prot_H-elongata_contig82099.15874.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig82099.15874.1
Unique Name	prot_H-elongata_contig82099.15874.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	117

Homology

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BLAST of mRNA_H-elongata_contig82099.15874.1 vs. uniprot
Match: D8LBJ3_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBJ3_ECTSI)

HSP 1 Score: 129 bits (323), Expect = 8.190e-33
Identity = 70/108 (64.81%), Postives = 79/108 (73.15%), Query Frame = 0

Query:    1 ERFFGLKNFGNTCYCNSVLQALYFCKPLRYHLAQVSEENASNSGDWGVMNDESVKAEKADNENSVLFQLAELFSSISKQKRRSGQLAPKEFLRTIRERNKKFRGKMQQ 108
            ERFFGL+NFGNTCYCNSVLQALYFC+PLR+HLAQV EE+ S  G                +  +VL +LAELFSSIS QKRRSG LAP EFLRT+RERN+ FRG  QQ
Sbjct:   25 ERFFGLENFGNTCYCNSVLQALYFCEPLRHHLAQVREEDTSG-GXXXXXXXXXXXXXXXXSGKTVLSELAELFSSISNQKRRSGHLAPTEFLRTLRERNELFRGNRQQ 131

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BLAST of mRNA_H-elongata_contig82099.15874.1 vs. uniprot
Match: A0A453IYV5_AEGTS (USP domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453IYV5_AEGTS)

HSP 1 Score: 98.2 bits (243), Expect = 8.230e-24
Identity = 52/114 (45.61%), Postives = 72/114 (63.16%), Query Frame = 0

Query:    1 ERFFGLKNFGNTCYCNSVLQALYFCKPLRYHLAQVSEENASNSGDWGVMNDESVKAEKADNENSVLFQLAELFSSISKQKRRSGQLAPKEFLRTIRERNKKFRGKMQQVLLFFL 114
            ER+FGL+NFGNTCYCNSVLQALYFC P R  L +    N S S                D E ++L  LA+LFS IS QK+++G +APK F++ ++++N+ FR  M QV+ + +
Sbjct:   20 ERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKSAS----------------DGEENMLTCLADLFSQISNQKKKTGVIAPKRFIQRLKKQNELFRSYMHQVIHYVM 117

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BLAST of mRNA_H-elongata_contig82099.15874.1 vs. uniprot
Match: A0A5A7QT99_STRAF (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Orobanchaceae TaxID=91896 RepID=A0A5A7QT99_STRAF)

HSP 1 Score: 100 bits (249), Expect = 8.260e-23
Identity = 56/114 (49.12%), Postives = 70/114 (61.40%), Query Frame = 0

Query:    1 ERFFGLKNFGNTCYCNSVLQALYFCKPLRYHLAQVSEENASNSGDWGVMNDESVKAEKADNENSVLFQLAELFSSISKQKRRSGQLAPKEFLRTIRERNKKFRGKMQQVLLFFL 114
            ER+FGL+NFGNTCYCNSVLQALYFC P R HL +    N  N G+                + ++L  LAELFS IS QK+++G +APK F++ IR  N+ FRG M Q    FL
Sbjct:   28 ERYFGLENFGNTCYCNSVLQALYFCAPFREHLLEYYSNN-KNQGEA---------------DENILTCLAELFSQISSQKKKTGVIAPKRFVQRIRRENENFRGYMHQDAHEFL 125

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BLAST of mRNA_H-elongata_contig82099.15874.1 vs. uniprot
Match: A0A835Z200_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z200_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.050e-22
Identity = 56/108 (51.85%), Postives = 75/108 (69.44%), Query Frame = 0

Query:    1 ERFFGLKNFGNTCYCNSVLQALYFCKPLRYHLAQVSEENASNSGDWGVMNDESVKAEKADNENSVLFQLAELFSSISKQKRRSGQLAPKEFLRTIRERNKKFRGKMQQ 108
            ER++GL+NFGNTCYCNSV+QALYFC PLR  L     +N+S +    VM   S +        S+L+QLAELF+ I+  KR SG++AP+ F++T+RE N+ FRG MQQ
Sbjct:   25 ERYYGLENFGNTCYCNSVMQALYFCGPLRTELLARHTQNSSAT----VMATGSSQYPAG----SLLYQLAELFAVITNTKRLSGRVAPQAFMQTLRETNELFRGNMQQ 124

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BLAST of mRNA_H-elongata_contig82099.15874.1 vs. uniprot
Match: A0A834ZPR8_9MAGN (USP domain-containing protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A834ZPR8_9MAGN)

HSP 1 Score: 94.7 bits (234), Expect = 1.880e-22
Identity = 51/109 (46.79%), Postives = 70/109 (64.22%), Query Frame = 0

Query:    1 ERFFGLKNFGNTCYCNSVLQALYFCKPLRYHLAQVSEENASNSGDWGVMNDESVKAEKADNENSVLFQLAELFSSISKQKRRSGQLAPKEFLRTIRERNKKFRGKMQQV 109
            ER+FGL+NFGNTCYCNSVLQALYFC P R  L +    N  N+GD                E ++L  LA+LF+ IS QK+++G +APK F++ ++++N+ FR  M QV
Sbjct:   20 ERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYSNN-KNTGDA---------------EENLLTCLADLFTQISSQKKKTGVIAPKRFVQRVKKQNELFRSYMHQV 112

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BLAST of mRNA_H-elongata_contig82099.15874.1 vs. uniprot
Match: A0A453QTS9_AEGTS (USP domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453QTS9_AEGTS)

HSP 1 Score: 95.1 bits (235), Expect = 3.710e-22
Identity = 51/114 (44.74%), Postives = 71/114 (62.28%), Query Frame = 0

Query:    1 ERFFGLKNFGNTCYCNSVLQALYFCKPLRYHLAQVSEENASNSGDWGVMNDESVKAEKADNENSVLFQLAELFSSISKQKRRSGQLAPKEFLRTIRERNKKFRGKMQQVLLFFL 114
            ER+FGL+NFGNTCYCNSVLQALYFC   R  L +    N S S                D E ++L  LA+LFS IS QK+++G +APK F++ ++++N+ FR  M QV+ + +
Sbjct:   61 ERYFGLENFGNTCYCNSVLQALYFCVSFREQLLEYYANNKSAS----------------DGEENMLTCLADLFSQISNQKKKTGVIAPKRFIQRLKKQNELFRSYMHQVINYVM 158

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BLAST of mRNA_H-elongata_contig82099.15874.1 vs. uniprot
Match: A0A0K9QYR6_SPIOL (USP domain-containing protein n=4 Tax=Chenopodiaceae TaxID=1804623 RepID=A0A0K9QYR6_SPIOL)

HSP 1 Score: 97.8 bits (242), Expect = 7.620e-22
Identity = 54/114 (47.37%), Postives = 72/114 (63.16%), Query Frame = 0

Query:    1 ERFFGLKNFGNTCYCNSVLQALYFCKPLRYHLAQVSEENASNSGDWGVMNDESVKAEKADNENSVLFQLAELFSSISKQKRRSGQLAPKEFLRTIRERNKKFRGKMQQVLLFFL 114
            ER+FGL+NFGNTCYCNSVLQALYFC P R  L +  E+N +                 AD E ++L  LA+LF+ IS QK+++G +APK F++ +R+ N+ FRG M Q    FL
Sbjct:   20 ERYFGLENFGNTCYCNSVLQALYFCVPFRDKLLEYYEKNKN----------------PADPEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRVRKENELFRGYMHQDAHEFL 117

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BLAST of mRNA_H-elongata_contig82099.15874.1 vs. uniprot
Match: A0A7C8YLA1_OPUST (USP domain-containing protein n=2 Tax=Pentapetalae TaxID=1437201 RepID=A0A7C8YLA1_OPUST)

HSP 1 Score: 92.4 bits (228), Expect = 9.620e-22
Identity = 48/111 (43.24%), Postives = 69/111 (62.16%), Query Frame = 0

Query:    1 ERFFGLKNFGNTCYCNSVLQALYFCKPLRYHLAQVSEENASNSGDWGVMNDESVKAEKADNENSVLFQLAELFSSISKQKRRSGQLAPKEFLRTIRERNKKFRGKMQQVLL 111
            ER+FGL+NFGNTCYCNSVLQALYFC P R  L +    N +                  D E ++L  LA+LF+ +S QK+++G +APK F++ ++++N+ FR  M Q+ L
Sbjct:   20 ERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKNT----------------VDAEENLLTCLADLFTQVSSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQIPL 114

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BLAST of mRNA_H-elongata_contig82099.15874.1 vs. uniprot
Match: A0A3B6IVM4_WHEAT (USP domain-containing protein n=2 Tax=Triticum TaxID=4564 RepID=A0A3B6IVM4_WHEAT)

HSP 1 Score: 95.5 bits (236), Expect = 1.140e-21
Identity = 53/114 (46.49%), Postives = 70/114 (61.40%), Query Frame = 0

Query:    1 ERFFGLKNFGNTCYCNSVLQALYFCKPLRYHLAQVSEENASNSGDWGVMNDESVKAEKADNENSVLFQLAELFSSISKQKRRSGQLAPKEFLRTIRERNKKFRGKMQQVLLFFL 114
            ER+FGL+NFGNTCYCNSVLQALYFC P R  L +    N S S                D E ++L  LA+LFS IS QK+++G +APK F++ ++++N+ FR  M Q    FL
Sbjct:   20 ERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKSAS----------------DGEENMLTCLADLFSQISNQKKKTGVIAPKRFIQRLKKQNELFRSYMHQDAHEFL 117

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BLAST of mRNA_H-elongata_contig82099.15874.1 vs. uniprot
Match: C6SWJ8_SOYBN (USP domain-containing protein n=1 Tax=Glycine max TaxID=3847 RepID=C6SWJ8_SOYBN)

HSP 1 Score: 92.8 bits (229), Expect = 1.280e-21
Identity = 52/114 (45.61%), Postives = 70/114 (61.40%), Query Frame = 0

Query:    1 ERFFGLKNFGNTCYCNSVLQALYFCKPLRYHLAQVSEENASNSGDWGVMNDESVKAEKADNENSVLFQLAELFSSISKQKRRSGQLAPKEFLRTIRERNKKFRGKMQQVLLFFL 114
            ER+FGL+NFGNTCYCNSVLQALYFC P R  L +    N S +                D E ++L  LA+LFS IS QK+++G +APK F++ ++++N+ FR  M Q    FL
Sbjct:   20 ERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKSIT----------------DAEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFL 117

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig82099.15874.1 vs. uniprot

BLAST of mRNA_H-elongata_contig82099.15874.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LBJ3_ECTSI	8.190e-33	64.81	Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Ecto...	[more]
A0A453IYV5_AEGTS	8.230e-24	45.61	USP domain-containing protein n=1 Tax=Aegilops tau...	[more]
A0A5A7QT99_STRAF	8.260e-23	49.12	Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Orob...	[more]
A0A835Z200_9STRA	1.050e-22	51.85	Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Trib...	[more]
A0A834ZPR8_9MAGN	1.880e-22	46.79	USP domain-containing protein n=1 Tax=Tetracentron...	[more]
A0A453QTS9_AEGTS	3.710e-22	44.74	USP domain-containing protein n=1 Tax=Aegilops tau...	[more]
A0A0K9QYR6_SPIOL	7.620e-22	47.37	USP domain-containing protein n=4 Tax=Chenopodiace...	[more]
A0A7C8YLA1_OPUST	9.620e-22	43.24	USP domain-containing protein n=2 Tax=Pentapetalae...	[more]
A0A3B6IVM4_WHEAT	1.140e-21	46.49	USP domain-containing protein n=2 Tax=Triticum Tax...	[more]
C6SWJ8_SOYBN	1.280e-21	45.61	USP domain-containing protein n=1 Tax=Glycine max ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001394	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	PFAM	PF00443	UCH	coord: 4..108 e-value: 7.0E-20 score: 71.6
None	No IPR available	GENE3D	3.90.70.10		coord: 1..115 e-value: 6.9E-24 score: 86.4
None	No IPR available	PANTHER	PTHR24006:SF756		coord: 1..109
None	No IPR available	PANTHER	PTHR24006	FAMILY NOT NAMED	coord: 1..109
IPR018200	Ubiquitin specific protease, conserved site	PROSITE	PS00972	USP_1	coord: 5..20
IPR028889	Ubiquitin specific protease domain	PROSITE	PS50235	USP_3	coord: 4..116 score: 17.114
IPR038765	Papain-like cysteine peptidase superfamily	SUPERFAMILY	54001	Cysteine proteinases	coord: 3..108

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig82099	contig	H-elongata_contig82099:731..1961 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig82099.15874.1	mRNA_H-elongata_contig82099.15874.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig82099 731..1961 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig82099.15874.1 ID=prot_H-elongata_contig82099.15874.1|Name=mRNA_H-elongata_contig82099.15874.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=117bp
ERFFGLKNFGNTCYCNSVLQALYFCKPLRYHLAQVSEENASNSGDWGVMN
DESVKAEKADNENSVLFQLAELFSSISKQKRRSGQLAPKEFLRTIRERNK
KFRGKMQQVLLFFLRR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001394	Peptidase_C19_UCH
IPR018200	USP_CS
IPR028889	USP_dom
IPR038765	Papain-like_cys_pep_sf