prot_H-elongata_contig8224.15880.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8224.15880.1
Unique Nameprot_H-elongata_contig8224.15880.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length1526
Homology
BLAST of mRNA_H-elongata_contig8224.15880.1 vs. uniprot
Match: D7G6H2_ECTSI (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6H2_ECTSI)

HSP 1 Score: 432 bits (1110), Expect = 1.390e-121
Identity = 452/1349 (33.51%), Postives = 613/1349 (45.44%), Query Frame = 0
Query:  151 SDDSS---AGWLSGCPEGFAAVKTPDLKTAMELVDNAL-RHSAEMGRRGASMEPGKVGRGGRGAERKHGKKNSS----------GHVFFRVVVYKRAEETVSTLHLVDLAGGWEPSAEKPMSKKGNKSSPSTSTRRSAVASKDIQSFDAMIAGLVRPNFSLSSDSLRHSTAGQSDQGGGGDESSHIGNHRSDNIEGMDSRWMAPAAAVKTADPSLNRSSSFPRPAPPSHHPLFGSSI-MSAGGGDGGELIEALRPLMSGNARSWLVVSVGGK-KGGGGAAWQVLDVARQATSIATTCIRLRGVAMADLRLLDARTVL--ARGTALSPPPCALNEELGAV-------------------------GTKLGTLACTENFC-----GGERSSAVRFSEPPVERSSESPWPVMKGSRKLDGLNGLEKEDISPVDSSLGEVG----GRTSLNKFLEGFHRGSDA--NGPRTL------------------AGPLFGGITSDASKRDEGTARSTISAKNAYRISAEASQKEIAAAPGLENEIEHIATEDSTTKAQRRVVTQQPISLTHDEVN----CSSLGRAPNGFCSSSVPSIDSTCGDSKG-------------------GALKNGRIDGKETAGERGDYMMTPPLVVAAAACTKRNINRMVSELLEDVLP-------------------ASRRASAGELVGVG-GTTQETADIGDPESRRTYTISCQAGRAVAPPXXXXXXXXSPHTQAAKHLRPSGPRPRSSSESAGKQDMLFTPIEVLMHAPAGSEDYDLQRQLPQRQTVH--HPGMRYENQQSKLADSTSSGGKQNCHSRGG-RGNGENIR--GPRKTIVQSRVSVVASTVKSEKPACAGNPSHGKPVEGKFVQSGHCASDCSNINAFTQSWEGGGLVKNANSVPNGG---TKVPQARPVAKPPITAKEAATRSVRISDLWEAHG------GMCDEGREPHAEVLQQRSNAALLRVVQEQEERAKQMQCRFEAKENDWLERVTALEAELEGFRAEAVEMNGRLKRAEALSPSVDLFASYEAQMEILEAENADLRDANISLELRLLDLLREYSSSTASAAAVASSRAASATGVTAWPGE------------------IVQEKRMDTSRGDGDLPLEGDDRSAWPAAIGVRKFMANTRLTSGAGMRSE----------------------RASPAYTTALRDLRRRLKEAEREVNELRLGQAALEKRERQCQARLHIFSEHKSRVGELSRRERQHEADLTESRLECARAEAVAERNAAEIDRLREGQAALKVDKDALILELAEERKKSRCFDEDRRAYGHIRRFIEQHAGGRPAEWDLEI 1330
            SDDSS   AGW +G PEGF +V+ P+L TA+ELVD A  R SA   +R  +      G  G+G                      HVFFRVVVY   EETVSTLH+VDLAGGWEP +EKP  ++G+K S   S R SAV S++  SFDAM+ GLV             +TA   D+    D   + G+     +E     + A  A    A+ +   S S P P PP+H P+FGS    + GGG GG+L+EALRPL+SGN R+WLVVSVGG  K GGGAAW+ LDVAR+AT I+TTCIRLRGVA+ DLRL     VL    G+  S P    +  +  V                         G+ L   +  E        GG+ S+   + EP  E+   +P  ++     L GL+  E+   S      G+ G    G +S++ FL GF RG     + PR +                  A P    I +   +R +G     +  K     S  +  K  AA+          A   S + +++R   Q    L    +      +++G  P+    S+     +  G ++G                     L+N     K  AGE G  ++       A +  + NI+RM+S LLE+VLP                         A   VGV    T   +   D  +R++ +      R   PP        S   Q+A       P  +S+ +SA       TPIEVLM  PAG      + +  + Q  H        +   +  A+++    ++  H  G  +G    +R  G    +     S+     +       G+ + G+        +G   S  S  N+            ++  +  GG   T         +      +    S R+ +   AH       GM DEG       L  R +AALLRVV+EQE+R KQM  RFEAKE DWLERVT LEA+LEG RAEAVE  GRL+RAE  SPS ++F  YEA   ILEAEN  LRD NISLELRLLD LR+            S+  AS+TG T    E                  +V  +   T   +G+   E   +   P    +++  A+ +     G  S                         +P     L+DLRRRLKEAE E  ++R  +A ++KR+R CQA+L    E +S++ E   RER+HE  LT SRLE ARAE +AE  AAE++ L + QAAL  +++ L+L LAEERKKSR FDEDR AYGHIRRFIE+HAGGRPAEWD E+
Sbjct:  397 SDDSSSTGAGWPTGYPEGFLSVRAPNLSTALELVDVAQSRCSACRRQRATATSEAAKGSRGKGXXXXXXXXXXXXXXXXXXXXXSHVFFRVVVYNTLEETVSTLHIVDLAGGWEPPSEKPAGRRGSKCSGMGSVRPSAV-SREWNSFDAMMVGLVPXXXXX-----XXATAVPPDRVN--DSGCNCGH-----VEKGGIAFDAGGATAVNAEAAA--SESRPAPPPPAH-PVFGSPKGKTFGGGGGGKLVEALRPLISGNTRTWLVVSVGGDGKCGGGAAWRALDVARRATGISTTCIRLRGVALTDLRLRSPSEVLPVVDGSHTSNPEDEFSASVSGVSNRRRGRTRASASTTSVDTVTALTVGSPLNETSRVEQTLLSTAGGGQNSTTFGYPEP--EQVLHAPISLVP---LLSGLSEGERSLFS-FGERTGDGGESSAGSSSVDDFLAGFVRGXXXXXDRPRLISSSGVLQADDMLENEPEQATPAGQVIAAPLGERGDGNRSDVVKGKP----SRTSKPKAFAAS----------AVRGSLSFSEQRQHDQHAPQLQGSRLRPGGRAATVGPKPSAGTPSTTSFTYNGSGSARGFENDGGEEDDNDPPATLRESRLRNEAFSRKVAAGEPG--VIDAEAESPAESRARENIDRMMSLLLEEVLPDRXXXXXXXXXXXXXXXXXXXXXXXAASPVGVSRDRTAAASATADAVARQSSSFRSSLPRGPTPPPVGRP---SDDDQSA-------PAMQSTPDSA----TFLTPIEVLMRTPAGGASIGCKSKREEEQRGHCRQCTASDDTTPTSRAETSRRAKEETLHPPGWVQGQAPKVRAVGRSGRMADEHTSMPTPKARDIVGRDTGDANIGRRSRAASSGTGDALSRLSRGNSSGXXXXXXXXXXSSRGLSTGGARQTSTSDRNTDERDGGECMKVEVGSARVENNG-AHAFEDKLDGMEDEGG-----ALLGRHHAALLRVVREQEDRGKQMIRRFEAKECDWLERVTTLEADLEGLRAEAVETRGRLRRAEESSPSAEVFERYEAHTGILEAENTSLRDQNISLELRLLDTLRQ------------STTTASSTGRTTVATETNSHLSLSGCQQHRHHAALVSTRATATGEKEGNQDSEICPKQHKPGTGALQQAEASAKACVDGGATSRFRVDGRVPPSGSVGEAGKPWPSGGTPMCAAVLKDLRRRLKEAELEAKKMRAERAGMDKRDRLCQAQLRTLKEQRSKLREFLLREREHEVKLTASRLESARAEVIAEDKAAEVEHLLDNQAALVAEREDLVLALAEERKKSRQFDEDRVAYGHIRRFIERHAGGRPAEWDEEV 1675          
BLAST of mRNA_H-elongata_contig8224.15880.1 vs. uniprot
Match: A0A6H5L684_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L684_9PHAE)

HSP 1 Score: 421 bits (1083), Expect = 4.910e-118
Identity = 442/1321 (33.46%), Postives = 604/1321 (45.72%), Query Frame = 0
Query:  151 SDDSS---AGWLSGCPEGFAAVKTPDLKTAMELVDNALRHSAEMGRRGASMEPGKVGRGGRGA------------ERKHGKKNSSGHVFFRVVVYKRAEETVSTLHLVDLAGGWEPSAEKPMSKKGNKSSPSTSTRRSAVASKDIQSFDAMIAGLV-RPNFSLSSDSLRHSTAGQSDQGGGGDESSHIGNHRSDNIEGMDSRWMAPAAAVKTADPSLNRSSSFPRPAPPSHHPLFGSSI-MSAGGGDGGELIEALRPLMSGNARSWLVVSVGGK-KGGGGAAWQVLDVARQATSIATTCIRLRGVAMADLRLLDARTVL--ARGTALSPPPCALNEELGA------VGTKLGTLACTENFCGGERSSAVRFSEPPVERSSESPWPVMKGSRKLDGLNGLEKEDISPVDSSLGEV-----GGRTSLNKFLE-----GFHRGSDANGPRTLAGPLFGGITSDASKR---DEGTARSTISAKNAYRISAEASQKEIAAAPGLENEIEHIATE------DSTTKAQRRVVTQQPISLTHDEVN-----------------CSSLGRAPNGFCSSSVPSIDSTCGDSKG-------------------GALKNGRIDGKETAGERGDYMMTPPLVVAAAACTKRNINRMVSELLEDVLP---------ASRRASAGELVGVGGTTQETADIGDPESRRTY-TISCQAGRAVAPPXXXXXXXXSPHTQAAKHLRPSGPRPRSSSESAGKQDMLFTPIEVLMHAPAGSEDYDLQRQLPQRQTVHHPGMRY-----ENQQSKLADSTSSGGKQNCHSRGGRGNGENIRGPRKTIVQSRVSVVASTVKSEKPACAGNPSHGKPVEGKFVQSGHCASDCSNINAFTQSWEGGG---------LVKNANSVPNGGTK-VPQARPVAKPPITAKEAATRSVRISD-----LWEAHGGMCDEGREPHAEVLQQRSNAALLRVVQEQEERAKQMQCRFEAKENDWLERVTALEAELEGFRAEAVEMNGRLKRAEALSPSVDLFASYEAQMEILEAENADLRDANISLELRLLDLLREYSSSTASAAAVASSRAASATGVTAWPGEIVQEKR-------MDTSRGD----------------GDLPLEGDDRSAWPAAIG--VRKFMANTRL-TSGAGMRSER-----ASPAYTTALRDLRRRLKEAEREVNELRLGQAALEKRERQCQARLHIFSEHKSRVGELSRRERQHEADLTESRLECARAEAVAERNAAEIDRLREGQAALKVDKDALILELAEERKKSRCFDEDRRAYGHIRRFIEQHAGGRPAEWDLE 1329
            SDDSS   AGW +G PEGF +V+ P+L TA+ELVD A    +   RR  ++   +  +G RG                        HVFFRVVVY   EET STLH+VDLAGGWEP +EKP  ++G+K S   + R SAV S++  SFDAM+ GLV        + ++ H+    SD         + G+     I     R    A AVK A  +   S S P P PP+ HP+FGS    + GGG GG+L+E LRPL+SGN R+WLVVSVGG  KGGGGAAW+ LDVAR+AT I+TTCIRLRGVA+ DLRL  +  VL  A G   S P    +  +        V T+  T A + +  G   +     +EP   R  +S      G +        E E +     SLG        G  SL  F E     G  R   ++    LAG + GG   D   R     G  ++ ++ +N    +  A Q  IAAA G   +      E      +S   A    V Q  +S      +                  +++G  P+    S+     +  G  +G                     L++     K  AGE G  +        A +  + NI+ M+S LLE+VLP                             A +    +   + T    A ++ +          SP          S P  +++ + A       TPIEVLM  PAG      +    +++       R      +   +  A+++    +++ H  G       + G    +     S  ++  ++  P        G+   G  V+    A+     +A ++   G              ++  +  GG +      P  +           S R        L +   GM DEG       L  R +AALLRVV+EQE+R KQM  RFEAKE DWLERVT LEA+L+G RAEAVE  GRL+RAE  SPS ++F  YEA + ILEAEN  LRD NISLELRLLD+LR+   STA+A++   +   + T     P    Q +          T+ G+                G   L+  D SA     G    +F  +  +  SG+   + +      +P     L+DLRRRLKEAE E  E+R  +AA++KR+R CQA+L    E +S++ E   RER+ EA LT SRLE ARAE  AE  AAE++ L + QAAL  +++ L+L LAEERKKSR FDEDR AYGHIRRFIE+HAGGRPAEWD E
