP2.540e-1131.55Uncharacterized protein n=2 Tax=Siluroidei TaxID=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 459..674
e-value: 7.0E-7
score: 30.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 531..630
NoneNo IPR availablePANTHERPTHR21581D-ALANYL-D-ALANINE CARBOXYPEPTIDASEcoord: 203..705
NoneNo IPR availablePANTHERPTHR21581:SF6TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 12coord: 203..705
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 531..601
score: 8.924

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8239contigH-elongata_contig8239:3631..8448 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8239.15894.1mRNA_H-elongata_contig8239.15894.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8239 3557..8477 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8239.15894.1 ID=prot_H-elongata_contig8239.15894.1|Name=mRNA_H-elongata_contig8239.15894.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=708bp
MDQGNGKQGISRQGPLRSITTPPFAGRATLRNSGPLAPALRDSSSNSSVG
SGATTDTQTAPYQHGVPPSLSQPLTYQQQPPIQAVFPYSSPNLAAVADMS
SIGQQPTSRSEAPAFTLTPAPTSSDPLSDLLLSGVHTGRNAPNDRLSNHD
SFHRASNSEFNSRSFPVAQTQAPPFAPEPTPPAWIASVSGDGGTVVGRDH
DGSRAAAPPTPSSSQPMPALPPPPTNYAGSSFATSAKHYHPQQLPRAIPP
PVVTRPFPPTTPPAPVKAAFRTPPASPQEKSLDQLVSEFLTVSAPPAPEP
ADQNLHLSDPNGWVAALGQLARRRAWAYIVDVAGKMLETHRRGGALGLTA
EQVMTLRLRRASGMLRIGKIEEAAEAASEAARGNGHPPLSTVSIAARFVA
ASAKSMLSGVAEEEAIDELTALKLELKSVMDSGVVPPFSNETIEGATVSM
VAAAVWRQRVITSLTNAFVRRGSWRQALGLLETMGEECASSTYAGKRNAR
DVTGKEQTADGALPDGAAEIAGNALVAAARVDVLTRIGRVFLQFGALEDA
EVYFRRAENTAVEPAHDPRILVNNGLLLFSKNDFVAAQESFQRAAAAAAQ
AEPSGQRDDDWLWAYLDEGAGLLDCALNNLSLALVYSCDVIGAVQTLEGL
IRKDPCLYMLDVVVFNLCTLYDLSFDPVASAKKKRTLQAVAQRFRLEDID
ATSFRLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom