prot_H-elongata_contig82185.15877.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig82185.15877.1
Unique Name	prot_H-elongata_contig82185.15877.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	99

Homology

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BLAST of mRNA_H-elongata_contig82185.15877.1 vs. uniprot
Match: A0A6V1VDI3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VDI3_HETAK)

HSP 1 Score: 124 bits (311), Expect = 3.780e-34
Identity = 56/93 (60.22%), Postives = 71/93 (76.34%), Query Frame = 0

Query:    6 QVFDDPPCSCQNGICTTCAGLIREGTKGESYKLAIDALGEDQREKGFTLTCQTYPCGPGLKVLLNQYDTVYEMQYGQYEVKVDEEPKKLFGIF 98
            +VFDDPP SC+NG+CTTC+  I EG +GE+YKLA+  LGE    +GFT++CQT+  GPG+K+ LNQYDTVYEMQYGQYE    ++ KK F  F
Sbjct:   77 KVFDDPPFSCRNGVCTTCSCRIVEGKEGENYKLAVHGLGETALSQGFTMSCQTHVTGPGVKIELNQYDTVYEMQYGQYEKGTAKDTKKSFFGF 169

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BLAST of mRNA_H-elongata_contig82185.15877.1 vs. uniprot
Match: A0A7S2XX00_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX00_9STRA)

HSP 1 Score: 115 bits (287), Expect = 7.210e-31
Identity = 54/93 (58.06%), Postives = 65/93 (69.89%), Query Frame = 0

Query:    6 QVFDDPPCSCQNGICTTCAGLIREGTKGESYKLAIDALGEDQREKGFTLTCQTYPCGPGLKVLLNQYDTVYEMQYGQYEVKVDEEPKKLFGIF 98
            ++F D PCSC+NGICTTCA ++  G   ES  LA+  L  +QREKG+TL CQ+Y  GPGLKV L +YD VYE QYG+YE    EE KK  GIF
Sbjct:   50 ELFGDVPCSCRNGICTTCAAMVTGGE--ESLTLAVHGLSAEQREKGYTLCCQSYATGPGLKVELGKYDEVYEDQYGKYERNQQEEKKKFLGIF 140

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BLAST of mRNA_H-elongata_contig82185.15877.1 vs. uniprot
Match: A0A835Z8W8_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8W8_9STRA)

HSP 1 Score: 112 bits (281), Expect = 1.780e-29
Identity = 55/97 (56.70%), Postives = 70/97 (72.16%), Query Frame = 0

Query:    6 QVFDDPPCSCQNGICTTCAGLIREGTKGESYKLAIDALGEDQREKGFTLTCQTYPCGPGLKVLLNQYDTVYEMQYGQYEV-KVDEEP---KKLFGIF 98
             VFDDPP SC+NG+CTTCAG I EG   +S+ +A+  LG D    GFTLTCQTYP GPGLKV LN+YD VY  QYG++E  ++D+     +K+FG+F
Sbjct:   86 MVFDDPPFSCRNGVCTTCAGFIEEGR--DSHLMAVHGLGRDILATGFTLTCQTYPTGPGLKVALNKYDEVYWEQYGKHEKSELDKRAAGERKVFGLF 180

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BLAST of mRNA_H-elongata_contig82185.15877.1 vs. uniprot
Match: A0A4D9D4I2_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D4I2_9STRA)

HSP 1 Score: 111 bits (277), Expect = 7.540e-29
Identity = 52/95 (54.74%), Postives = 65/95 (68.42%), Query Frame = 0

Query:    6 QVFDDPPCSCQNGICTTCAGLIREGTKGESYKLAIDALGEDQREKGFTLTCQTYPCGPGLKVLLNQYDTVYEMQYGQYEVKVDEE--PKKLFGIF 98
            + F DPPC C+NG+CTTCA  +  G  G S+  AI++L  +Q+E GF L+CQTYPCGPGL+V LN  + VYE QY +YE K  EE   KK F IF
Sbjct:   88 EAFGDPPCMCRNGVCTTCAAEVTRGGHG-SWVAAIESLSPEQQESGFILSCQTYPCGPGLEVRLNAQEEVYESQYAKYETKAHEELEKKKGFNIF 181

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BLAST of mRNA_H-elongata_contig82185.15877.1 vs. uniprot
Match: A0A4D9D796_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D796_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.640e-28
Identity = 52/89 (58.43%), Postives = 60/89 (67.42%), Query Frame = 0

Query:   10 DPPCSCQNGICTTCAGLIREGTKGESYKLAIDALGEDQREKGFTLTCQTYPCGPGLKVLLNQYDTVYEMQYGQYEVKVDEEPKKLFGIF 98
            D PCSC+NGICTTCAG +      +S K AI  L  +Q + GF LTCQT+PCGPGL+V L  YDTVYE QYGQYE K   E K  F +F
Sbjct:   85 DVPCSCRNGICTTCAGRVIANP--DSKKEAIHGLSAEQSKNGFVLTCQTHPCGPGLEVELGMYDTVYESQYGQYEKKATTEQKSKFNVF 171

[Close]

BLAST of mRNA_H-elongata_contig82185.15877.1 vs. uniprot
Match: A0A0G4EXA3_VITBC (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EXA3_VITBC)

HSP 1 Score: 104 bits (260), Expect = 6.600e-27
Identity = 45/78 (57.69%), Postives = 60/78 (76.92%), Query Frame = 0

Query:    7 VFDDPPCSCQNGICTTCAGLIREGTKGESYKLAIDALGEDQREKGFTLTCQTYPCGPGLKVLLNQYDTVYEMQYGQYE 84
            V++DPPC C+NG+CT+CAG I  G  GE+Y +  D+L E  ++KG+ LTCQTY CGPGLKV LN+ + VY MQYG++E
Sbjct:   48 VWEDPPCDCRNGVCTSCAGRIVGGKLGEAYVINRDSLEEVTKDKGYVLTCQTYVCGPGLKVELNKNEEVYGMQYGRFE 125

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BLAST of mRNA_H-elongata_contig82185.15877.1 vs. uniprot
Match: A0A835Z7P0_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7P0_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.960e-24
Identity = 49/97 (50.52%), Postives = 63/97 (64.95%), Query Frame = 0

Query:    7 VFDDPPCSCQNGICTTCAGLIREGTKGESYKLAIDALGEDQREKGFTLTCQTYPCGPGLKVLLNQYDTVYEMQYGQY-----EVKVDEEPKKLFGIF 98
            VFDDPP SC+NG+C+TCAG I  G     Y  A+  LG+D   +G+ LTCQTYP GPG+KV LN+ D VY  QYG++     E K+     K+FG+F
Sbjct:   78 VFDDPPNSCRNGVCSTCAGHIDGGANSVRY--AVSGLGQDLLGEGYALTCQTYPAGPGVKVSLNKMDEVYMQQYGKHSEEEQERKMSGGKTKVFGMF 172

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BLAST of mRNA_H-elongata_contig82185.15877.1 vs. uniprot
Match: UPI0019A12625 (2Fe-2S iron-sulfur cluster binding domain-containing protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=UPI0019A12625)

HSP 1 Score: 64.7 bits (156), Expect = 2.120e-11
Identity = 34/75 (45.33%), Postives = 46/75 (61.33%), Query Frame = 0

Query:   12 PCSCQNGICTTCAGLIREGTKGESYKLAIDALGEDQREKGFTLTCQTYPCGPGLKVLLNQYDTVYEMQYGQYEVK 86
            P SC  GICTTCA  I EGT  +S  + + A   + RE+G+ L C  YP    LKV   + DTVY++Q+GQ++ K
Sbjct:   38 PNSCNAGICTTCAAQITEGTVEQSDAMGVSA---ELREQGYALLCVAYPRSD-LKVETEKEDTVYQLQFGQFQKK 108

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BLAST of mRNA_H-elongata_contig82185.15877.1 vs. uniprot
Match: A0A1Q8ZI63_9CYAN (Ferredoxin n=1 Tax=Leptolyngbya sp. 'hensonii' TaxID=1922337 RepID=A0A1Q8ZI63_9CYAN)

HSP 1 Score: 60.8 bits (146), Expect = 6.780e-10
Identity = 34/79 (43.04%), Postives = 46/79 (58.23%), Query Frame = 0

Query:    8 FDDPPCSCQNGICTTCAGLIREGTKGESYKLAIDALGEDQREKGFTLTCQTYPCGPGLKVLLNQYDTVYEMQYGQYEVK 86
             D  P SC  G+CTTCA  + EGT  +S  + I     + RE+GF L C +YP    LKV   + DTVY +Q+GQ++ K
Sbjct:   35 LDFLPNSCNAGVCTTCAAQLIEGTVDQSDGMGI---APEIREQGFALLCVSYPRSD-LKVETEKEDTVYYLQFGQFQKK 109

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BLAST of mRNA_H-elongata_contig82185.15877.1 vs. uniprot
Match: A0A0D6AKF1_9CHRO (Soluble [2Fe-2S] ferredoxin n=1 Tax=Geminocystis sp. NIES-3709 TaxID=1617448 RepID=A0A0D6AKF1_9CHRO)

HSP 1 Score: 60.5 bits (145), Expect = 1.290e-9
Identity = 33/74 (44.59%), Postives = 43/74 (58.11%), Query Frame = 0

Query:   10 DPPCSCQNGICTTCAGLIREGTKGESYKLAIDALGEDQREKGFTLTCQTYPCGPGLKVLLNQYDTVYEMQYGQY 83
            +PP SC+NG CTTCA  I EG   E Y+     L  D ++KG+ L C +YP    L V     D VYE+Q+G+Y
Sbjct:   38 EPPFSCRNGACTTCAVKIIEG---EVYQPEAMGLSPDLQKKGYALLCVSYPRS-NLVVETQDEDEVYELQFGRY 107

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig82185.15877.1 vs. uniprot

BLAST of mRNA_H-elongata_contig82185.15877.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6V1VDI3_HETAK	3.780e-34	60.22	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A7S2XX00_9STRA	7.210e-31	58.06	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A835Z8W8_9STRA	1.780e-29	56.70	2Fe-2S ferredoxin-type domain-containing protein n...	[more]
A0A4D9D4I2_9STRA	7.540e-29	54.74	2Fe-2S ferredoxin-type domain-containing protein n...	[more]
A0A4D9D796_9STRA	1.640e-28	58.43	2Fe-2S ferredoxin-type domain-containing protein n...	[more]
A0A0G4EXA3_VITBC	6.600e-27	57.69	2Fe-2S ferredoxin-type domain-containing protein n...	[more]
A0A835Z7P0_9STRA	1.960e-24	50.52	2Fe-2S ferredoxin-type domain-containing protein n...	[more]
UPI0019A12625	2.120e-11	45.33	2Fe-2S iron-sulfur cluster binding domain-containi...	[more]
A0A1Q8ZI63_9CYAN	6.780e-10	43.04	Ferredoxin n=1 Tax=Leptolyngbya sp. 'hensonii' Tax...	[more]
A0A0D6AKF1_9CHRO	1.290e-9	44.59	Soluble [2Fe-2S] ferredoxin n=1 Tax=Geminocystis s...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 6..89 e-value: 4.1E-11 score: 44.5
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 12..61 e-value: 8.5E-7 score: 28.8
IPR006058	2Fe-2S ferredoxin, iron-sulphur binding site	PROSITE	PS00197	2FE2S_FER_1	coord: 15..23
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 10..77

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig82185	contig	H-elongata_contig82185:466..1507 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig82185.15877.1	mRNA_H-elongata_contig82185.15877.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig82185 466..1507 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig82185.15877.1 ID=prot_H-elongata_contig82185.15877.1|Name=mRNA_H-elongata_contig82185.15877.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=99bp
MYPCLQVFDDPPCSCQNGICTTCAGLIREGTKGESYKLAIDALGEDQREK
GFTLTCQTYPCGPGLKVLLNQYDTVYEMQYGQYEVKVDEEPKKLFGIF*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012675	Beta-grasp_dom_sf
IPR001041	2Fe-2S_ferredoxin-type
IPR006058	2Fe2S_fd_BS
IPR036010	2Fe-2S_ferredoxin-like_sf