Sbjct:  414 SDDSSSTGAGWPTGYPEGFLSVRAPNLSTALELVDAAQSRCSAC-RRQRAIATSEAAKGSRGKGXXXXXXXXXXXXXXXXXXXXXSHVFFRVVVYNTLEETASTLHMVDLAGGWEPPSEKPTGRRGSKCSGMGTVRPSAV-SREWNSFDAMMVGLVPXXXXXXXATAVPHNRVNGSD--------CNCGHIEKGGIACDADR----ATAVKAAAAA---SGSRPAP-PPTAHPVFGSPKGKTFGGGGGGKLVETLRPLISGNTRTWLVVSVGGDGKGGGGAAWRALDVARRATGISTTCIRLRGVALTDLRLRSSSEVLPVADGCGTSNPEDDFSASINGASNRRRVRTRASTSATSVDI-GTALTVGSPLNEP--SRVEQSLLSTAGGGQNSTTFGSPEPEQVLHAPISLGPSLSGLSEGERSLFSFRERTGDGGEERAGSSSVDEFLAGFVRGGGDDDDRPRPMSSGGVVQADVTLENEPEQATPAGQL-IAAALGGRGDENRSGVEKGKPSRNSKPTAFAASVVQGSLSFGEQRQHYQHAPQLQGSRLRPGGRAATVGPKPSADTPSTTSFAYNGGGSPRGFENDGXXXXXXXXXTTLRESRLRSEAFSRKVAAGEPG--VENAEAESPAESRARENIDLMMSSLLEEVLPDRXXXXXXXXXXXXXXXXXXXXXXXAASPAGVSRDRTAAAFATADAVARQSSSSRSPLPRGPTSPSVARRSDDDHSAPAMQNTPDHA----TFLTPIEVLMRTPAGGGSIGCKSTREEKREEKQGHCRQCTASDDATPTSRAETSRRANEESLHPSGW------VHGQAPNVRAVGTSGQSADERTSIPTPLAGDFVGRDTGGTNVRHRSRAASSGTGDALSRLSRGSSSXXXXXXXXXXXSSRGLSTGGARQTTDQNPDERDGGECMNVEVGSARAEKNGAHALEDELDGMEDEGG-----ALLGRHHAALLRVVREQEDRGKQMIRRFEAKECDWLERVTTLEADLQGLRAEAVETRGRLRRAEESSPSAEVFKRYEAHVGILEAENTSLRDRNISLELRLLDILRQ---STAAASSRGGTTLETETNSHLSPSGCHQHQHHAALFSTRATTAGEKEGNKDSEICPKQHKYGTGALQQSDASATACVDGGTTSRFRVDGSVPVSGSVGEAGKPWASGGAPMCAAVLKDLRRRLKEAELEAKEMRAERAAVDKRDRLCQAQLRTLKEQRSKLREFMLRERELEAKLTASRLESARAEVAAEDKAAEVEHLLDNQAALVAEREDLVLALAEERKKSRQFDEDRVAYGHIRRFIERHAGGRPAEWDKE 1692          
BLAST of mRNA_H-elongata_contig8224.15880.1 vs. uniprot
Match: W7TGU9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TGU9_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.210e-10
Identity = 93/341 (27.27%), Postives = 144/341 (42.23%), Query Frame = 0
Query:  971 RSVRISDLWEAHGGMCDEGREPHAEVLQQRSNAA---LLRVVQEQEERAKQMQCRFEAKENDWLERVTALEAELEGFRAEAVEMNGRLKRAEALSPSVDLFASYEAQMEILEAENADLRDANISLELRLLDLLREYSSSTASAAAVASSRAASATGVTAWPGEIVQEKRMDTSRGDGDL--------PLEGDDRSAWPAAIGVRK---------FMANTRLTSGAGMRSERASPAYTTALRDLRRRLKEAEREVNELRLGQAALEKRERQCQARLHIFSEHKSRVGELSRRERQHEADLTESRLECARAEAVAERNAAEIDRLREGQAALKVDKDALILEL 1291
            R+    +L +A      E +   + + +  S+ A   LLR++ E++ER +  + R +  E    E     E  +   R E  E+ G L+R  + S   D+F  YEA +  +E E   LRD N+ LE   LD  ++   S                           + R D   G+GD         P     R    +  G  K         F + T   S A MR   + PA T  L  L+ ++KE +R+VN+L+     L +RERQ   +  +     +RV ++    +  E+ L  SRL+ ARAEA  E    EI  LR+ +A L +D+D  + EL
Sbjct:  196 RTTNYQELHQAQPSWAPETQHEESSLARPPSDIASGNLLRMLYEEKERGQGQKARIQGLEVALAETTQEKEVAMASARLEIHELRGMLRRVASESTFSDVFTLYEAHIARVEKEANVLRDRNVHLEAWRLDQRQQSEESRG-------------------------QGRADACGGEGDSQGCNRPDRPTPSPSRKNRKSLYGATKPAPHNAQDTFWSPTSALSTA-MRMNGSQPAPTGVLVALKGKVKELQRQVNDLKQETGELRRRERQFLVQKRMVETTWARVQKVQFMAKGLESSLASSRLDGARAEARLEEAEGEIRALRQREAVLVMDRDRCLQEL 510          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8224.15880.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G6H2_ECTSI1.390e-12133.51Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
A0A6H5L684_9PHAE4.910e-11833.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TGU9_9STRA1.210e-1027.27Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1034..1061
NoneNo IPR availableCOILSCoilCoilcoord: 1068..1095
NoneNo IPR availableCOILSCoilCoilcoord: 1002..1029
NoneNo IPR availableCOILSCoilCoilcoord: 1183..1217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8224contigH-elongata_contig8224:2549..9555 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8224.15880.1mRNA_H-elongata_contig8224.15880.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8224 1570..9832 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8224.15880.1 ID=prot_H-elongata_contig8224.15880.1|Name=mRNA_H-elongata_contig8224.15880.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1526bp
MNASSKAAHEAVDEKSPTSNFCAVEDGGHGNTGIGSGATLRGSTSEVAES
SGGSKTLKIDEYSRRQGQRGCDRSCRETQTAVVVAISAWEVRKKSVIDLL
SPAEFPAPNSSGRGNDGSGNDKMSRGRNRSRNGGGGCGKKNRGRSRGRSH
SDDSSAGWLSGCPEGFAAVKTPDLKTAMELVDNALRHSAEMGRRGASMEP
GKVGRGGRGAERKHGKKNSSGHVFFRVVVYKRAEETVSTLHLVDLAGGWE
PSAEKPMSKKGNKSSPSTSTRRSAVASKDIQSFDAMIAGLVRPNFSLSSD
SLRHSTAGQSDQGGGGDESSHIGNHRSDNIEGMDSRWMAPAAAVKTADPS
LNRSSSFPRPAPPSHHPLFGSSIMSAGGGDGGELIEALRPLMSGNARSWL
VVSVGGKKGGGGAAWQVLDVARQATSIATTCIRLRGVAMADLRLLDARTV
LARGTALSPPPCALNEELGAVGTKLGTLACTENFCGGERSSAVRFSEPPV
ERSSESPWPVMKGSRKLDGLNGLEKEDISPVDSSLGEVGGRTSLNKFLEG
FHRGSDANGPRTLAGPLFGGITSDASKRDEGTARSTISAKNAYRISAEAS
QKEIAAAPGLENEIEHIATEDSTTKAQRRVVTQQPISLTHDEVNCSSLGR
APNGFCSSSVPSIDSTCGDSKGGALKNGRIDGKETAGERGDYMMTPPLVV
AAAACTKRNINRMVSELLEDVLPASRRASAGELVGVGGTTQETADIGDPE
SRRTYTISCQAGRAVAPPPSPPPPPPSPHTQAAKHLRPSGPRPRSSSESA
GKQDMLFTPIEVLMHAPAGSEDYDLQRQLPQRQTVHHPGMRYENQQSKLA
DSTSSGGKQNCHSRGGRGNGENIRGPRKTIVQSRVSVVASTVKSEKPACA
GNPSHGKPVEGKFVQSGHCASDCSNINAFTQSWEGGGLVKNANSVPNGGT
KVPQARPVAKPPITAKEAATRSVRISDLWEAHGGMCDEGREPHAEVLQQR
SNAALLRVVQEQEERAKQMQCRFEAKENDWLERVTALEAELEGFRAEAVE
MNGRLKRAEALSPSVDLFASYEAQMEILEAENADLRDANISLELRLLDLL
REYSSSTASAAAVASSRAASATGVTAWPGEIVQEKRMDTSRGDGDLPLEG
DDRSAWPAAIGVRKFMANTRLTSGAGMRSERASPAYTTALRDLRRRLKEA
EREVNELRLGQAALEKRERQCQARLHIFSEHKSRVGELSRRERQHEADLT
ESRLECARAEAVAERNAAEIDRLREGQAALKVDKDALILELAEERKKSRC
FDEDRRAYGHIRRFIEQHAGGRPAEWDLEIDEEREQETFHRNRLGGHASR
HDGGSRCGGVGRHAAFETRGGDKVPYERVSTRNCERIFAEEDNCIVGRSG
SPFVVAKRVLTREAQVRGDKYCDAFQRERKLSDGWDGGTRDYRYGDSYAQ
TLSATEITPRGGESGPRTSRASSYKANINTLTMRDTRVKGEYELTDKEQE
INRKEDRDGSRSFIRGWRAQRTTSG*
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