prot_H-elongata_contig81775.15843.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig81775.15843.1
Unique Nameprot_H-elongata_contig81775.15843.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length117
Homology
BLAST of mRNA_H-elongata_contig81775.15843.1 vs. uniprot
Match: D7FNI3_ECTSI (Clathrin assembly complex, medium subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNI3_ECTSI)

HSP 1 Score: 190 bits (483), Expect = 9.150e-57
Identity = 91/105 (86.67%), Postives = 95/105 (90.48%), Query Frame = 0
Query:    1 PCWQTPKHSLIHVYRDDVFLLATCTEDVNALGVIEFLHRVIEIMGDYFGGNVDEGAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIEPPTTFARFVNATTGK 105
            P  QT KH+LIHVYRDDVFLLATCTEDV+ LGVIEFLHRV++IMGDYFGGNVDE AIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMI PPTTF R V A TGK
Sbjct:   47 PILQTSKHNLIHVYRDDVFLLATCTEDVSTLGVIEFLHRVLDIMGDYFGGNVDESAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIRPPTTFVRMVTAATGK 151          
BLAST of mRNA_H-elongata_contig81775.15843.1 vs. uniprot
Match: A0A662XRX9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XRX9_9STRA)

HSP 1 Score: 127 bits (318), Expect = 1.920e-34
Identity = 61/107 (57.01%), Postives = 80/107 (74.77%), Query Frame = 0
Query:    1 PCWQTPKHSLIHVYRDDVFLLATCTEDVNALGVIEFLHRVIEIMGDYFGGNVDEGAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIEPPTTFARFVNATTGKVR 107
            P   T K+ L+ V+RDD+F+LA  T +++ L VIEFLHRV+ +  DYFG N DE ++K++FS VYQLLEEM+DNG+PLTTEPNALKAM+ PP+T  R     +GK R
Sbjct:   54 PIITTSKYYLVSVFRDDLFVLAVVTNEISPLFVIEFLHRVLAVFRDYFG-NFDENSMKDNFSTVYQLLEEMLDNGYPLTTEPNALKAMVAPPSTANRIAAMVSGKSR 159          
BLAST of mRNA_H-elongata_contig81775.15843.1 vs. uniprot
Match: A0A7S2G8T1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G8T1_9STRA)

HSP 1 Score: 125 bits (313), Expect = 1.060e-33
Identity = 64/105 (60.95%), Postives = 80/105 (76.19%), Query Frame = 0
Query:    1 PCWQTPKHSLIHVYRDDVFLLATCTEDVNALGVIEFLHRVIEIMGDYFGGNVDEGAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIEPPTTFARFVNATTGK 105
            P   T K+ LI V+RDDVFL+A+ T +V  L VIEFLHR+I+I  +YFG +V+E  IK++FS  YQLLEEMMDNG+PLTTEPNALKAMI+PP+   R  +  TGK
Sbjct:   60 PIIYTSKYYLISVFRDDVFLIASVTAEVPPLLVIEFLHRIIDIYTEYFG-SVEEQNIKDNFSTCYQLLEEMMDNGYPLTTEPNALKAMIKPPSVMGRVHSYATGK 163          
BLAST of mRNA_H-elongata_contig81775.15843.1 vs. uniprot
Match: A0A2D4CF09_PYTIN (p-3 complex subunit mu, putative (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CF09_PYTIN)

HSP 1 Score: 123 bits (309), Expect = 1.670e-33
Identity = 60/107 (56.07%), Postives = 78/107 (72.90%), Query Frame = 0
Query:    1 PCWQTPKHSLIHVYRDDVFLLATCTEDVNALGVIEFLHRVIEIMGDYFGGNVDEGAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIEPPTTFARFVNATTGKVR 107
            P   T K+ L+ V+RDD+FLLA  T ++  L VIEFLHRV+ +  DYFG   DE ++K++FS VYQLLEEM+DNG+PLTTEPNA+KAM+ PP+T  R     +GK R
Sbjct:   47 PIIVTSKYYLVSVFRDDLFLLAVVTNEIAPLFVIEFLHRVLAVFRDYFG-TFDENSMKDNFSTVYQLLEEMLDNGYPLTTEPNAMKAMVAPPSTANRIAAMVSGKSR 152          
BLAST of mRNA_H-elongata_contig81775.15843.1 vs. uniprot
Match: F0YHF4_AURAN (MHD domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHF4_AURAN)

HSP 1 Score: 124 bits (312), Expect = 4.610e-33
Identity = 59/105 (56.19%), Postives = 79/105 (75.24%), Query Frame = 0
Query:    1 PCWQTPKHSLIHVYRDDVFLLATCTEDVNALGVIEFLHRVIEIMGDYFGGNVDEGAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIEPPTTFARFVNATTGK 105
            P    PKH L+ ++R+DV+++AT  +DV  L VIEFLHR+I+I  +YFG   DEG+IK++FS+VYQLLEEM+DNG+PL TEPNALKAMI+P +   R     TG+
Sbjct:   47 PILYRPKHYLVSIFREDVYVIATLAKDVAPLLVIEFLHRIIDIFVEYFGA-ADEGSIKDNFSVVYQLLEEMLDNGNPLMTEPNALKAMIKPQSVMGRLQAVATGR 150          
BLAST of mRNA_H-elongata_contig81775.15843.1 vs. uniprot
Match: H3G7T8_PHYRM (MHD domain-containing protein n=28 Tax=Peronosporaceae TaxID=4777 RepID=H3G7T8_PHYRM)

HSP 1 Score: 127 bits (319), Expect = 1.040e-32
Identity = 62/107 (57.94%), Postives = 80/107 (74.77%), Query Frame = 0
Query:    1 PCWQTPKHSLIHVYRDDVFLLATCTEDVNALGVIEFLHRVIEIMGDYFGGNVDEGAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIEPPTTFARFVNATTGKVR 107
            P   T K+ L+ V+RDD+F+LA  T +V+ L VIEFLHRV+ +  DYFG N DE ++K++FS VYQLLEEM+DNG+PLTTEPNALKAM+ PP+T  R     +GK R
Sbjct:   35 PIITTSKYYLVSVFRDDLFVLAVVTNEVSPLFVIEFLHRVLAVFRDYFG-NFDENSMKDNFSTVYQLLEEMLDNGYPLTTEPNALKAMVAPPSTANRIAAMVSGKSR 140          
BLAST of mRNA_H-elongata_contig81775.15843.1 vs. uniprot
Match: F0YKX1_AURAN (MHD domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKX1_AURAN)

HSP 1 Score: 127 bits (319), Expect = 1.290e-32
Identity = 61/105 (58.10%), Postives = 80/105 (76.19%), Query Frame = 0
Query:    1 PCWQTPKHSLIHVYRDDVFLLATCTEDVNALGVIEFLHRVIEIMGDYFGGNVDEGAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIEPPTTFARFVNATTGK 105
            P   T K+ L+ V RDD++++AT  +DV  L VIEFLHRV++I  +YFG   DEG+IK++FS+VYQLLEEM+DNG+PLTTEPNALKAMI+PP+   R     TG+
Sbjct:   47 PILHTSKYYLVSVSRDDIYVIATLAKDVAPLLVIEFLHRVVDIFVEYFGA-ADEGSIKDNFSMVYQLLEEMLDNGNPLTTEPNALKAMIKPPSVMGRLQAVATGR 150          
BLAST of mRNA_H-elongata_contig81775.15843.1 vs. uniprot
Match: A0A835YUG2_9STRA (Mu homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUG2_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.340e-32
Identity = 65/105 (61.90%), Postives = 77/105 (73.33%), Query Frame = 0
Query:    1 PCWQTPKHSLIHVYRDDVFLLATCTEDVNALGVIEFLHRVIEIMGDYFGGNVDEGAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIEPPTTFARFVNATTGK 105
            P     K  +I VYR D+FL+A   ++   L  IEFLHRV++I+ DY G  VDE +IKESFSLVYQLLEEMMDNGHP+TTEPNALKAMI+PPT   R V A TG+
Sbjct:   47 PIMAVNKGFIISVYRYDMFLIAKVQQETPPLLCIEFLHRVLDILADYLGA-VDETSIKESFSLVYQLLEEMMDNGHPMTTEPNALKAMIKPPTVMGRVVAAATGR 150          
BLAST of mRNA_H-elongata_contig81775.15843.1 vs. uniprot
Match: W4FFE6_9STRA (MHD domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FFE6_9STRA)

HSP 1 Score: 124 bits (312), Expect = 3.410e-32
Identity = 61/107 (57.01%), Postives = 78/107 (72.90%), Query Frame = 0
Query:    1 PCWQTPKHSLIHVYRDDVFLLATCTEDVNALGVIEFLHRVIEIMGDYFGGNVDEGAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIEPPTTFARFVNATTGKVR 107
            P   T KH  I V+R+ +FLLA  T +++ L VIEFLHRV+ +  DYFG + +E AIK++FS VYQLLEEM+DNG+PLTTEPNALKAM+ PP+T  R     +GK R
Sbjct:   47 PVIATSKHYFISVFREGLFLLAVVTNEISPLFVIEFLHRVVAVFRDYFG-SFEESAIKDNFSTVYQLLEEMLDNGYPLTTEPNALKAMVAPPSTVNRIAAIVSGKSR 152          
BLAST of mRNA_H-elongata_contig81775.15843.1 vs. uniprot
Match: A0A7S2GKZ3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GKZ3_9STRA)

HSP 1 Score: 125 bits (315), Expect = 4.840e-32
Identity = 63/99 (63.64%), Postives = 77/99 (77.78%), Query Frame = 0
Query:    7 KHSLIHVYRDDVFLLATCTEDVNALGVIEFLHRVIEIMGDYFGGNVDEGAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIEPPTTFARFVNATTGK 105
            K+ LI VYRDD+F++A+   +V  L VIEFLHR+I I  +YFG +V+E AIKE+FS  YQLLEEMMDNG+PLTTEPNALKAMI+PP+   R   A TGK
Sbjct:   53 KYYLISVYRDDLFIIASVVAEVAPLLVIEFLHRIITIFTEYFG-SVEETAIKENFSTCYQLLEEMMDNGYPLTTEPNALKAMIKPPSVMGRLTAAATGK 150          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81775.15843.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNI3_ECTSI9.150e-5786.67Clathrin assembly complex, medium subunit n=1 Tax=... [more]
A0A662XRX9_9STRA1.920e-3457.01Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
A0A7S2G8T1_9STRA1.060e-3360.95Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A2D4CF09_PYTIN1.670e-3356.07p-3 complex subunit mu, putative (Fragment) n=1 Ta... [more]
F0YHF4_AURAN4.610e-3356.19MHD domain-containing protein n=1 Tax=Aureococcus ... [more]
H3G7T8_PHYRM1.040e-3257.94MHD domain-containing protein n=28 Tax=Peronospora... [more]
F0YKX1_AURAN1.290e-3258.10MHD domain-containing protein n=1 Tax=Aureococcus ... [more]
A0A835YUG2_9STRA1.340e-3261.90Mu homology domain-containing protein n=1 Tax=Trib... [more]
W4FFE6_9STRA3.410e-3257.01MHD domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A7S2GKZ3_9STRA4.840e-3263.64Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022775AP complex, mu/sigma subunitPFAMPF01217Clat_adaptor_scoord: 19..85
e-value: 4.4E-7
score: 29.9
NoneNo IPR availableGENE3D3.30.450.60coord: 1..94
e-value: 3.3E-29
score: 103.5
NoneNo IPR availablePANTHERPTHR10529:SF340CARMINE, ISOFORM Acoord: 1..98
NoneNo IPR availablePANTHERPTHR10529LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATEDcoord: 1..98
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 2..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig81775contigH-elongata_contig81775:1981..2660 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig81775.15843.1mRNA_H-elongata_contig81775.15843.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig81775 1981..2660 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig81775.15843.1 ID=prot_H-elongata_contig81775.15843.1|Name=mRNA_H-elongata_contig81775.15843.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=117bp
PCWQTPKHSLIHVYRDDVFLLATCTEDVNALGVIEFLHRVIEIMGDYFGG
NVDEGAIKESFSLVYQLLEEMMDNGHPLTTEPNALKAMIEPPTTFARFVN
ATTGKVRWLGAEKGYT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022775AP_mu_sigma_su
IPR011012Longin-like_dom_sf