prot_H-elongata_contig81775.15843.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig81775.15843.1
Unique Name	prot_H-elongata_contig81775.15843.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	117

Homology

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BLAST of mRNA_H-elongata_contig81775.15843.1 vs. uniprot
Match: D7FNI3_ECTSI (Clathrin assembly complex, medium subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNI3_ECTSI)

HSP 1 Score: 190 bits (483), Expect = 9.150e-57
Identity = 91/105 (86.67%), Postives = 95/105 (90.48%), Query Frame = 0

Query:    1 PCWQTPKHSLIHVYRDDVFLLATCTEDVNALGVIEFLHRVIEIMGDYFGGNVDEGAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIEPPTTFARFVNATTGK 105
            P  QT KH+LIHVYRDDVFLLATCTEDV+ LGVIEFLHRV++IMGDYFGGNVDE AIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMI PPTTF R V A TGK
Sbjct:   47 PILQTSKHNLIHVYRDDVFLLATCTEDVSTLGVIEFLHRVLDIMGDYFGGNVDESAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIRPPTTFVRMVTAATGK 151

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BLAST of mRNA_H-elongata_contig81775.15843.1 vs. uniprot
Match: A0A662XRX9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XRX9_9STRA)

HSP 1 Score: 127 bits (318), Expect = 1.920e-34
Identity = 61/107 (57.01%), Postives = 80/107 (74.77%), Query Frame = 0

Query:    1 PCWQTPKHSLIHVYRDDVFLLATCTEDVNALGVIEFLHRVIEIMGDYFGGNVDEGAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIEPPTTFARFVNATTGKVR 107
            P   T K+ L+ V+RDD+F+LA  T +++ L VIEFLHRV+ +  DYFG N DE ++K++FS VYQLLEEM+DNG+PLTTEPNALKAM+ PP+T  R     +GK R
Sbjct:   54 PIITTSKYYLVSVFRDDLFVLAVVTNEISPLFVIEFLHRVLAVFRDYFG-NFDENSMKDNFSTVYQLLEEMLDNGYPLTTEPNALKAMVAPPSTANRIAAMVSGKSR 159

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BLAST of mRNA_H-elongata_contig81775.15843.1 vs. uniprot
Match: A0A7S2G8T1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G8T1_9STRA)

HSP 1 Score: 125 bits (313), Expect = 1.060e-33
Identity = 64/105 (60.95%), Postives = 80/105 (76.19%), Query Frame = 0

Query:    1 PCWQTPKHSLIHVYRDDVFLLATCTEDVNALGVIEFLHRVIEIMGDYFGGNVDEGAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIEPPTTFARFVNATTGK 105
            P   T K+ LI V+RDDVFL+A+ T +V  L VIEFLHR+I+I  +YFG +V+E  IK++FS  YQLLEEMMDNG+PLTTEPNALKAMI+PP+   R  +  TGK
Sbjct:   60 PIIYTSKYYLISVFRDDVFLIASVTAEVPPLLVIEFLHRIIDIYTEYFG-SVEEQNIKDNFSTCYQLLEEMMDNGYPLTTEPNALKAMIKPPSVMGRVHSYATGK 163

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BLAST of mRNA_H-elongata_contig81775.15843.1 vs. uniprot
Match: A0A2D4CF09_PYTIN (p-3 complex subunit mu, putative (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CF09_PYTIN)

HSP 1 Score: 123 bits (309), Expect = 1.670e-33
Identity = 60/107 (56.07%), Postives = 78/107 (72.90%), Query Frame = 0

Query:    1 PCWQTPKHSLIHVYRDDVFLLATCTEDVNALGVIEFLHRVIEIMGDYFGGNVDEGAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIEPPTTFARFVNATTGKVR 107
            P   T K+ L+ V+RDD+FLLA  T ++  L VIEFLHRV+ +  DYFG   DE ++K++FS VYQLLEEM+DNG+PLTTEPNA+KAM+ PP+T  R     +GK R
Sbjct:   47 PIIVTSKYYLVSVFRDDLFLLAVVTNEIAPLFVIEFLHRVLAVFRDYFG-TFDENSMKDNFSTVYQLLEEMLDNGYPLTTEPNAMKAMVAPPSTANRIAAMVSGKSR 152

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BLAST of mRNA_H-elongata_contig81775.15843.1 vs. uniprot
Match: F0YHF4_AURAN (MHD domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHF4_AURAN)

HSP 1 Score: 124 bits (312), Expect = 4.610e-33
Identity = 59/105 (56.19%), Postives = 79/105 (75.24%), Query Frame = 0

Query:    1 PCWQTPKHSLIHVYRDDVFLLATCTEDVNALGVIEFLHRVIEIMGDYFGGNVDEGAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIEPPTTFARFVNATTGK 105
            P    PKH L+ ++R+DV+++AT  +DV  L VIEFLHR+I+I  +YFG   DEG+IK++FS+VYQLLEEM+DNG+PL TEPNALKAMI+P +   R     TG+
Sbjct:   47 PILYRPKHYLVSIFREDVYVIATLAKDVAPLLVIEFLHRIIDIFVEYFGA-ADEGSIKDNFSVVYQLLEEMLDNGNPLMTEPNALKAMIKPQSVMGRLQAVATGR 150

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BLAST of mRNA_H-elongata_contig81775.15843.1 vs. uniprot
Match: H3G7T8_PHYRM (MHD domain-containing protein n=28 Tax=Peronosporaceae TaxID=4777 RepID=H3G7T8_PHYRM)

HSP 1 Score: 127 bits (319), Expect = 1.040e-32
Identity = 62/107 (57.94%), Postives = 80/107 (74.77%), Query Frame = 0

Query:    1 PCWQTPKHSLIHVYRDDVFLLATCTEDVNALGVIEFLHRVIEIMGDYFGGNVDEGAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIEPPTTFARFVNATTGKVR 107
            P   T K+ L+ V+RDD+F+LA  T +V+ L VIEFLHRV+ +  DYFG N DE ++K++FS VYQLLEEM+DNG+PLTTEPNALKAM+ PP+T  R     +GK R
Sbjct:   35 PIITTSKYYLVSVFRDDLFVLAVVTNEVSPLFVIEFLHRVLAVFRDYFG-NFDENSMKDNFSTVYQLLEEMLDNGYPLTTEPNALKAMVAPPSTANRIAAMVSGKSR 140

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BLAST of mRNA_H-elongata_contig81775.15843.1 vs. uniprot
Match: F0YKX1_AURAN (MHD domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKX1_AURAN)

HSP 1 Score: 127 bits (319), Expect = 1.290e-32
Identity = 61/105 (58.10%), Postives = 80/105 (76.19%), Query Frame = 0

Query:    1 PCWQTPKHSLIHVYRDDVFLLATCTEDVNALGVIEFLHRVIEIMGDYFGGNVDEGAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIEPPTTFARFVNATTGK 105
            P   T K+ L+ V RDD++++AT  +DV  L VIEFLHRV++I  +YFG   DEG+IK++FS+VYQLLEEM+DNG+PLTTEPNALKAMI+PP+   R     TG+
Sbjct:   47 PILHTSKYYLVSVSRDDIYVIATLAKDVAPLLVIEFLHRVVDIFVEYFGA-ADEGSIKDNFSMVYQLLEEMLDNGNPLTTEPNALKAMIKPPSVMGRLQAVATGR 150

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BLAST of mRNA_H-elongata_contig81775.15843.1 vs. uniprot
Match: A0A835YUG2_9STRA (Mu homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUG2_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.340e-32
Identity = 65/105 (61.90%), Postives = 77/105 (73.33%), Query Frame = 0

Query:    1 PCWQTPKHSLIHVYRDDVFLLATCTEDVNALGVIEFLHRVIEIMGDYFGGNVDEGAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIEPPTTFARFVNATTGK 105
            P     K  +I VYR D+FL+A   ++   L  IEFLHRV++I+ DY G  VDE +IKESFSLVYQLLEEMMDNGHP+TTEPNALKAMI+PPT   R V A TG+
Sbjct:   47 PIMAVNKGFIISVYRYDMFLIAKVQQETPPLLCIEFLHRVLDILADYLGA-VDETSIKESFSLVYQLLEEMMDNGHPMTTEPNALKAMIKPPTVMGRVVAAATGR 150

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BLAST of mRNA_H-elongata_contig81775.15843.1 vs. uniprot
Match: W4FFE6_9STRA (MHD domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FFE6_9STRA)

HSP 1 Score: 124 bits (312), Expect = 3.410e-32
Identity = 61/107 (57.01%), Postives = 78/107 (72.90%), Query Frame = 0

Query:    1 PCWQTPKHSLIHVYRDDVFLLATCTEDVNALGVIEFLHRVIEIMGDYFGGNVDEGAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIEPPTTFARFVNATTGKVR 107
            P   T KH  I V+R+ +FLLA  T +++ L VIEFLHRV+ +  DYFG + +E AIK++FS VYQLLEEM+DNG+PLTTEPNALKAM+ PP+T  R     +GK R
Sbjct:   47 PVIATSKHYFISVFREGLFLLAVVTNEISPLFVIEFLHRVVAVFRDYFG-SFEESAIKDNFSTVYQLLEEMLDNGYPLTTEPNALKAMVAPPSTVNRIAAIVSGKSR 152

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BLAST of mRNA_H-elongata_contig81775.15843.1 vs. uniprot
Match: A0A7S2GKZ3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GKZ3_9STRA)

HSP 1 Score: 125 bits (315), Expect = 4.840e-32
Identity = 63/99 (63.64%), Postives = 77/99 (77.78%), Query Frame = 0

Query:    7 KHSLIHVYRDDVFLLATCTEDVNALGVIEFLHRVIEIMGDYFGGNVDEGAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIEPPTTFARFVNATTGK 105
            K+ LI VYRDD+F++A+   +V  L VIEFLHR+I I  +YFG +V+E AIKE+FS  YQLLEEMMDNG+PLTTEPNALKAMI+PP+   R   A TGK
Sbjct:   53 KYYLISVYRDDLFIIASVVAEVAPLLVIEFLHRIITIFTEYFG-SVEETAIKENFSTCYQLLEEMMDNGYPLTTEPNALKAMIKPPSVMGRLTAAATGK 150

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig81775.15843.1 vs. uniprot

BLAST of mRNA_H-elongata_contig81775.15843.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FNI3_ECTSI	9.150e-57	86.67	Clathrin assembly complex, medium subunit n=1 Tax=...	[more]
A0A662XRX9_9STRA	1.920e-34	57.01	Uncharacterized protein (Fragment) n=1 Tax=Nothoph...	[more]
A0A7S2G8T1_9STRA	1.060e-33	60.95	Hypothetical protein (Fragment) n=1 Tax=Florenciel...	[more]
A0A2D4CF09_PYTIN	1.670e-33	56.07	p-3 complex subunit mu, putative (Fragment) n=1 Ta...	[more]
F0YHF4_AURAN	4.610e-33	56.19	MHD domain-containing protein n=1 Tax=Aureococcus ...	[more]
H3G7T8_PHYRM	1.040e-32	57.94	MHD domain-containing protein n=28 Tax=Peronospora...	[more]
F0YKX1_AURAN	1.290e-32	58.10	MHD domain-containing protein n=1 Tax=Aureococcus ...	[more]
A0A835YUG2_9STRA	1.340e-32	61.90	Mu homology domain-containing protein n=1 Tax=Trib...	[more]
W4FFE6_9STRA	3.410e-32	57.01	MHD domain-containing protein n=1 Tax=Aphanomyces ...	[more]
A0A7S2GKZ3_9STRA	4.840e-32	63.64	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022775	AP complex, mu/sigma subunit	PFAM	PF01217	Clat_adaptor_s	coord: 19..85 e-value: 4.4E-7 score: 29.9
None	No IPR available	GENE3D	3.30.450.60		coord: 1..94 e-value: 3.3E-29 score: 103.5
None	No IPR available	PANTHER	PTHR10529:SF340	CARMINE, ISOFORM A	coord: 1..98
None	No IPR available	PANTHER	PTHR10529	LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED	coord: 1..98
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 2..92

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig81775	contig	H-elongata_contig81775:1981..2660 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig81775.15843.1	mRNA_H-elongata_contig81775.15843.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig81775 1981..2660 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig81775.15843.1 ID=prot_H-elongata_contig81775.15843.1|Name=mRNA_H-elongata_contig81775.15843.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=117bp
PCWQTPKHSLIHVYRDDVFLLATCTEDVNALGVIEFLHRVIEIMGDYFGG
NVDEGAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIEPPTTFARFVN
ATTGKVRWLGAEKGYT*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR022775	AP_mu_sigma_su
IPR011012	Longin-like_dom_sf