prot_H-elongata_contig81699.15835.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig81699.15835.1
Unique Nameprot_H-elongata_contig81699.15835.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length135
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81699.15835.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 21..55
e-value: 42.0
score: 9.5
coord: 91..125
e-value: 40.0
score: 9.7
coord: 56..90
e-value: 0.11
score: 21.7
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 91..123
e-value: 18.0
score: 11.4
coord: 21..53
e-value: 72.0
score: 6.2
coord: 56..88
e-value: 9.1
score: 14.0
NoneNo IPR availablePFAMPF13432TPR_16coord: 72..125
e-value: 2.2E-5
score: 25.0
NoneNo IPR availablePANTHERPTHR44809FAMILY NOT NAMEDcoord: 3..131
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..69
e-value: 6.5E-16
score: 60.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 70..135
e-value: 1.9E-12
score: 48.8
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 2..132
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..135
score: 26.07

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig81699contigH-elongata_contig81699:105..2190 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig81699.15835.1mRNA_H-elongata_contig81699.15835.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig81699 105..2190 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig81699.15835.1 ID=prot_H-elongata_contig81699.15835.1|Name=mRNA_H-elongata_contig81699.15835.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=135bp
QDFKQAEFHYSEALRINPRAAFAHNSLGHLLHHRYKEFEAAEKHYRRAIR
LQWRSPDAHYNLGCLLQHQKEDLVEAERHYRHAIKCDPKHGMAQYNLGWV
LEKVKNDLQGAGKCYQAAIDADPEDKDARRRLAKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom