prot_H-elongata_contig82387.15892.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig82387.15892.1
Unique Nameprot_H-elongata_contig82387.15892.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length185
Homology
BLAST of mRNA_H-elongata_contig82387.15892.1 vs. uniprot
Match: D8LEK5_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEK5_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 5.370e-42
Identity = 99/169 (58.58%), Postives = 115/169 (68.05%), Query Frame = 0
Query:    7 AQVAGAGEGVG-EESIGRAEASDLLSYVVDVSVTMGSLLQASCFLSAADDVKSGDDGDGSSQQRVSSGVATLAPRLQGTDGEVSPEGLAAALALTFEATLPALQGLLLLRTKSDQVGAMSSSMENRRRLSIARQWLLRCLHGLLGPVFLHPLGLQEASATAEGRGGGVG 174
            A++AGA +G+G    I   EASD+LSYV DV+V++GSLLQAS  + A      G  G          G+  LA RLQG+DGEVSPEGLAAALALTFEATLPAL+G LL  T S +VGA  S    R R  +ARQWLLRCLHGL+GPVFL PLGLQEAS +  G G G G
Sbjct:   89 AKMAGAQDGLGLGPPIDHTEASDVLSYVTDVAVSVGSLLQASSGVRAV-----GSSGXXXXXXXXX-GIGLLAQRLQGSDGEVSPEGLAAALALTFEATLPALEGFLLAPTSSGKVGAPDSESV-RARGRVARQWLLRCLHGLIGPVFLQPLGLQEASPSVAGSGDGDG 250          
BLAST of mRNA_H-elongata_contig82387.15892.1 vs. uniprot
Match: A0A6H5L6J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6J2_9PHAE)

HSP 1 Score: 155 bits (391), Expect = 8.020e-41
Identity = 100/169 (59.17%), Postives = 116/169 (68.64%), Query Frame = 0
Query:    7 AQVAGAGEGVG-EESIGRAEASDLLSYVVDVSVTMGSLLQASCFLSAADDVKSGDDGDGSSQQRVSSGVATLAPRLQGTDGEVSPEGLAAALALTFEATLPALQGLLLLRTKSDQVGAMSSSMENRRRLSIARQWLLRCLHGLLGPVFLHPLGLQEASATAEGRGGGVG 174
            A++AGA +G+G    I   EASD+LSYV DV+V++GSLLQASC + A   V SG  G          G+  LA RLQG+DGEVSPEGLAAALALTFEATLPAL+  LL  T S +VGA  S    R R  +ARQWLLRCLHGL+GPVFL PLGLQEAS +  G   G G
Sbjct:   36 AKMAGAQDGLGLGPPIDHTEASDVLSYVTDVAVSVGSLLQASCGVRA---VGSGAGG----------GIGLLAQRLQGSDGEVSPEGLAAALALTFEATLPALESFLLAPTSSGKVGAPDSESV-RARGRVARQWLLRCLHGLIGPVFLQPLGLQEASPSVAGSWDGDG 190          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig82387.15892.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEK5_ECTSI5.370e-4258.58Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L6J2_9PHAE8.020e-4159.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig82387contigH-elongata_contig82387:244..2326 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig82387.15892.1mRNA_H-elongata_contig82387.15892.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig82387 244..2326 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig82387.15892.1 ID=prot_H-elongata_contig82387.15892.1|Name=mRNA_H-elongata_contig82387.15892.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=185bp
ASVRARAQVAGAGEGVGEESIGRAEASDLLSYVVDVSVTMGSLLQASCFL
SAADDVKSGDDGDGSSQQRVSSGVATLAPRLQGTDGEVSPEGLAAALALT
FEATLPALQGLLLLRTKSDQVGAMSSSMENRRRLSIARQWLLRCLHGLLG
PVFLHPLGLQEASATAEGRGGGVGSTARSEAAGE*
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